mRNA_Ecto-sp13_S_contig70.18040.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig70.18040.1
Unique NamemRNA_Ecto-sp13_S_contig70.18040.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig70.18040.1 vs. uniprot
Match: A0A6H5JKJ0_9PHAE (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ0_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 3.210e-93
Identity = 218/245 (88.98%), Postives = 220/245 (89.80%), Query Frame = 1 
Query:    1 MADAPKKGSGRVRKPQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GAGMQNPSPRTHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIGLPGMGFQHPLPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 729
            MADAPKKGSGRVRKPQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     GAGMQNP PRTHP                   XXXXXXXXXXXXXXXXXXXXXXR+GLPGMGFQHPLPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAE+RQDAKLDWLFQDLS
Sbjct:    1 MADAPKKGSGRVRKPQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVVGGAGMQNPPPRTHPPNPYPPGQQQQQVMVYPQHXXXXXXXXXXXXXXXXXXXXXXRMGLPGMGFQHPLPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEDRQDAKLDWLFQDLS 245
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BLAST of mRNA_Ecto-sp13_S_contig70.18040.1 vs. uniprot
Match: D8LL00_ECTSI (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL00_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 1.510e-83
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 1 
Query:  316 IGLPGMGFQHPLPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 729
            +GLPGMGFQHP+PXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS
Sbjct:    1 MGLPGMGFQHPVPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 138
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BLAST of mRNA_Ecto-sp13_S_contig70.18040.1 vs. uniprot
Match: A0A835ZG91_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG91_9STRA)

HSP 1 Score: 144 bits (363), Expect = 5.730e-39
Identity = 79/136 (58.09%), Postives = 97/136 (71.32%), Query Frame = 1 
Query:  331 MGFQHPLPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPR-----LRRVSADEIIEAQQEASAEERQDAKLDWLFQD 723
            M    P P      +FFPG+ASL EQLDK VMVVLRDGRHLVG+MRSYDQFSNIVLEDTHERHFV  ++GDI LGLY+VRGD++VL+GE+              L+RV+ADEI++AQQE+  +     K++W F D
Sbjct:  102 MPLGRPXPPVIAPPSFFPGAASLHEQLDKVVMVVLRDGRHLVGLMRSYDQFSNIVLEDTHERHFVGALYGDIPLGLYIVRGDSVVLLGEVAAEXXXXXXXXXALLKRVTADEILQAQQESDVDP---FKVEWDFGD 234
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BLAST of mRNA_Ecto-sp13_S_contig70.18040.1 vs. uniprot
Match: A0A7S2XVC4_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVC4_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.090e-36
Identity = 70/115 (60.87%), Postives = 92/115 (80.00%), Query Frame = 1 
Query:  376 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRL-RRVSADEIIEAQQEASAEERQDAKLDWLF 717
            FF G  SL EQLDK+++VVLRDGRHLVGV+RS+DQFSN+V+E+THERH V  IFGDI LGLY+VRGD +VL+GE+DE +E + +  RRVSA+EI+ AQ+  + E++   K+ W F
Sbjct:    4 FFAGGMSLVEQLDKKILVVLRDGRHLVGVLRSFDQFSNMVMENTHERHVVEGIFGDIPLGLYIVRGDNVVLLGEVDEEKESSSQHPRRVSAEEILHAQR--NTEDK--TKVAWDF 114
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BLAST of mRNA_Ecto-sp13_S_contig70.18040.1 vs. uniprot
Match: K3WSU0_GLOUD (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU0_GLOUD)

HSP 1 Score: 132 bits (331), Expect = 1.390e-35
Identity = 64/115 (55.65%), Postives = 88/115 (76.52%), Query Frame = 1 
Query:  376 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWLF 717
            +FPGS SL EQLDK+++VVLRDGRHLVG +RS+DQFSNI+LEDT+ERH    +F DI LGL ++RGD +VL+GELDE +E + P ++R S +EI+EA++  +A+     +  W F
Sbjct:    4 YFPGSISLIEQLDKKILVVLRDGRHLVGYIRSFDQFSNIILEDTYERHVADGMFCDIELGLNIIRGDNIVLLGELDEDKERDQPHMKRASIEEILEAEERLNAKGAASVREQWDF 118
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BLAST of mRNA_Ecto-sp13_S_contig70.18040.1 vs. uniprot
Match: A0A6V1WH12_HETAK (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WH12_HETAK)

