prot_Ecto-sp13_S_contig7.18033.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7.18033.1
Unique Nameprot_Ecto-sp13_S_contig7.18033.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length175
Homology
BLAST of mRNA_Ecto-sp13_S_contig7.18033.1 vs. uniprot
Match: B5LWK0_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWK0_9PHYC)

HSP 1 Score: 119 bits (297), Expect = 7.760e-31
Identity = 64/171 (37.43%), Postives = 109/171 (63.74%), Query Frame = 0
Query:    1 AEKNINFSDHAREQLFDSDWSPSSLKLMESWYNKCMKASQSHIEAAIAARKRHVRVALPSIVVGSAATGIAFFSVGDECDETSAGRAEATAISVSLAVLTSALSVLGGFTALFALSERQQAHTTAAANFQNLARKIQLTLFIPAKLRNSCELKLSEASAEYNHIVESSPVV 171
            ++++   S+   E++F++DW+ +SL L+E  + +C   S ++ +AA  AR +H  V++P+IVV S AT  +FFS G  CD+      E TA+ +S+A+LTS  ++LGG +AL++   +  A   A+ NF  LA+K QL +F+  +LR   E+ L+E SAE+ H+  +SP++
Sbjct:    2 SDQDARLSNFEAERVFENDWTNASLDLLEGLHKQCKDNSSAYADAARVARWKHRAVSIPTIVVASFATATSFFSAGSSCDDDE----ENTAVKISVAILTSITAILGGVSALYSFDSKTTACIAASGNFDALAKKAQLQIFLSNQLRGPVEVVLTEISAEFCHLTNTSPLL 168          
BLAST of mRNA_Ecto-sp13_S_contig7.18033.1 vs. uniprot
Match: Q6XM51_9PHYC (FirrV-1-A36 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM51_9PHYC)

HSP 1 Score: 100 bits (248), Expect = 1.850e-23
Identity = 55/159 (34.59%), Postives = 95/159 (59.75%), Query Frame = 0
Query:   13 EQLFDSDWSPSSLKLMESWYNKCMKASQSHIEAAIAARKRHVRVALPSIVVGSAATGIAFFSVGDECDETSAGRAEATAISVSLAVLTSALSVLGGFTALFALSERQQAHTTAAANFQNLARKIQLTLFIPAKLRNSCELKLSEASAEYNHIVESSPVV 171
            E++FD+ W+ +S+ L+E    +C   + ++  AA  AR ++  +++PSIVV S AT  +FFS G  C+       E+ AI + +A+LTS  ++L G T L++   +  A   A+ NF  LA++ Q+ +++   LR   E+ L+E SAEY H+  +SP++
Sbjct:   17 EKIFDNGWTNASMDLLEDMCKQCRTNASAYARAARTARWKYRMLSIPSIVVASFATATSFFSAGSSCE-----AEESNAIKICVAILTSITAILHGVTHLYSFDSKMTACIAASGNFDALAKQAQMQIYLSNNLRGPVEVILTEISAEYCHLTNTSPLL 170          
BLAST of mRNA_Ecto-sp13_S_contig7.18033.1 vs. uniprot
Match: A0A2D4XGG1_9FLAO (Uncharacterized protein n=1 Tax=Aequorivita sp. TaxID=1872390 RepID=A0A2D4XGG1_9FLAO)

HSP 1 Score: 51.6 bits (122), Expect = 8.770e-5
Identity = 43/152 (28.29%), Postives = 71/152 (46.71%), Query Frame = 0
Query:   20 WSPSSLKLMESWYNKCMKASQSHIEAAIAARKRHVRVALPSIVVGSAATGIAFFSVGDECDETSAGRAEATAISVSLAVLTSALSVLGGFTALFALSERQQAHTTAAANFQNLARKIQLTLFIPAKLRNSCELKLSEASAEYNHIVESSPVV 171
            W+  +  L+  W  K       H ++    RKR+   ++P IV+ S  TG A F +    DE     A+A  I   L +    LS L  F     + E+ ++H ++   +  L R IQ+ L +    R+SC   L+   AEY+ ++E SP++
Sbjct:   14 WTEEAENLLAEWSEKAGCYRWLHDKSEKKYRKRYYLFSIPVIVL-STLTGTANFGMSSYVDEEDENTAKA--IVGGLNLFAGLLSTLQTF---LKVVEQMESHRSSGVAWSKLGRNIQIELALDHSRRSSCHDFLNICRAEYDRLIEQSPLI 159          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7.18033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
B5LWK0_9PHYC7.760e-3137.43Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XM51_9PHYC1.850e-2334.59FirrV-1-A36 n=1 Tax=Feldmannia irregularis virus a... [more]
A0A2D4XGG1_9FLAO8.770e-528.29Uncharacterized protein n=1 Tax=Aequorivita sp. Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..76
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7contigEcto-sp13_S_contig7:41084..41608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7.18033.1mRNA_Ecto-sp13_S_contig7.18033.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7 41084..41608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7.18033.1 ID=prot_Ecto-sp13_S_contig7.18033.1|Name=mRNA_Ecto-sp13_S_contig7.18033.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=175bp
AEKNINFSDHAREQLFDSDWSPSSLKLMESWYNKCMKASQSHIEAAIAAR
KRHVRVALPSIVVGSAATGIAFFSVGDECDETSAGRAEATAISVSLAVLT
SALSVLGGFTALFALSERQQAHTTAAANFQNLARKIQLTLFIPAKLRNSC
ELKLSEASAEYNHIVESSPVVYGW*
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