prot_Ecto-sp13_S_contig70.18042.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig70.18042.1
Unique Nameprot_Ecto-sp13_S_contig70.18042.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length334
Homology
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BLAST of mRNA_Ecto-sp13_S_contig70.18042.1 vs. uniprot
Match: D8LKZ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ8_ECTSI)

HSP 1 Score: 540 bits (1392), Expect = 3.920e-192
Identity = 316/333 (94.89%), Postives = 318/333 (95.50%), Query Frame = 0 
Query:    1 MSCNRGAVVSVQYRDRAWDIKLNSAVNTACLERDTATLALELQAALNLSTPPVGLRLRVAPGAQAVICPLSAVIACPSYIATAYQGMSWFPLLEGGGDDHQEAPPNAPPATPQTQLPAPPSDDPLLPPPLGSPLDHELSFLATGGGFTASPSEGCGRPLTAPPGDRTRGITRPRPGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSHSGSPAWGSPHGFRCEETTTTAPEDAGARRPATAPVLRRQPSSNLSGSRNENGAFGERFGRGGSVEVNEETGGVAAAHHRPIPDGSGLGEDGRAVGGDVDWGWCGVGPARECWA 333
            MS NRGAVVSVQY D AWDIKLN A NTACLERDTATLALELQAALNLSTPPVGLRLRVAPGAQAVICPLSAVIACPSYIATAYQGMSWFPLLEGGGDDHQEAPPNAPPA PQTQLPAPPSDDPLLPPPLGSPLDHELSFLATGGGFTASPSEGCGRPLTAPPGDRTRG+TRP PGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSHSGSPAWGSPHGFRCEETTTT  EDAGARRPATAP LRRQPSSNLSGSRNENG FGERFGRGGSVEVNEETGGVAAAHHRP+PDG GLG DGRAVGGDVDWGWCG GP RECWA
Sbjct:    1 MSFNRGAVVSVQYGDCAWDIKLNLAANTACLERDTATLALELQAALNLSTPPVGLRLRVAPGAQAVICPLSAVIACPSYIATAYQGMSWFPLLEGGGDDHQEAPPNAPPAAPQTQLPAPPSDDPLLPPPLGSPLDHELSFLATGGGFTASPSEGCGRPLTAPPGDRTRGMTRPHPGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSHSGSPAWGSPHGFRCEETTTTTAEDAGARRPATAPALRRQPSSNLSGSRNENGVFGERFGRGGSVEVNEETGGVAAAHHRPMPDGGGLGGDGRAVGGDVDWGWCGAGPTRECWA 333
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70.18042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKZ8_ECTSI3.920e-19294.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig70contigEcto-sp13_S_contig70:28520..30136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig70.18042.1mRNA_Ecto-sp13_S_contig70.18042.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig70 28242..30696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig70.18042.1 ID=prot_Ecto-sp13_S_contig70.18042.1|Name=mRNA_Ecto-sp13_S_contig70.18042.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=334bp
MSCNRGAVVSVQYRDRAWDIKLNSAVNTACLERDTATLALELQAALNLST
PPVGLRLRVAPGAQAVICPLSAVIACPSYIATAYQGMSWFPLLEGGGDDH
QEAPPNAPPATPQTQLPAPPSDDPLLPPPLGSPLDHELSFLATGGGFTAS
PSEGCGRPLTAPPGDRTRGITRPRPGRREGLGRPMSATPSDKSFGMRRIR
PGKSEGFGRPVTALPSDHSHSGSPAWGSPHGFRCEETTTTAPEDAGARRP
ATAPVLRRQPSSNLSGSRNENGAFGERFGRGGSVEVNEETGGVAAAHHRP
IPDGSGLGEDGRAVGGDVDWGWCGVGPARECWA*
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