HSP 1 Score: 125 bits (315), Expect = 3.130e-33
Identity = 65/112 (58.04%), Postives = 85/112 (75.89%), Query Frame = 1 
Query:  382 PGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLF 717
            PG   L EQLDKR+++VL+DGRHL+G +RS+DQFSN+V+E+T ERH V   +GDI LGLYLVRGDA+VL+GE+D+   E   LRRVSADEI+E ++E  +     A+ DW F
Sbjct:    7 PGIMGLVEQLDKRILIVLQDGRHLIGTLRSFDQFSNVVIENTFERHVVDGCYGDIPLGLYLVRGDAVVLLGEVDDAGHEGI-LRRVSADEILELEREKESR----ARDDWDF 113
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BLAST of mRNA_Ecto-sp13_S_contig70.18040.1 vs. uniprot
Match: H3GH42_PHYRM (U6 snRNA-associated Sm-like protein LSm1 n=43 Tax=Peronosporaceae TaxID=4777 RepID=H3GH42_PHYRM)

HSP 1 Score: 123 bits (309), Expect = 2.720e-32
Identity = 58/115 (50.43%), Postives = 86/115 (74.78%), Query Frame = 1 
Query:  379 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQ 720
            FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQ+SNI+LEDT ERH    +F DI LGL ++RGD +VL+GELD  +E + P ++RV  +E++EA+++ +       +  W F+
Sbjct:    5 FPGNSSLIQQLDKQVLMVLRDGRHLVGYLRSFDQYSNIILEDTFERHVAGGLFCDIELGLNIIRGDNIVLLGELDSEKERDQPHMKRVELEEVLEAEEQLNEAGNTSVRQQWDFE 119
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BLAST of mRNA_Ecto-sp13_S_contig70.18040.1 vs. uniprot
Match: A0A7S2CG66_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG66_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.220e-31
Identity = 58/113 (51.33%), Postives = 85/113 (75.22%), Query Frame = 1 
Query:  382 PGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQ 720
            PG+ASL +QLDKR+++VLRDGRHLVG++RS+DQFSN+VLEDTHERH    +  D++LGL++VRGD +VL+GELD  +E +  L     D ++EA++ ++       K++W F+
Sbjct:   16 PGAASLVDQLDKRILIVLRDGRHLVGILRSFDQFSNMVLEDTHERHVANGLRSDMALGLFIVRGDNIVLLGELDPEKEASSGLIDAEPDVVLEAERNSAF-----TKVEWDFE 123
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BLAST of mRNA_Ecto-sp13_S_contig70.18040.1 vs. uniprot
Match: A0A0P1A9M0_PLAHL (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9M0_PLAHL)

HSP 1 Score: 121 bits (303), Expect = 2.360e-31
Identity = 59/113 (52.21%), Postives = 85/113 (75.22%), Query Frame = 1 
Query:  379 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWL 714
            FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQFSNI+LEDT+ERH    +F DI LGL ++RG  +VL+GELD  +E + P ++RV  +E++EA++  + E      L +L
Sbjct:    5 FPGNSSLIQQLDKQVLMVLRDGRHLVGNLRSFDQFSNIILEDTYERHVAGGLFCDIELGLNIIRGGNIVLLGELDSDKERDQPHMKRVKLEEVLEAEERLNEEGNTSLSLSFL 117
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BLAST of mRNA_Ecto-sp13_S_contig70.18040.1 vs. uniprot
Match: W4GB80_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GB80_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.430e-31
Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = 1 
Query:  379 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWLF 717
            FPG +SL EQLDK+++VVLRDGRHLVG++RS+DQFSNIVLE T ERH V + + DI LGLY++RG+ +VLMGELD+ +E E   L R SA+E++ A+ E + +     +  W F
Sbjct:    7 FPGVSSLVEQLDKQLLVVLRDGRHLVGIIRSFDQFSNIVLEGTCERHVVGNTYCDIPLGLYIIRGENIVLMGELDQAKEAEDVNLTRKSAEEVLTAEMEQNEQGLPTVRDAWNF 120
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70.18040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKJ0_9PHAE3.210e-9388.98U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=E... [more]
D8LL00_ECTSI1.510e-8398.55U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=E... [more]
A0A835ZG91_9STRA5.730e-3958.09U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=T... [more]
A0A7S2XVC4_9STRA3.090e-3660.87U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=F... [more]
K3WSU0_GLOUD1.390e-3555.65U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=G... [more]
A0A6V1WH12_HETAK3.130e-3358.04U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=H... [more]
H3GH42_PHYRM2.720e-3250.43U6 snRNA-associated Sm-like protein LSm1 n=43 Tax=... [more]
A0A7S2CG66_9STRA1.220e-3151.33U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=D... [more]
A0A0P1A9M0_PLAHL2.360e-3152.21U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=P... [more]
W4GB80_9STRA2.430e-3155.26U6 snRNA-associated Sm-like protein LSm1 n=2 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig70contigEcto-sp13_S_contig70:19042..20851 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score260.0
Seed ortholog evalue1.1e-66
Seed eggNOG ortholog2880.D8LL00
Preferred nameLSM1
Model size732
KEGG koko:K03952,ko:K12620,ko:K14794,ko:K16931
KEGG TC3.D.1.6
KEGG Pathwayko00190,ko01100,ko03018,ko04714,ko04723,ko04913,ko04925,ko04927,ko04932,ko04934,ko04979,ko05010,ko05012,ko05016,map00190,map01100,map03018,map04714,map04723,map04913,map04925,map04927,map04932,map04934,map04979,map05010,map05012,map05016
KEGG ModuleM00146,M00397
Hectar predicted targeting categoryother localisation
GOsGO:0000288,GO:0000290,GO:0000291,GO:0000339,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0000956,GO:0001101,GO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005845,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0006996,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008334,GO:0008380,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009628,GO:0009631,GO:0009651,GO:0009892,GO:0009987,GO:0010035,GO:0010467,GO:0010468,GO:0010494,GO:0010605,GO:0010629,GO:0010721,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019827,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030424,GO:0030425,GO:0032501,GO:0032502,GO:0032991,GO:0033962,GO:0034518,GO:0034622,GO:0034641,GO:0034655,GO:0035770,GO:0036002,GO:0036464,GO:0036477,GO:0042221,GO:0042538,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043928,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044297,GO:0044424,GO:0044444,GO:0044463,GO:0044464,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0051960,GO:0051961,GO:0060255,GO:0060284,GO:0065003,GO:0065007,GO:0070925,GO:0071044,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097447,GO:0097458,GO:0098727,GO:0120025,GO:0120038,GO:0120114,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901700,GO:1990124,GO:1990726,GO:1990904,GO:2000026
Exons3
EggNOG free text desc.deadenylation-dependent decapping of nuclear-transcribed mRNA
EggNOG OGsKOG1782@1,KOG1782@2759
Ec32 ortholog descriptionSm-like protein LSm1
Ec32 orthologEc-11_006170.1
Cds size732
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03009,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463960.4213383-CDS-Ecto-sp13_S_contig70:19041..192441681463960.4213383-CDS-Ecto-sp13_S_contig70:19041..19244Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig70 19042..19244 -
1681463960.4351468-CDS-Ecto-sp13_S_contig70:19834..199371681463960.4351468-CDS-Ecto-sp13_S_contig70:19834..19937Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig70 19835..19937 -
1681463960.444117-CDS-Ecto-sp13_S_contig70:20425..208511681463960.444117-CDS-Ecto-sp13_S_contig70:20425..20851Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig70 20426..20851 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig70.18040.1prot_Ecto-sp13_S_contig70.18040.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig70 19042..20851 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig70.18040.1

>prot_Ecto-sp13_S_contig70.18040.1 ID=prot_Ecto-sp13_S_contig70.18040.1|Name=mRNA_Ecto-sp13_S_contig70.18040.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp
MADAPKKGSGRVRKPQQQQQQQQQQQQQRPQAPQGGAAGAPRGARAAVVG
GAGMQNPSPRTHPPNPPPPGQQQQQVMVYPQHPQHHLQHHPQHPQHPQHP
QHPQRIGLPGMGFQHPLPPPPPPPAFFPGSASLFEQLDKRVMVVLRDGRH
LVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGEL
DETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS*
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mRNA from alignment at Ecto-sp13_S_contig70:19042..20851-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig70.18040.1 ID=mRNA_Ecto-sp13_S_contig70.18040.1|Name=mRNA_Ecto-sp13_S_contig70.18040.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1810bp|location=Sequence derived from alignment at Ecto-sp13_S_contig70:19042..20851- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGATGCTCCTAAGAAAGGCTCCGGCAGGGTGCGAAAGCCACAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCCCACAAGCGCCAC
AAGGGGGAGCGGCTGGCGCACCGAGAGGGGCGAGGGCCGCGGTAGTTGGA
GGGGCAGGGATGCAAAACCCCTCTCCTAGAACACATCCACCTAATCCTCC
CCCCCCCGGGCAGCAGCAGCAGCAGGTGATGGTGTACCCCCAACACCCCC
AGCACCATCTACAGCATCACCCACAACACCCACAACATCCGCAGCATCCG
CAGCACCCGCAACGGATCGGGCTCCCTGGGATGGGCTTTCAGCACCCCCT
TCCGCCCCCGCCACCACCCCCCGCGTTCTTTCCTGGGTCGGCGAGTCTGT
TCGAGCAGCTCGACAAGCGGGTCATGGTGGGTACTTGATACGGGGAGACA
GGGGTAGAGCTGCATGTATAGGTGTCCTCCCCTTTTGTAGGGCGATATGG
TCGTGTCAACTGCAGTCAAGCCTTCTCAGTCCTGAATGTGAGCCTCGATT
GTTTCATGGTCCACGCACCTCCCACTGCACTACTGCACAGGAGGTGTCTT
CCCTTTGATGTCTACGAGCCTACGGTATAGCAGTAGGCGAAGTGGTGCTG
CTGTTTTGCCCAGCCGCAACAATGTCGCGAAAGTCTGGTAGAACATACTG
GCAACCGTTGCCGACGAGGATGTTCAAGAACTCCCTCCCGAACGGAGTTG
CGATGCTGTTTTTGCGTACCTCATGTGGGGCCCTTTGTTCATGCGTTCCA
CGTTCGCGTTCGTTTTAAGGATATGGCGTTGAGGAGGATGGAAGTCATGG
ATGGCGGCTTGTAGATTGTTAAACCCAACAATAATCACAACAACACCCGT
ACCAACAACAACAGGTCGTTCTACGCGACGGTAGGCACCTCGTGGGAGTT
ATGAGAAGCTACGACCAGTTTTCCAACATCGTGCTGGAAGACACGCACGA
ACGACACTTTGTGAGAGGTGAGCTTCACCTAACTCCGTTACAAAGCCATG
TGTCTGGCCGGAAATTTTGATCCGCACGACGTCGTGCTCCCCCACCGATG
TGTTTTGCGTGACGTGTCCTTTTTGCTCATTGGCGCGGTGCTCGAAAGAT
CGTCCTGCGTTGCTATCAGCCGAGACTATTCCGCTGTTTTCACGAGTGGC
CCGGGCGGACCCCGTAAATAGTTCATCATTCTGACCCTTTGGAAATCATG
TACTCTATGCGCCTTGAGAAGCTTTGCGCAGAAGAGGAGTTGATTGTAGG
AGATGTTGTTTGGATCGCTTCGAGCATTCTCCGACGTGTGTCTCCCAGTC
AATTTCAGCAGCAGTCGTCCCGTTTTGAGACACCGTCATGACAATTCGGA
CCAGGAGTCCCGGCCAGACCTTTTTTTTTTTGAGCCGAAGTTTTTCACCG
GGGAACATTCATCGGTATTGCAGCACACGTATCCAAACGGGTACGCGCGA
TGCACTTTATTTAGACCGTTGGTGTTGCCGTCTCGTCCGAAATGTCCTCA
TACAGCTGTATGCGCCAACGCTCCCCCCTCGTACCCACCACCCGGTTGGC
GCCGCAGATATTTTCGGGGATATATCGCTGGGGCTTTACCTTGTCCGAGG
GGATGCTCTGGTGTTGATGGGGGAACTCGACGAGACCCGGGAGGAAACCC
CCAGGCTGAGAAGGGTCTCCGCGGACGAGATAATCGAGGCGCAGCAGGAG
GCATCGGCAGAGGAGCGCCAAGACGCGAAGCTAGATTGGCTGTTCCAGGA
CTTGTCGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig70:19042..20851-

>mRNA_Ecto-sp13_S_contig70.18040.1 ID=mRNA_Ecto-sp13_S_contig70.18040.1|Name=mRNA_Ecto-sp13_S_contig70.18040.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=732bp|location=Sequence derived from alignment at Ecto-sp13_S_contig70:19042..20851- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGATGCTCCTAAGAAAGGCTCCGGCAGGGTGCGAAAGCCACAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCCCACAAGCGCCAC
AAGGGGGAGCGGCTGGCGCACCGAGAGGGGCGAGGGCCGCGGTAGTTGGA
GGGGCAGGGATGCAAAACCCCTCTCCTAGAACACATCCACCTAATCCTCC
CCCCCCCGGGCAGCAGCAGCAGCAGGTGATGGTGTACCCCCAACACCCCC
AGCACCATCTACAGCATCACCCACAACACCCACAACATCCGCAGCATCCG
CAGCACCCGCAACGGATCGGGCTCCCTGGGATGGGCTTTCAGCACCCCCT
TCCGCCCCCGCCACCACCCCCCGCGTTCTTTCCTGGGTCGGCGAGTCTGT
TCGAGCAGCTCGACAAGCGGGTCATGGTCGTTCTACGCGACGGTAGGCAC
CTCGTGGGAGTTATGAGAAGCTACGACCAGTTTTCCAACATCGTGCTGGA
AGACACGCACGAACGACACTTTGTGAGAGATATTTTCGGGGATATATCGC
TGGGGCTTTACCTTGTCCGAGGGGATGCTCTGGTGTTGATGGGGGAACTC
GACGAGACCCGGGAGGAAACCCCCAGGCTGAGAAGGGTCTCCGCGGACGA
GATAATCGAGGCGCAGCAGGAGGCATCGGCAGAGGAGCGCCAAGACGCGA
AGCTAGATTGGCTGTTCCAGGACTTGTCGTGA
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