prot_Ecto-sp13_S_contig7.18030.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7.18030.1
Unique Nameprot_Ecto-sp13_S_contig7.18030.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length362
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7.18030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 221..256
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 279..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 311..333
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 334..361
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..304
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 305..310
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..190
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 191..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 257..278
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..169
NoneNo IPR availableTMHMMTMhelixcoord: 282..304
NoneNo IPR availableTMHMMTMhelixcoord: 170..192
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 256..278
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 202..220
NoneNo IPR availableTMHMMTMhelixcoord: 311..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7contigEcto-sp13_S_contig7:27182..28267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7.18030.1mRNA_Ecto-sp13_S_contig7.18030.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7 26576..33648 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7.18030.1 ID=prot_Ecto-sp13_S_contig7.18030.1|Name=mRNA_Ecto-sp13_S_contig7.18030.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=362bp
MARVEHGRDVRQGDVLQELDNHAPIGLAPRGRNLERARSWPGTANITDVE
SGFNVRSGDVVQGPGNPAPTDPCCRFPSVFLWHTLIISGLEAYFSIINAI
NHGHVSSFASWVFNASAWMESIGFLFALVIMALTSCNCNVIDSARLGSGG
SPLLMVWEANFALDGSRTPLMSTAVYVGFALQAAAIWVYSMVLLSDRSPV
DAIALGISVLAACGVVLIGFKKLIHLVHTRLAQAERRLVVTGRISYRARI
VTAFRSFVQNGPLVNALILLVFCLQYVVDWYQHIFVAPLVVEVIELVLIF
AGWSSSTSDSIVLAVLDLILVVSALPQVCWFLWKPLNVVLGIEVFFPTSD
ELYSVVQRVLP*
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