prot_Ecto-sp13_S_contig69994.18023.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69994.18023.1
Unique Nameprot_Ecto-sp13_S_contig69994.18023.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length46
Homology
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BLAST of mRNA_Ecto-sp13_S_contig69994.18023.1 vs. uniprot
Match: A0A6H5KXX9_9PHAE (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX9_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.210e-11
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0 
Query:   15 DLVVPRLKKVAGKTRLLVMLRDPVKRAYSHYQ 46
            DLV+PRLKKVAGKTRLLVMLRDPVKRAYSHYQ
Sbjct:  265 DLVIPRLKKVAGKTRLLVMLRDPVKRAYSHYQ 296
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BLAST of mRNA_Ecto-sp13_S_contig69994.18023.1 vs. uniprot
Match: D8LJQ2_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ2_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 2.790e-10
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0 
Query:   15 DLVVPRLKKVAGKTRLLVMLRDPVKRAYSHY 45
            DLV+PRLK VAGKTRLLVMLRDPVKRAYSHY
Sbjct:  350 DLVIPRLKNVAGKTRLLVMLRDPVKRAYSHY 380
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BLAST of mRNA_Ecto-sp13_S_contig69994.18023.1 vs. uniprot
Match: A0A835YZ41_9STRA (Sulfotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ41_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.300e-6
Identity = 23/32 (71.88%), Postives = 28/32 (87.50%), Query Frame = 0 
Query:   15 DLVVPRLKKVAGKTRLLVMLRDPVKRAYSHYQ 46
            D+V+PRL+ VA   +L+VMLRDPVKRAYSHYQ
Sbjct:  373 DVVIPRLQAVAPHAKLIVMLRDPVKRAYSHYQ 404
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69994.18023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KXX9_9PHAE1.210e-1196.88Asp_Arg_Hydrox domain-containing protein n=1 Tax=E... [more]
D8LJQ2_ECTSI2.790e-1093.55Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A835YZ41_9STRA1.300e-671.88Sulfotransferase n=1 Tax=Tribonema minus TaxID=303... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 9..46
e-value: 2.2E-8
score: 35.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69994contigEcto-sp13_S_contig69994:11..148 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69994.18023.1mRNA_Ecto-sp13_S_contig69994.18023.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69994 11..148 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69994.18023.1 ID=prot_Ecto-sp13_S_contig69994.18023.1|Name=mRNA_Ecto-sp13_S_contig69994.18023.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=46bp
PCLWRPGVCLISYRDLVVPRLKKVAGKTRLLVMLRDPVKRAYSHYQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase