mRNA_Ecto-sp13_S_contig7.18035.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7.18035.1 vs. uniprot
Match: A0A6S7K192_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K192_PARCT) HSP 1 Score: 189 bits (480), Expect = 2.090e-54 Identity = 103/258 (39.92%), Postives = 144/258 (55.81%), Query Frame = 1
Query: 1 DEAVGGLWGWLGSLGSGIDRSNSDTWGSDRWPKSAGHGILVNYKIGQAPFVGDVRMNANVRKVFGGLWGTEDLTTSFDGVCVMRPPKLTKCRFQPSLAKSWLHTDQSKETVGKVPTMHGWQCIQGGVNLEASGEGDGCFRVLSGSHLLHAAAPW----VGTSKDWYKLSESDFKWYQ-EQGCVDLLVTAPKGSITLWDSRVIHANTNLVRGREHPRFRYTTFVCMTPRSQVSSRDAKRRRDAFKNDRTTSHLPSRMRL 759
D + W WL LG+GI R++S TW +DRWPK +GI+ Y+IG APFV R N+NV VF +WGT +L TSFD + ++RP + S SW HTDQS P G+ C+QG +NLE + D F GSH LH T+ D+ +S+ D W + ++G V + APKGS T++DSR++H RE+PR+RYT ++CMTPR+ + R +AF+N R T+H P + L
Sbjct: 91 DHIIDKAWEWLAELGTGIQRNDSSTWTNDRWPKHF-NGIIQRYRIGHAPFVWQARTNSNVIGVFEKIWGTNELLTSFDAMGILRPAVMVTDLEHTS---SWFHTDQS-------PKKEGFHCVQGVLNLEEASIEDAGFTCYPGSHKLHTELFQRNNDYDTTMDFNTISKEDLHWVERDKGLVPTRIPAPKGSFTIFDSRLLHCTVPAKVPRENPRWRYTLYICMTPRAWADKNTLQARVEAFRNQRMTTHWPHHVGL 337
BLAST of mRNA_Ecto-sp13_S_contig7.18035.1 vs. uniprot
Match: UPI00106C72A9 (putative phytanoyl-CoA dioxygenase n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C72A9) HSP 1 Score: 182 bits (463), Expect = 7.560e-52 Identity = 97/263 (36.88%), Postives = 145/263 (55.13%), Query Frame = 1
Query: 1 DEAVGGLWGWLGSLGSGIDRSNSDTWGSDRWPKSAGHGILVNYKIGQAPFVGDVRMNANVRKVFGGLWGTEDLTTSFDGVCVMRPPKLTKCRFQPSLAKSWLHTDQSKETVGKVPTMHGWQCIQGGVNLEASGEGDGCFRVLSGSHLLHAAA----PWVGTSKDWYKLSESDFKWYQE-QGCVDLLVTAPKGSITLWDSRVIHANTNLVRGREHPRFRYTTFVCMTPRSQVSSRDAKRRRDAFKNDRTTSHLPSRMRLCGKEP 774
D + W WL LG+GI+R + TW ++RWP + +GI+ Y+IG APF+ R N NV VF +WGT +L TSFD +C++RP ++ + +SW HTDQS P G+ C+QG +NLE + D F GSH LH + D+ +S+ D +W + +G V + APKGS ++DSR++H N R++PR+RYT ++CMTPR+ + R AF+N + T+H P + L +P
Sbjct: 94 DHIIEQAWEWLFKLGTGINRGDPKTWTNERWPSNF-NGIIQRYRIGHAPFIWKARTNPNVIGVFKEIWGTGELLTSFDAMCILRPAEMVE---DLEYTQSWFHTDQS-------PKKKGFHCVQGVLNLEEASTQDAGFACYPGSHSLHQELFQRNNEYNSEMDFNIISKDDLEWVEHNKGLVPTRIPAPKGSFVVFDSRLLHCNVPANVPRQNPRWRYTLYICMTPRAWSDQNTLQARVKAFRNQQMTTHWPHHLGLFPDDP 345
BLAST of mRNA_Ecto-sp13_S_contig7.18035.1 vs. uniprot
Match: A0A6C0E1L9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0E1L9_9ZZZZ) HSP 1 Score: 143 bits (360), Expect = 3.530e-37 Identity = 84/273 (30.77%), Postives = 144/273 (52.75%), Query Frame = 1
Query: 1 DEAVGGLWGWLGSLGSG----IDRSNSDTWGSDRWPKSAGHGILV-NYKIGQAPFVGDVRMNANVRKVFGGLWGT--EDLTTSFDGVCVMRPPKLTKCRFQPSLAKSWLHTDQSKETVGKVPTMHGWQCIQGGVNLEASGEGDGCFRVLSGSHLLHAAAPWVGTSKD---WYKLSESDFKWYQEQGCVDLLVTAPKGSITLWDSRVIHANTNLVRGREHPRFRYTTFVCMTPRSQVSSRDAKRRRDAFKNDRTTSHLPSRMRLCGKEPQTYGK 789
++ + +W +L L +G I R+++ TW S+ + H +L+ ++ IG + +R N + VF ++ E+L SFDG + PP++TK + + K W HTDQ+ T++ +QC+QG V EGD L GSH H + +KD WYK E + ++++ GC + + PKGS+ L+DSR++H T R R+ FR +VC PR +++ ++++ AF+ R T+H +++L K P+TYG+
Sbjct: 52 NDMIDNMWNYLEELTTGCEFEIKRTDNTTW-SNIYKLLPLHSMLIQHWGIGHSELTWKIRQNPKIIDVFANIYKVKHEELLVSFDGASIHMPPEITKKGWNYN--KLWYHTDQTF-------TINKFQCVQGWVTGFDVNEGDATLSFLEGSHKYHKDFAEMFDNKDKSNWYKFDEDELEFFKLAGCPEKKIKCPKGSLVLFDSRLVHCGTEAYRWRKKQNFRCVVYVCYQPRYLSDNKNIEKKKKAFEESRMTTHWACKIKLFSKTPRTYGQ 314
BLAST of mRNA_Ecto-sp13_S_contig7.18035.1 vs. uniprot
Match: A0A1Z8SIF1_9PROT (Uncharacterized protein n=1 Tax=Candidatus Endolissoclinum sp. TMED37 TaxID=1986638 RepID=A0A1Z8SIF1_9PROT) HSP 1 Score: 142 bits (358), Expect = 7.260e-37 Identity = 92/254 (36.22%), Postives = 133/254 (52.36%), Query Frame = 1
Query: 52 IDRSNSDTWGS--DRWPKSAGHGILV-NYKIGQAPFVGDVRMNANVRKVFGGLWGT--EDLTTSFDGVCVMRPPKLTKCRFQPSLAKSWLHTDQSKETVGKVPTMHGWQCIQGGVNLEASGEGDGCFRVLSGSHLLH--AAAPWVGTSK-DWYKLSESDFKWY-QEQGCVDLLVTAPKGSITLWDSRVIHANTNLVRGREHPRFRYTTFVCMTPRSQVSSRDAKRRRDAFKNDRTTSHLPSRMRLCGKEPQTYG 786
I + + TW S D +PK H +L+ N++ G V DVR N V + F LW T +D+ SFDG+ PP+ T+ + +WLHTDQS + ++C+QG V E EGD L SH H AA + T K DW KL+ ++ Y +E+ C + PKGS+ LWDSR++H +GR + RY +VCMTPRS + + K++R A + R T+H P + +L P+TYG
Sbjct: 61 IKKDDETTWRSWYDLYPK---HSMLIQNFQFGHTQTVWDVRQNPKVIQPFSDLWDTHPKDMLCSFDGISFHIPPEKTRRGW---FRNNWLHTDQSY-------LRNEFECVQGWVTGEDVEEGDATLTFLKNSHKFHKWAANRFNMTDKADWIKLTPEMYEAYTKEKDCRQECIKCPKGSLVLWDSRLVHCGKEPDKGRTNQNTRYIVYVCMTPRSLSTEANLKKKRKAMEELRMTTHWPHKPKLFPINPRTYG 301
BLAST of mRNA_Ecto-sp13_S_contig7.18035.1 vs. uniprot
Match: A0A5J4Y3Z1_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y3Z1_9CHLO) HSP 1 Score: 141 bits (355), Expect = 2.140e-36 Identity = 90/271 (33.21%), Postives = 134/271 (49.45%), Query Frame = 1
Query: 1 DEAVGGLWGWLGSLGSGIDRSNSDTWGSDRWPKSAGHGILVNYKIGQAPFVGDVRMNANVRKVFGGLWGTEDLTTSFDGVCVMRPPKLTKCRFQPSLAKSWLHTDQSKETVGKVPTMHGWQCIQGGVNLEASGEGDGCFRVLSGSHLLHAAAPWVGT---------SKDWYKLSESDFKWYQEQGCVDLLVTAPKGSITLWDSRVIHANTNLVRGREHPRFRYTTFVCMTPRSQVSSRDAKRRRDAFKNDRTTSHLPS-RMRLCGKEPQTY 783
+E V G W WL SL +GI R + TWG DRWP S GI+ ++ FV VR N + +VF GLWGT +L +SFD + +++P + S WLH DQ+ P G CIQG VN+ G V GSH H T ++D+YK + ++ + + ++A GS+ LWDSR H N L+ G ++R+ + C P+S + +D +R+A+ N R T+H P+ ++L KE +Y
Sbjct: 41 EEYVSGAWTWLESLDTGIKRDDPATWGDDRWPSSF-RGIINTLEVSHQDFVWRVRQNPRILQVFEGLWGTNELLSSFDSINILKPGQ------HESSTDGWLHVDQA-------PLRKGVACIQGLVNMVDVSPETGTLLVKDGSHSSHEDFFQNATVLSEEQKQQTEDFYKFQHQERDYFHK--FENRALSAKAGSLFLWDSRCAHQN--LLPGNTD-KWRHVVYTCYQPKSLATEKDLALKREAYNNRRVTTHWPAMNVKLFPKEGNSY 292
BLAST of mRNA_Ecto-sp13_S_contig7.18035.1 vs. uniprot
Match: UPI00145830B4 (uncharacterized protein LOC117344533 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145830B4) HSP 1 Score: 137 bits (346), Expect = 5.160e-35 Identity = 86/259 (33.20%), Postives = 128/259 (49.42%), Query Frame = 1
Query: 1 DEAVGGLWGWLGSL--GSGIDRSNSDTWGSDRWPKSAGHGILVNYKIGQAPFVGDVRMNANVRKVFGGLWGTEDLTTSFDGVCVMRPPKLTKCRFQPSLAKSWLHTDQSKETVGKVPTMHGWQCIQGGVNLEASGEGDGCFRVLSGSHLLHAA-------APWVGTSKDWYKLSESDFKWYQEQGCVDLLVTAPKGSITLWDSRVIHANTNLVRGREHP-RFRYTTFVCMTPRSQVSSRDAKRRRDAFKNDRTTSHLPS 747
D+ VG + WL S IDR S +L Y++ +P +VR+ A + VF +WGTE L +S DG+ + PP+L F ++W H DQ +G +H QG V LE + E D CFRV+ GS +H A +D+Y L +WY+ +G + V PKG + +WDSR +H N +GR+H R+R+ TFVCMTP + +D + +++AF+ T+H PS
Sbjct: 40 DDLVGQIRQWLDKFVDDSPIDRHIS---------------LLQQYRVSASPVAWEVRLKA--KPVFAKIWGTEKLLSSMDGMAIGEPPELGDTAFNKK-GENWFHFDQGSWRLG----LH---AFQGAVYLEETTEEDYCFRVIEGSCKVHREFLNTFKEAEETSAGEDFYDLKPEYVEWYKNKGLKEKKVPVPKGGMVIWDSRTVHDNVKPEKGRKHSDRWRFVTFVCMTPANWAGKKDLELKKEAFEKMVATAHWPS 273
BLAST of mRNA_Ecto-sp13_S_contig7.18035.1 vs. uniprot
Match: R7T715_CAPTE (Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7T715_CAPTE) HSP 1 Score: 129 bits (323), Expect = 8.570e-32 Identity = 76/215 (35.35%), Postives = 108/215 (50.23%), Query Frame = 1
Query: 115 ILVNYKIGQAPFVGDVRMNANVRKVFGGLWGTEDLTTSFDGVCVMRPPKLTKC-RFQPSLAKSWLHTDQSKETVGKVPTMHGWQCIQGGVNLEASGEGDGCFRVLSGSHLLHAA----APWVGTSKDWYKLSESDFKWYQEQGCVDLLVTAPKGSITLWDSRVIHANTNLVRGREHPRFRYTTFVCMTPRSQVSSRDAKRRRDAFKNDRTTSHLP 744
