prot_Ecto-sp13_S_contig6996.18020.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6996.18020.1
Unique Nameprot_Ecto-sp13_S_contig6996.18020.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length283
Homology
BLAST of mRNA_Ecto-sp13_S_contig6996.18020.1 vs. uniprot
Match: A0A6H5KWW6_9PHAE (Dynamin-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWW6_9PHAE)

HSP 1 Score: 459 bits (1181), Expect = 9.440e-155
Identity = 255/282 (90.43%), Postives = 260/282 (92.20%), Query Frame = 0
Query:    1 SHEEGDASFKVDEAALRKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKTQGGVNEADMPDVEEYRRDLERIDFRGLPRRNRRVLTTLDDIVERDIKQCVTRAGGVRRIYKLDATARVVDDFASSNASSRRRRATMGGVGVRHRAHRSSGLFGRRRGASMQADSEHSFRGAEIDVGDGDSLTTQEEGEGGDXXXXEEGDVPVLLGACAMVLVVVVGVCLALWKMEALPPLPEWAVPLKPERFPSLETPPA 282
            SHEEG A F VDEAAL KEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKT+GGVNEADMPDVEEYRRDLERID R LPRRNRRVLTTLDDI+ERDIKQCVTRAGGVRRIYKLDA ARVV+DFASSNASSR RRATMGGVGVRHRAHRSSGLFGRRRGASMQADSE SFRGAE++ GDGDSLTTQ       XXXX  GDVPVLLGAC MVLVVVVGVCLALWKMEALPPLP WAVPLKPERFP LETPPA
Sbjct:  490 SHEEGHAPFNVDEAALHKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKTEGGVNEADMPDVEEYRRDLERIDLRSLPRRNRRVLTTLDDILERDIKQCVTRAGGVRRIYKLDAAARVVNDFASSNASSRWRRATMGGVGVRHRAHRSSGLFGRRRGASMQADSE-SFRGAEMEDGDGDSLTTQXXXXXX-XXXXXXGDVPVLLGACVMVLVVVVGVCLALWKMEALPPLPAWAVPLKPERFPPLETPPA 769          
BLAST of mRNA_Ecto-sp13_S_contig6996.18020.1 vs. uniprot
Match: A0A835Z9Q7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q7_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.370e-18
Identity = 47/90 (52.22%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    8 SFKVDEAALRKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKTQGGVNEADMPDVEEY 97
            +F  DEA LR+EM+ LP+NVG+RKIN++ +RAKL K+H  I+  +R++MP  +GAEAAQ R++  L EVF  VK + G  + DMPD+E Y
Sbjct:  277 TFAEDEALLRREMMQLPRNVGLRKINEMTKRAKLAKVHACILDHLRSQMP-WYGAEAAQQRLMEQLPEVFTAVKRKYGFPDGDMPDIERY 365          
BLAST of mRNA_Ecto-sp13_S_contig6996.18020.1 vs. uniprot
Match: A0A8J6CGK6_DIALT (Dynamin-type G domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CGK6_DIALT)

HSP 1 Score: 92.8 bits (229), Expect = 1.440e-17
Identity = 54/159 (33.96%), Postives = 89/159 (55.97%), Query Frame = 0
Query:    9 FKVDEAALRKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKTQGGVNEADMPDVEEYRRDLERIDFRGLPRRNRRVLTTLDDIVERDIKQCVT------RAGGVRRIYKLDATARVVDDFASSNASS 161
            F  +E  L  ++LDLP+N  V KIN+L++RA+LVK+H  ++  +   MP ++G EAAQ R+LA++ EVF+ V+ Q  +   D PD+E + R   +  F  LP+   R L  +D+++E D+ + +       R+G  RR+    A   +     +  A S
Sbjct:  354 FLAEERDLVADLLDLPRNAAVSKINELVKRARLVKVHAALLTFLHDAMPSMFGREAAQKRLLANMLEVFKRVQQQHKLPPGDFPDIERFTRMAGQFSFADLPKIAPRRLQLVDELLEVDVPELLQMVRQHQRSGTTRRVSTTAALPHLKSSAVAGKAPS 512          
BLAST of mRNA_Ecto-sp13_S_contig6996.18020.1 vs. uniprot
Match: A0A7S1U175_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U175_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 6.240e-17
Identity = 46/136 (33.82%), Postives = 84/136 (61.76%), Query Frame = 0
Query:    2 HEEGDASFKVDEAALRKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKTQGGVNEADMPDVEEYRRDLERIDFRGLPRRNRRVLTTLDDIVERDIKQCVTRAGG 137
            H +  A F  D  +L KE+  LP +   RK++++++R +LVK+H  I+  +R++MP  WG+EA +++I+ +L+ +F+EV+ + G++  D P  EE+   L+  DFR LP      L TL +++++ I   + + GG
Sbjct:  288 HSDHKAIFDRDAQSLMKEIEGLPADAASRKVDEMVKRVRLVKVHACILGHLRSKMPWFWGSEARKEQIIDNLDIIFDEVQQKYGLSAGDFPKTEEFATCLKTFDFRKLPTLEYSALETLQELLDKKIPAAMGKHGG 423          
BLAST of mRNA_Ecto-sp13_S_contig6996.18020.1 vs. uniprot
Match: A0A7S2PYV9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PYV9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 7.300e-17
Identity = 46/128 (35.94%), Postives = 82/128 (64.06%), Query Frame = 0
Query:    9 FKVDEAALRKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKTQGGVNEADMPDVEEYRRDLERI-DFRGLPRRNRRVLTTLDDIVERDIKQCVTRA 135
            F  DE  L +E++DLP+    RK+N ++ R +LVK+H+ I+  IR   PR +G + ++++ILA L+ + + V+ +  +++ DMPD +E+  +L +  DF   P  NR ++  LD +VE+DI + V++A
Sbjct:  364 FTKDEKLLVRELIDLPRCAAERKVNQMVNRIRLVKVHICILGTIRNMTPRFFGKKRSREQILAELDVILDNVRVEFNLSKGDMPDAKEFAANLNKFHDFSVFPPINRSLIKKLDSLVEKDIPEIVSQA 491          
BLAST of mRNA_Ecto-sp13_S_contig6996.18020.1 vs. uniprot
Match: D7G5K7_ECTSI (RME1L2, RME1-like GTPase/ATPase without a C-terminal EH domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K7_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 6.190e-16
Identity = 46/136 (33.82%), Postives = 78/136 (57.35%), Query Frame = 0
Query:    9 FKVDEAALRKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKTQGGVNEADMPDVEEYRRDLERIDFRGLPRRNRRVLTTLDDIVERDIKQCVTRAGGVRRIYKL 144
            F+ D+ +L +E+ DLP+    RKIN L++RA  V+ H  ++  +R + P ++G    ++ +L ++E V E V+ + G++EADMPD +  R +L+  DF   P      L  L  +V+ DI Q +   GG  +I+K 
Sbjct:  274 FEADQESLTRELTDLPRLSATRKINQLIKRANSVRAHACVLSYLREQTPWMYGRARRREDLLENMEGVLETVRAKHGLHEADMPDADALRANLQSFDFASFPILTPAALRQLRHVVDVDIHQVLQEGGGSAKIFKF 409          
BLAST of mRNA_Ecto-sp13_S_contig6996.18020.1 vs. uniprot
Match: D3BF55_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BF55_POLPP)

HSP 1 Score: 87.8 bits (216), Expect = 7.310e-16
Identity = 47/132 (35.61%), Postives = 79/132 (59.85%), Query Frame = 0
Query:   16 LRKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKTQGGVNEADMPDVEEYRRDLERIDFRGLPRRNRRVLTTLDDIVERDIKQCVTRAGGVRRIYKLDAT 147
            L KE+L LPKN  +RK+NDL++RA+  K+H  II  +R  MP ++G ++ Q  ++ +L++ F++++    +   D PDVE+YR  L+  DF   P+ N ++L  LD+++  D  Q + R       + LD T
Sbjct:  277 LIKELLMLPKNSAIRKVNDLVKRARSAKVHALIIGHLRNEMPNVFGKDSKQQELIKNLDKEFQKIERMYNIPAGDFPDVEKYRNILKVHDFSKFPKLNPKMLDVLDEVLAVDFPQLLQR-------FPLDGT 401          
BLAST of mRNA_Ecto-sp13_S_contig6996.18020.1 vs. uniprot
Match: A0A6H5JAQ6_9PHAE (Dynamin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ6_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 7.940e-16
Identity = 45/136 (33.09%), Postives = 78/136 (57.35%), Query Frame = 0
Query:    9 FKVDEAALRKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKTQGGVNEADMPDVEEYRRDLERIDFRGLPRRNRRVLTTLDDIVERDIKQCVTRAGGVRRIYKL 144
            F+ D+ +L +E+ DLP+    RKIN L++R   V+ H  ++  +R +MP ++G    ++ +L +++ V E V+ + G++EADMPD +  R +L+  DF   P      L  L  +V+ DI Q +   GG  +I+K 
Sbjct:  186 FETDQESLTRELTDLPRLSATRKINQLIKRTNSVRAHACVLSYLREQMPWMYGRARRREDLLDNMDGVLETVRAKHGLHEADMPDADALRANLQSFDFASFPILTPATLQQLRHVVDVDIHQALQEGGGSAKIFKF 321          
BLAST of mRNA_Ecto-sp13_S_contig6996.18020.1 vs. uniprot
Match: A0A835YYV9_9STRA (RME1, RME-1/EHD family ATPase with a C-terminal EH domain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYV9_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.050e-15
Identity = 45/127 (35.43%), Postives = 76/127 (59.84%), Query Frame = 0
Query:    2 HEEGDASFKVDEAALRKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKTQGGVNEADMPDVEEYRRDLERIDFRGLPRRNRRVLTTLDDIVERDI 128
            +++  A F ++E  L  ++ DLP+N  VRKIN+L++R +L K+H  II  +RA+MP + G E AQ +++  +  VF  V  Q  +   D PD+E +R   E + F   P+   ++L  LD+++ +DI
Sbjct:  256 YDDNAALFDMEERDLMNDLRDLPRNSAVRKINELVKRCRLAKVHAYIIGHLRAQMPGMVGKEKAQRKLMQDMGSVFRAVMKQYNLAPGDFPDLETFRSKCEELSFAKFPKLKPKMLQDLDEVLSQDI 382          
BLAST of mRNA_Ecto-sp13_S_contig6996.18020.1 vs. uniprot
Match: L8GGP3_ACACA (Receptor mediated endocytosis family member (Rme1), putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GGP3_ACACA)

HSP 1 Score: 87.0 bits (214), Expect = 1.230e-15
Identity = 41/120 (34.17%), Postives = 77/120 (64.17%), Query Frame = 0
Query:    9 FKVDEAALRKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIYAIRARMPRLWGAEAAQDRILASLEEVFEEVKTQGGVNEADMPDVEEYRRDLERIDFRGLPRRNRRVLTTLDDIVERDI 128
            F  ++A L K+++ LP N  +RK+N+L++RA+LVK+H  +I  I+ +MP LWG++A +D ++  +  V+ EVK    +   D PD+E ++  L+  DF    + + ++++ +DD++  DI
Sbjct:  234 FDAEQADLLKDLMSLPTNSAMRKVNELVKRARLVKVHAYLIGHIKKQMPALWGSKAKKDELIKDMLNVYREVKRTHRLPPGDFPDLERFKETLKDHDFDTFAKLDEKLVSRIDDVLGIDI 353          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6996.18020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWW6_9PHAE9.440e-15590.43Dynamin-type G domain-containing protein n=2 Tax=E... [more]
A0A835Z9Q7_9STRA4.370e-1852.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J6CGK6_DIALT1.440e-1733.96Dynamin-type G domain-containing protein n=2 Tax=D... [more]
A0A7S1U175_9STRA6.240e-1733.82Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2PYV9_9STRA7.300e-1735.94Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
D7G5K7_ECTSI6.190e-1633.82RME1L2, RME1-like GTPase/ATPase without a C-termin... [more]
D3BF55_POLPP7.310e-1635.61Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
A0A6H5JAQ6_9PHAE7.940e-1633.09Dynamin-type G domain-containing protein n=1 Tax=E... [more]
A0A835YYV9_9STRA1.050e-1535.43RME1, RME-1/EHD family ATPase with a C-terminal EH... [more]
L8GGP3_ACACA1.230e-1534.17Receptor mediated endocytosis family member (Rme1)... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.268.20coord: 8..136
e-value: 2.3E-27
score: 97.8
NoneNo IPR availablePANTHERPTHR11216EH DOMAINcoord: 13..131
NoneNo IPR availablePANTHERPTHR11216:SF131coord: 13..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..254
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 255..282
NoneNo IPR availableTMHMMTMhelixcoord: 232..254
IPR040990Domain of unknown function DUF5600PFAMPF18150DUF5600coord: 28..130
e-value: 2.7E-23
score: 82.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6996contigEcto-sp13_S_contig6996:324..4428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6996.18020.1mRNA_Ecto-sp13_S_contig6996.18020.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6996 324..4428 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6996.18020.1 ID=prot_Ecto-sp13_S_contig6996.18020.1|Name=mRNA_Ecto-sp13_S_contig6996.18020.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp
SHEEGDASFKVDEAALRKEMLDLPKNVGVRKINDLMQRAKLVKIHLQIIY
AIRARMPRLWGAEAAQDRILASLEEVFEEVKTQGGVNEADMPDVEEYRRD
LERIDFRGLPRRNRRVLTTLDDIVERDIKQCVTRAGGVRRIYKLDATARV
VDDFASSNASSRRRRATMGGVGVRHRAHRSSGLFGRRRGASMQADSEHSF
RGAEIDVGDGDSLTTQEEGEGGDDEEKEEGDVPVLLGACAMVLVVVVGVC
LALWKMEALPPLPEWAVPLKPERFPSLETPPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040990DUF5600