I+ Y I P R+ A + VF GLWGTE L TS DG+ + +PP+L F + LH DQ ++ +G C QG + LE + E D CF V+ SH H P ++ KL + W+++QGC V PKG + +WDSR +HA GRE+PR+RY FVCM P + + D K + +A++ R + H P
Sbjct: 59 IIHKYNIAHCPAAWSARLAA--KPVFAGLWGTEKLLTSTDGIALAQPPELQGSGEFWKEGDYTGLHHDQGRD-------RYGLHCYQGALYLEDAEEDDYCFMVIEKSHQFHTEYFKRIP-EHRKGEFRKLDKGSIDWFKQQGCRIRRVPCPKGGMIVWDSRTVHAGAPPKVGRENPRWRYVMFVCMGPAAWATPEDLKLKEEAYEKLRVSRHPP 263
BLAST of mRNA_Ecto-sp13_S_contig7.18035.1 vs. uniprot
Match: A0A210Q5M1_MIZYE (Uncharacterized protein n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210Q5M1_MIZYE) HSP 1 Score: 128 bits (322), Expect = 1.730e-31 Identity = 74/219 (33.79%), Postives = 113/219 (51.60%), Query Frame = 1
Query: 115 ILVNYKIGQAPFVGDVRMNANVRKVFGGLWGTEDLTTSFDGVCVMRPPKLTKCRFQPSLAKSWLHTDQSKETVGKVPTMHGWQCIQGGVNLEASGEGDGCFRVLSGSHLLHAA-------APWVGTSKDWYKLSESDFKWYQEQGCVDLLVTAPKGSITLWDSRVIHANTNLVRGREHP-RFRYTTFVCMTPRSQVSSRDAKRRRDAFKNDRTTSHLPS 747
+ Y++ +P + R+ A + VF +WGTE L +S DG+ + PP+L RF + ++W H DQ +G +H QG + LE + E D CFRV+ GS +H A +D+Y L +WY+ +G + V PKG + LWDSR +H N + R H R+R+ TFVCMTP +D + +++AF+ T+H PS
Sbjct: 68 LTQQYRVSASPVAWEARLKA--KPVFATVWGTEKLLSSMDGMAIGEPPELGNTRFN-NQGETWFHFDQGSWRIG----LH---AFQGAMYLEETTEEDYCFRVIEGSCKVHKEFLDTFQEAKEDCAGEDFYILKPEYIEWYKNKGLKEKKVPVPKGGMVLWDSRTVHDNVKPEQNRLHSDRWRFVTFVCMTPARWARKKDLELKKEAFEKMVATAHWPS 276
BLAST of mRNA_Ecto-sp13_S_contig7.18035.1 vs. uniprot
Match: A0A1Y2FG83_9BASI (Uncharacterized protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2FG83_9BASI) HSP 1 Score: 127 bits (318), Expect = 4.410e-31 Identity = 87/249 (34.94%), Postives = 120/249 (48.19%), Query Frame = 1
Query: 28 WLGSLGSGIDRSNSDTWGSDRWPKSAGHGILVNYKIGQAPFVGDVRMNANVRKVFGGLWGTEDLTTSFDGVCVMRPPKLTKCRFQPSLAKSWLHTDQSKETVGKVPTMHGWQCIQGGVNLEASGEGDGCFRVLSGSHLL----HAAAPWV---GTS---KDWYKLSESDFKWYQEQGCVDLLVTAPKGSITLWDSRVIHANTNLVRGREHPRFRYTTFVCMTPRSQVSSRDAKRRRDAFKNDRTTSHLP 744
WL + G DR++ TW +D P A G + + ++ +V DVR V F +WGT+ LTTSFDG +M + K PS A W H DQS P G+ C QG VNL +G DG VL GS LL A P G S +DWY ++ +W+ +GC V A G + LWDSR +H N R R R T+VCM P ++++D +++ F+ T+H P
Sbjct: 63 WLENFKMGFDRNDESTWNADSMPP-AFKGGMFSSRVYHEQWVWDVRSEQGVIDAFAKVWGTDKLTTSFDGAAIMLHHR--KDLPHPSAADKWEHMDQS-------PNRTGFFCAQGIVNLNFNGPEDGGLLVLEGSSLLIEEYFATFPEEKANGNSWGPEDWYGFTDKQQEWFFARGCKWAKVCAEPGDLILWDSRGMHYN----RRPSGDRDRVCTYVCMAPADLLNAKDKATKQELFRTFGATTHNP 297
BLAST of mRNA_Ecto-sp13_S_contig7.18035.1 vs. uniprot
Match: UPI001E1E0EED (uncharacterized protein LOC123561651 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0EED) HSP 1 Score: 125 bits (313), Expect = 2.060e-30 Identity = 82/236 (34.75%), Postives = 115/236 (48.73%), Query Frame = 1
Query: 88 RWPKSAGHGILVNYKIGQAPFVGDVRMNANVRKVFGGLWGTEDLTTSFDGVCVMRPPKLTKCRFQPSLAKSWLHTDQSKETVGKVPTMHGWQCIQGGVNLEASGEGDGCFRVLSGSHLL-------HAAAPWVGTSKDWYKLSESDFKWYQEQGCVDLLVTAPKGSITLWDSRVIHANTNLVRGREHP-RFRYTTFVCMTPRSQVSSRDAKRRRDAFKNDRTTSHLPSRMRLCGKE 771
+WPKS G++ Y G +R A + VF LW TE L TSFD + + RPP+ + F + WLH DQ G QGGV LE + E D +V+ SH + + A +++LSES ++++++GC V PKG + LWDSRV+HAN GR + R+RY FV MTP S D +R+A+K + T+H S L KE
Sbjct: 44 KWPKSE-FGLIRGYNTGHLETTWRIRFKA--KSVFSQLWKTEKLMTSFDSIAIGRPPEEGEEPFDDGNSH-WLHLDQEA-------CREGLHAYQGGVYLEEACEDDWTLQVMEKSHKVFKKFFERNEMAAEQSNKTQFFRLSESHVRYFEQKGCKIKRVPVPKGGMVLWDSRVVHANAQPKEGRTNVGRWRYVVFVSMTPARWASDTDLAIKREAYKGAKMTNHWSSDGSLLMKE 268 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7.18035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7.18035.1 >prot_Ecto-sp13_S_contig7.18035.1 ID=prot_Ecto-sp13_S_contig7.18035.1|Name=mRNA_Ecto-sp13_S_contig7.18035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=263bp DEAVGGLWGWLGSLGSGIDRSNSDTWGSDRWPKSAGHGILVNYKIGQAPFback to top mRNA from alignment at Ecto-sp13_S_contig7:49001..49789- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7.18035.1 ID=mRNA_Ecto-sp13_S_contig7.18035.1|Name=mRNA_Ecto-sp13_S_contig7.18035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=789bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7:49001..49789- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7:49001..49789- >mRNA_Ecto-sp13_S_contig7.18035.1 ID=mRNA_Ecto-sp13_S_contig7.18035.1|Name=mRNA_Ecto-sp13_S_contig7.18035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=789bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7:49001..49789- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |