mRNA_Ecto-sp13_S_contig6992.18013.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6992.18013.1
Unique NamemRNA_Ecto-sp13_S_contig6992.18013.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6992.18013.1 vs. uniprot
Match: D7FWN1_ECTSI (Glutaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN1_ECTSI)

HSP 1 Score: 499 bits (1285), Expect = 1.010e-170
Identity = 275/326 (84.36%), Postives = 280/326 (85.89%), Query Frame = 1
Query:   55 MTAPVPPAGEASVTGQPIRRVTIGILALQGAFAEHSSLLSKLGADVREVRLPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTSALETGSVGRKDGDSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLK-EEADDRDXXXXXXXXXXLAAFFVEPNPSTAAVAGEGGGTGSGARTGEKEAPEVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKEAVSAGAGGVRDAESSTKAPAGXXXXXXAEVAMA 1029
            MTAPVPP GEASVTG+P RRVTIGILALQGAFAEHSSLLSKLGADVREVRLPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTSALETGSVG+KDG SANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLK EEAD   XXXXXXXXXX                           +GEKEAPEVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKEAVS+G GGVRDAES  K   G      AEVA+A
Sbjct:    1 MTAPVPPPGEASVTGEPTRRVTIGILALQGAFAEHSSLLSKLGADVREVRLPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTSALETGSVGKKDGGSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLKQEEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEKEAPEVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKEAVSSGTGGVRDAESPAKT-LGAAAAAEAEVAVA 325          
BLAST of mRNA_Ecto-sp13_S_contig6992.18013.1 vs. uniprot
Match: A0A835YX69_9STRA (Glutaminase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX69_9STRA)

HSP 1 Score: 288 bits (736), Expect = 4.670e-89
Identity = 154/272 (56.62%), Postives = 188/272 (69.12%), Query Frame = 1
Query:  121 IGILALQGAFAEHSSLLSKLGADVREVRLPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTSALETGSVGRKDGDSANKNPYPAVFIRAPAVLE-AGPGVDVLCKVRSRPCNKAVTVMKAQLKEEADDRDXXXXXXXXXXLAAFFVEPNPSTAAVAGEGGGTGSGARTGEKEAPEVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKEA 933
            +G+LALQGAF EH++LL  LGA V EVRLP +F GLD IVLPGGESTAMALIGERWGVFP+L++WV+ GRPVWGTCAGMILLS+ ALMQK+GGQ+LVGGL+VEICRNYFG+Q SSFE P+DT+ L  G    +   +  + PYPAVFIRAPA+L  AG GV +L KVR+ PC+KA   ++A L   A   +               +EP                   T  +E PEVIVA +K NI+ TAFHPELT D RWH YF+++V+EA
Sbjct:   24 VGVLALQGAFEEHANLLRSLGAKVTEVRLPGDFAGLDAIVLPGGESTAMALIGERWGVFPQLREWVATGRPVWGTCAGMILLSNEALMQKEGGQALVGGLDVEICRNYFGSQISSFEQPIDTTLL--GLTKEECAGTDVEKPYPAVFIRAPAILSVAGEGVSILAKVRALPCSKARLALEASLNAPAASPERSAKRQR--------LEPY-----------------LTPSEELPEVIVAAKKDNILVTAFHPELTADKRWHAYFLKMVREA 268          
BLAST of mRNA_Ecto-sp13_S_contig6992.18013.1 vs. uniprot
Match: K8YT50_NANGC (Glutaminase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YT50_NANGC)

HSP 1 Score: 253 bits (646), Expect = 1.440e-75
Identity = 134/280 (47.86%), Postives = 183/280 (65.36%), Query Frame = 1
Query:  121 IGILALQGAFAEHSSLLSKLGADVREVRLPHEFE-GLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTS-ALETGSVGRKDGDSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLKEEADDRDXXXXXXXXXXLAAFFVEPNPSTAAVAGEGGGTGSGARTGEKEAPE--------VIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKE 930
            IGILALQGAF EH  ++ +LGA   EVRLP + +  LDG+++PGGESTAMA++GER G+FP+LK +V  G+P+WGTCAGMILLS+ A+MQK GGQ L+GGL+VE+CRN+FG+Q SSFEV L    A   GS+G       ++ P  AVFIRAPA+LEAGPGV+VL +V++ PC +A   ++   +E+   R+                 P+P     A E G  G G   GEK   E        V+VA+++G+++ TAFHPELT +  WH+YF+ +  +
Sbjct:   11 IGILALQGAFEEHRKIVQELGARTVEVRLPDDLDKNLDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKPIWGTCAGMILLSNRAIMQKAGGQPLIGGLDVEVCRNFFGSQVSSFEVLLQLEGAAAAGSLG-------SRGPVSAVFIRAPAILEAGPGVEVLARVKATPCAQARHCVEEVYREQQKQREELLQREGRPSA------PSPLVPTAASEDGARGRGRSGGEKTCMEREEDGRMEVVVAVQQGHLLATAFHPELTPERWWHQYFMSMCSQ 277          
BLAST of mRNA_Ecto-sp13_S_contig6992.18013.1 vs. uniprot
Match: A0A7S2RJG7_9STRA (Glutaminase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJG7_9STRA)

HSP 1 Score: 250 bits (639), Expect = 9.830e-75
Identity = 130/278 (46.76%), Postives = 180/278 (64.75%), Query Frame = 1
Query:  109 RRVTIGILALQGAFAEHSSLLSKLGADVREVRLPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTSALETGSVGRKDGDSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLKEEADDRDXXXXXXXXXXLAAFFVEPNPSTAAVAGEGGGTGSGARTGEKEAPEVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKEAVSA 942
            R  T+G+LA+QG+FAEH  +L+ LG   REVRLP + EGLDG++LPGGEST MA+IGE  GVFP L+ ++  G+PVWGTCAG+ILLS+ AL QK+GGQ+LVGGL++E+CRN+FG+Q  S E+ ++   LE  S G  D        + AVFIRAPA+L+   GVDVL +V+++PC+ A+  M+A      + +           L+A              +  G G    T   E  +VIVA++KG I+GTAFHPE T+D RWH++F+ +V  A S+
Sbjct:   13 RSKTVGVLAIQGSFAEHLEMLAALGTRTREVRLPEDLEGLDGLILPGGESTTMAIIGEPTGVFPALRSYIQSGKPVWGTCAGLILLSNTALFQKEGGQALVGGLDIEVCRNFFGSQVESCEMDMEVGVLEDFSAGMDDKG------HRAVFIRAPAILQVAEGVDVLARVKAKPCSTALASMQASNSVPDEFKPAVKKRKTSSDLSAA-------------QEFGLGVAVDT---EPWDVIVAVQKGTILGTAFHPEFTSDQRWHKHFLSMVNTAASS 268          
BLAST of mRNA_Ecto-sp13_S_contig6992.18013.1 vs. uniprot
Match: A0A7S1UCM2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCM2_9STRA)

HSP 1 Score: 229 bits (584), Expect = 4.360e-67
Identity = 129/267 (48.31%), Postives = 162/267 (60.67%), Query Frame = 1
Query:  115 VTIGILALQGAFAEHSSLLSKLGADVREVRLPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTSALETGSVGRKDGDSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLKEEADDRDXXXXXXXXXXLAAFFVEPNPSTAAVAGEGGGTGSGARTGEKEAPEVIVAIRKGNIVGTAFHPELTNDSRWHEYFV 915
            V +G+LALQGAF EH   L +LG   R+VR   E EG+DG+++PGGES+AMAL+GE  G +P LK +V  G+PVWGTCAGMILLSD AL QK+GGQ+LVGGL+V++CRNYFGAQ SS E   D S    G+   KD  +        VFIRAPA+LEAG GV V+  + + PC KA   +  + +  A                   VEP      V GE              A EVIVA+R+G+I+ TAFHPELT D RW +YF+
Sbjct:   13 VEVGVLALQGAFEEHIEQLEQLGVAGRQVRTAAELEGIDGLIMPGGESSAMALVGEADGFWPDLKAFVQSGKPVWGTCAGMILLSDTALAQKRGGQALVGGLDVKVCRNYFGAQISSMEAAFDCSVDAEGAPTEKDSCTG-------VFIRAPAILEAGEGVQVMASLVAAPCAKAARQLANEERVTA-------------------VEPAAKKPKVVGE--------------AREVIVAVRQGHILATAFHPELTEDLRWLKYFL 239          
BLAST of mRNA_Ecto-sp13_S_contig6992.18013.1 vs. uniprot
Match: A0A7S2FF77_9STRA (Glutaminase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FF77_9STRA)

HSP 1 Score: 227 bits (579), Expect = 3.030e-66
Identity = 120/274 (43.80%), Postives = 166/274 (60.58%), Query Frame = 1
Query:  115 VTIGILALQGAFAEHSSLLSKLGADVREVRLPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTSALETGSVGRKDGDSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLKEEADDRDXXXXXXXXXXLAAFFVEPNPSTAAVAGEGGGTGSGARTGEKEAPEVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKEAV 936
            +TIG+LA+QG+F+EH  ++  LG    E+RLP E +G+ GI+ PGGEST MA++GE  G+FP L+ WV  G+PVWGTCAGMILLSD A+ Q++GGQ+LVGGL+VE+CRNYFG+Q  S E+ L   A +  S        A K  + AVFIRAPA+++ GP V+VL +V + PC +A+     +L E+ +                              EGG              +VIVA R G ++ TAFHPE TND RWH+ F+++V ++V
Sbjct:   19 LTIGVLAIQGSFSEHVDIVRALGFPCTEIRLPEELKGVHGIIFPGGESTTMAIVGESTGIFPALRNWVQAGKPVWGTCAGMILLSDSAIFQREGGQALVGGLDVEVCRNYFGSQIQSCEMDLSVQAFDEISSEAHGTQPAAK--HSAVFIRAPAIMKCGPSVEVLARVSAAPCRQALQ----KLTEQGE----------------------------VSEGGPR------------DVIVAARHGALLATAFHPEFTNDRRWHQLFLQMVTDSV 246          
BLAST of mRNA_Ecto-sp13_S_contig6992.18013.1 vs. uniprot
Match: A0A7S2EIR1_TRICV (Glutaminase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EIR1_TRICV)

HSP 1 Score: 216 bits (551), Expect = 2.090e-61
Identity = 137/303 (45.21%), Postives = 172/303 (56.77%), Query Frame = 1
Query:  115 VTIGILALQGAFAEHSSLLSK---LGADVREVRLPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQKK---GGQSLVGGLNVEICRNYFGAQTSSFEVPLDTS-ALETGSVGRKDGDSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLK--EEADDRDXXXXXXXXXXLAAFFVEPNPSTAAVAGEGGGTGSGARTGEKEAP--------------------EVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKEAV 936
            VTIG+LALQGAF EH SLL     L    R+VR P E EGLDGIV PGGESTAM LIG++ G++  LK +VS GRPVWGTCAGMILL++  +        GQ+L+GG++V +CRNYFG+Q SSFE+       LE G      GD      YP VFIRAPA+L AGPGV+VL +V + PC +A  V++   K  E  +D             +   ++       V GE      G    +KEAP                    EVI A+R+ N++ TAFHPELT D RWH YF  +V+E V
Sbjct:   10 VTIGVLALQGAFEEHQSLLESTPHLTVATRQVRTPSELEGLDGIVFPGGESTAMGLIGKQNGMWDALKDYVSSGRPVWGTCAGMILLAERCVGTSAVIAEGQALIGGVDVLVCRNYFGSQISSFEMATPAPPGLEEG------GD------YPGVFIRAPAILSAGPGVEVLGRVVATPCRQAAVVLRELEKKIEAGEDVVTMGVVDALVRKSEQEIDYIEVKKTVEGEVADDADGQEE-KKEAPLMEAQPRIELPGAADGTNAREVICAVRRDNVLCTAFHPELTGDVRWHAYFADMVQEDV 299          
BLAST of mRNA_Ecto-sp13_S_contig6992.18013.1 vs. uniprot
Match: A0A6B1FWG2_9CHLR (Pyridoxal 5'-phosphate synthase subunit PdxT n=1 Tax=Caldilineaceae bacterium SB0675_bin_29 TaxID=2605266 RepID=A0A6B1FWG2_9CHLR)

HSP 1 Score: 209 bits (531), Expect = 7.970e-60
Identity = 116/272 (42.65%), Postives = 150/272 (55.15%), Query Frame = 1
Query:  115 VTIGILALQGAFAEHSSLLSKLGADVREVRLPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTSALETGSVGRKDGDSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLKEEADDRDXXXXXXXXXXLAAFFVEPNPSTAAVAGEGGGTGSGARTGEKEAPEVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKE 930
            V +G+LALQGAF EH ++L +L  +  EVRL  E +GLDG+++PGGEST+M L+ ERWG+   L++WV  G+P WGTCAGMILL+++A  QK GGQ+L+GGLNV + RNYFG Q  SFE  LD  AL         GD+    P+ AVFIRAPA+ E   G++ L  V             A L +E +                                                VI A+RKG I+ TAFHPELT+D RWH YFV++V E
Sbjct:    4 VRLGVLALQGAFREHIAMLKRLNVEAVEVRLAQELDGLDGLIIPGGESTSMGLVAERWGLVEPLRRWVRGGKPTWGTCAGMILLAENATGQKLGGQALIGGLNVTVNRNYFGRQVDSFEANLDVPAL---------GDA----PFHAVFIRAPAITEVAEGIETLATV-------------ASLGDETES-----------------------------------------------VIAAVRKGPILATAFHPELTDDLRWHRYFVKVVTE 202          
BLAST of mRNA_Ecto-sp13_S_contig6992.18013.1 vs. uniprot
Match: A0A7S2KRD6_9STRA (Glutaminase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KRD6_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.080e-59
Identity = 123/290 (42.41%), Postives = 176/290 (60.69%), Query Frame = 1
Query:  115 VTIGILALQGAFAEHSSLLSKLGADVREVRLPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDH-----ALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTSALETGSVGRKDGDSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLKEEADDRDXXXXXXXXXXLAAFFVEPNPSTAAVAGEGGGTG---------SGARTGEKEAPEVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKEAVSA 942
            +T+G+LALQGAF EH   L +LG    +V+ P + EGLDGIV PGGESTAM LIG++ G++  LK++ ++ +P WGTCAGMILL+D      A++Q+  GQSL+GG++V  CRNYFG+Q SSFE+P+          G +DG       +P VFIRAPA+L A  GV+VL +V + PC +A  V+K+  ++ A+  +            +   +  P +  +  E               GA  G  EA EVI ++RK N++ TAFHPE+T D RWH YF+ +VK+A ++
Sbjct:    7 LTVGVLALQGAFEEHQYCLEQLGCKTIQVKTPDQLEGLDGIVFPGGESTAMGLIGKKTGIWDALKEF-TQTKPTWGTCAGMILLADKCVGTSAVIQE--GQSLIGGMDVLACRNYFGSQVSSFEMPIPPPP------GHEDGGD-----FPGVFIRAPAILAAADGVEVLGRVVATPCRQAGAVLKSLDEKIANGENVIMMKVVSDPWISGVKDGVPKSNEICEEKKSESLTAQESIVLPGAADGS-EAREVICSVRKDNLLCTAFHPEITQDYRWHSYFLGMVKDAATS 281          
BLAST of mRNA_Ecto-sp13_S_contig6992.18013.1 vs. uniprot
Match: A0A7R9ZBI2_9STRA (Glutaminase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBI2_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.570e-59
Identity = 134/320 (41.88%), Postives = 173/320 (54.06%), Query Frame = 1
Query:  115 VTIGILALQGAFAEHSSLLSKLG------ADVREVRLPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQK---KGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTSALETGSVGRKDGDSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLKEEADDRDXXXXXXXXXXLAAF-----FVEPNPSTAAVAGEGG--GTGSGARTGEKE----------------------------APEVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKEAVSA 942
            +TIG+LALQGAF EH +LL  L          R++R P E +G+DGIV PGGESTAM LIG R G++  LK +V  GRPVWGTCAGMILL++  +      + GQ+L+GG+NV +CRNYFG+Q SSFE+         G V            +P VFIRAPA+L AG  V+VL KV + PC +A  V++   K+     D          +        +VE   S+     E G   T  GA + E+E                            A EVI A+RKGN++ TAFHPELT D RWH YFVR+V  ++SA
Sbjct:    8 MTIGVLALQGAFVEHQTLLESLCPPSGWVVKTRQIRSPEELDGIDGIVFPGGESTAMGLIGSRNGMWDALKAFVRSGRPVWGTCAGMILLAERCVGASAVIEDGQALIGGVNVLVCRNYFGSQISSFEMATPPPPGLHGDV------------FPGVFIRAPAILSAGEDVEVLGKVVATPCRQAAVVLRELEKKIEAGEDVVMMGVVDALVRKSSQEIEYVEVKKSSPMGGVEDGVPRTKDGAESFEEEKKEGISTEEEQQMERPKIELPGAADGTNAREVICAVRKGNVLCTAFHPELTGDDRWHTYFVRMVTTSLSA 315          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6992.18013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWN1_ECTSI1.010e-17084.36Glutaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A835YX69_9STRA4.670e-8956.62Glutaminase n=1 Tax=Tribonema minus TaxID=303371 R... [more]
K8YT50_NANGC1.440e-7547.86Glutaminase n=3 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A7S2RJG7_9STRA9.830e-7546.76Glutaminase n=1 Tax=Rhizochromulina marina TaxID=1... [more]
A0A7S1UCM2_9STRA4.360e-6748.31Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2FF77_9STRA3.030e-6643.80Glutaminase n=1 Tax=Dictyocha speculum TaxID=35687... [more]
A0A7S2EIR1_TRICV2.090e-6145.21Glutaminase n=1 Tax=Trieres chinensis TaxID=151414... [more]
A0A6B1FWG2_9CHLR7.970e-6042.65Pyridoxal 5'-phosphate synthase subunit PdxT n=1 T... [more]
A0A7S2KRD6_9STRA1.080e-5942.41Glutaminase n=1 Tax=Leptocylindrus danicus TaxID=1... [more]
A0A7R9ZBI2_9STRA1.570e-5941.88Glutaminase n=1 Tax=Pseudictyota dubia TaxID=27499... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6992contigEcto-sp13_S_contig6992:285..4748 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score505.8
Seed ortholog evalue1.6e-140
Seed eggNOG ortholog2880.D7FWN1
Preferred nameSNO1
Model size2008
KEGG rclassRC00010,RC01783,RC03043
KEGG koko:K01288,ko:K06215,ko:K08681
KEGG ReactionR07456
KEGG Pathwayko00750,map00750
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004359,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009987,GO:0010941,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051186,GO:0051188,GO:0060548,GO:0065007,GO:0071704,GO:0072524,GO:0072525,GO:0072527,GO:0072528,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600
Exons5
EggNOG free text desc.pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
EggNOG OGsCOG0311@1,KOG3210@2759
Ec32 ortholog descriptionClass I glutamine amidotransferase-like
Ec32 orthologEc-06_001280.1
EC3.4.16.6,4.3.3.6
Cds size978
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6992.18013.1prot_Ecto-sp13_S_contig6992.18013.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6992 1261..4694 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463958.515838-UTR-Ecto-sp13_S_contig6992:284..12601681463958.515838-UTR-Ecto-sp13_S_contig6992:284..1260Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6992 285..1260 -
1681463958.5793328-UTR-Ecto-sp13_S_contig6992:4694..47481681463958.5793328-UTR-Ecto-sp13_S_contig6992:4694..4748Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6992 4695..4748 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463958.5284724-CDS-Ecto-sp13_S_contig6992:1260..17071681463958.5284724-CDS-Ecto-sp13_S_contig6992:1260..1707Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6992 1261..1707 -
1681463958.5384462-CDS-Ecto-sp13_S_contig6992:2146..23021681463958.5384462-CDS-Ecto-sp13_S_contig6992:2146..2302Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6992 2147..2302 -
1681463958.549752-CDS-Ecto-sp13_S_contig6992:2968..31501681463958.549752-CDS-Ecto-sp13_S_contig6992:2968..3150Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6992 2969..3150 -
1681463958.5596268-CDS-Ecto-sp13_S_contig6992:4231..43371681463958.5596268-CDS-Ecto-sp13_S_contig6992:4231..4337Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6992 4232..4337 -
1681463958.5690522-CDS-Ecto-sp13_S_contig6992:4607..46941681463958.5690522-CDS-Ecto-sp13_S_contig6992:4607..4694Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6992 4608..4694 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6992.18013.1

>prot_Ecto-sp13_S_contig6992.18013.1 ID=prot_Ecto-sp13_S_contig6992.18013.1|Name=mRNA_Ecto-sp13_S_contig6992.18013.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=326bp
MTAPVPPAGEASVTGQPIRRVTIGILALQGAFAEHSSLLSKLGADVREVR
LPHEFEGLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAG
MILLSDHALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLDTSALETG
SVGRKDGDSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVM
KAQLKEEADDRDDDTRRAKRRRLAAFFVEPNPSTAAVAGEGGGTGSGART
GEKEAPEVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRIVKEAVSAGAGG
VRDAESSTKAPAGAAAAAEAEVAMA*
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mRNA from alignment at Ecto-sp13_S_contig6992:285..4748-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6992.18013.1 ID=mRNA_Ecto-sp13_S_contig6992.18013.1|Name=mRNA_Ecto-sp13_S_contig6992.18013.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4464bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6992:285..4748- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCAGTCAACAGTCGCTCCCACTCTTCGGGTTGCAACACACACTCACAG AGAGATGACCGCTCCAGTACCTCCAGCCGGTGAAGCCAGCGTCACTGGCC AACCAATACGCCGAGTAACGATCGGCATTCTCGCGCTGCAGGTGAGAACA GAGAAGCTCTACCGCTGTATGTACAGCAGTTGGCTGTTTGAATCTCGAAA GCCCACGCCTGACTGGACACAAGAAACATGATTGGGAACGGTGCGATTGG AGACGTGGGTTTGTGCAGACTGCCCATCCTTCCATACAGGCATTAGTGCA GGACGAAGCCTCCATGCCTCTGCCTGTGTATAGCTTCAGTGTTGGTCTAG CATAGGCACGGACACCTCATTTCGCTCTGTGTCCTAATATGCATTTCATC TCCTGCAACAGGGGGCGTTTGCCGAGCACTCTTCGTTGCTGTCCAAGCTT GGTGCTGACGTTCGAGAGGTGCGGCTGCCGCATGAGTTCGAGGGACTGGA CGGGATCGTCCTTCCAGGTAACTCCCTATAGCTGCGAGGGTTCCCCCCTC GTTGTCCTTGCAGTACCCTGCAGGCCGGGTGGAAGGGTGGATGTTCCGAA GCGTTAGGGTAGTGTGACCTCGGGTCGTTGGTTGTCTCGGAGAATTTGAG GACAGCACTTGTGGGGAAAGTGTCCATCTCCAGCTGTGTACATTGTAGCA TGTCCTGGGTAATGAGCGGTGCTAGGGTACATGCAAAAAGTACAGCAGTA GTGACATACGGTGTTCGAGATTGACCCACTGGCTGCGGCTCCAGAGGACA ATTCGCAGACGCGCGGAAATCAGACAGTCCACATTGACGGAGAGGCGTGG TGCGGATGCTGCAGGAGTCTCATAGTCAAGCTACCCTGGCACCTGCTGTG TCAAATATATGTCGCATGGCTACCTTCTAGTGCTGGGCCCTCCAGTAGTC TCCAGGTATGCCTAGTAGTCTGTCTACAGCAGTAGTTTACATTGTATGTA CTATGAAAACCAGGAAAATAAAAATACCCAACACACCCCAATACATGTTT GTTCATACAGTAGCAAGAAACAAATAGCACACACACCACGAATTCTCATC ACCCCATCCAATCCGAATAGAAGCTTGTGACTTGTGACTGAAGGCTTCCC CTTTTTCTGTAGTAAAGTCTCTTCCGTGTACAATATACCGCTACCCTCTT GCGACGTAATTCTTGAGGCCATGGCCACGGCCTGTGGAGTGGCGGTAGCA GGGGCACTTCGCCGGGGGCTCCATCGCTAGGCAACCAAAGCTTATGCTGA GAGCGCTCCTACCTTGTCTCGTGACTGATTCATTCCTCTATGGTATTGTG GGTAGCAGACAGACGCCCCCTCGTCAACGCTCTACATGCTCCTACGCCAC CGAGGCATCCCTCACCTCAGCCCCTTGGAAGCCTTTGCCCCGATTCTTGC CACTGCAGTATCATGACTCTCTTGTTGGCTCTCGTTGACAACCAGATTGC CAGAAACCGTTACCCACCGGCACCCAACAAGTTCTGCCTGGACTAACTTT TTCCGCTTCATTGGCTATATGCATACATGTGGAACACATCGAGTAAAGGC GGCGAGAGCACCGCCATGGCACTTATCGGCGAGAGGTGGGGGGTGTTCCC GCGGCTGAAGCAGTGGGTGTCGGAGGGACGCCCGGTCTGGGGAACTTGCG CCGGCATGATCCTCCTGTCCGACCACGCCCTCATGCAGAAGAAGGGGGGG CAATCTCTCGTTGGGGGGCTCAATGTGGAGGCAAGTCCCGGAGAATTGAC ACAACACGGTTGATTGATTGATTGCTTGGTCCAAGATTTGTGTGAATGAA TCTGTAGTTCTCTTGCGGCTCCAAAGCTAGAAAATGCTCAGCAACGGGCA ATCCCAGGTGATGAGATTGTTTACTAAAAGCTACTGTCGTTGAAGACCAT CAATTTAGCGCAATTGCTTTGTCACTGTCTGTCTGCCTCTCTAGCTCTTG GCTGCCTTTTGTTAGCCTGTCATGACTCTTGGAGGGATGAGCCACGATGG TTGCGATTGGGACGCGTTGACGATGGTCGTTGGTACGTATGTGCCACACC TCGAGTTGAGGGGCCCTGGCCGATTTCTTTTCTCTCCACTAGTGCTAAAA TGGTCGTTGCCCCAGCGCAGGTGTCTTGGATATGGACCGTTCTGCATTTT TGCTCTCACGTCGTTACTAGATGACATTTCATTTTAGTGCTTGTGGTGTT TACTTTGAATGGGGCCACACACGGCCATGTCAGCCTTGTTGTTGCGGAGT GAACGAAAAACACAGATCAAGAACCTAGGCGGAATCATGGCACCAAGTTT GGATATCAGTACCCCCCGCCCCCCTCCCCACGCCACGCCGCCCCTCTCCC TCCTTTTGTGCGCGCCAAAATTCGTCTCAACTTCTGTGGACTCCAGATTT GTAGAAACTACTTCGGCGCGCAGACGTCCAGCTTCGAGGTGCCGCTCGAC ACTTCGGCGCTCGAAACCGGGTCGGTCGGTCGAAAGGATGGGGATTCGGC AAACAAGAACCCGTACCCCGCCGTGTTCATTCGCGCGCCGGCGGTTCTAG AGGTAAAGCTGTGCATCTGTGTGTGTTGCTTGAGTTGTTGGAGGTGTATC TATGCGAGCGTGATTGGTGGGATTCCACGGGGCACCGCAGAGCGCACCAA TCGGGGGTGTCTCTCACAACTATATTCAGGAACAATCACTTTCTCTCTCC CTCTCTCGTCCTCTGCCGAGAAGAAAGTGCCATTCGGCATCATGGGTTGG CGATGTATGCGGAACGGTTATTTATTGTCGAGATAGCAAGAGCAGGAACC AACCCCTCGTTCCATGCAAGATAATTTGAAAGTTCGGAAATCGTCCAAAG ATTGGGAGATGCCTCGTGTCAGAAATACGTTACGGTGTTCTGTCTCGAAA AGAGACGCACGCGTGTTGAACAGGAGAGGAAGCCAAGGAATTATTGCGTT CACCCCATACGACCACCCCACCCCGCCTCATCGACCTACAGGCCGGTCCC GGCGTCGACGTCCTCTGCAAGGTGCGATCTAGGCCGTGCAACAAAGCTGT CACCGTCATGAAGGCACAGCTAAAAGAAGAAGCAGACGACCGCGACGATG ACACCCGCAGAGCGAAACGCAGAAGGCTAGCCGCGTTTTTCGTCGAGCCT AATCCGTCGACGGCGGCTGTTGCGGGGGAGGGTGGCGGGACGGGCAGCGG TGCTCGCACCGGAGAGAAAGAAGCTCCCGAGGTGATCGTCGCAATCCGTA AGGGCAACATCGTGGGAACCGCGTTTCACCCCGAACTCACAAACGACTCC CGCTGGCACGAGTACTTCGTGAGGATAGTCAAGGAGGCGGTAAGCGCAGG GGCCGGGGGGGTCCGCGATGCAGAATCTTCCACGAAAGCGCCTGCTGGTG CCGCTGCAGCAGCTGAGGCCGAGGTTGCCATGGCGTAGACGCGGCACGGG CTCCGACTCGAAGATTTTGGGCCAGTCAGGGATGTTCGACGAGCCCCTCC CACTTTCCACACGCTGCTGTCCGATGTTGATGTTTTTGATATCCCCCATT TGAATCCTTGGAAAGGTCGTCCACGGGGAGGTCGTTTTGTACTTGTTCAA GTTTGCCGACGAAGCAGTCCGTTGTGTCATTGTTCGGTGTCTCCCGCCAA AGTGAAACGGCAGCTGTTGAATGATCAAGTACCAATTGTTTTTGCACATG CACTGACTGCTTGTTTTTTCCCCGGCGGTTGTCCTCTGGCGGCGACCAAG CAGATTTTTGAGGCGAAGTTTCACGCATGTGTGGGTGTGCGTCATTCTTA ACGCGTTTTAGGTTTGAGTAAAGGTGTTTTTGGAAAGGGGCATGACAGAG AGAGGCCCTTAGCTTAGCTTGTGTCGGTGGTGGTGTTGCGAGATTTCGCG TGATATCCCGTTTTTGTAGTGTGCACGCCGGGAAACCAAGGCCACAGCGC TGCTGCTGTTGCTTTTGTACATACGATGCCTGCTGGCCGGTTGGCGCGCT GACCACGCCTCTTGATAAATGCAGAGCACCGTGGAAGGAGTTAGTGATGA GAGTTGACTTGCTTGAGAGGCGAGAAAGTTTACTTCGGGCGGATTACGGG TATGATGGGATGGATCATCATTCGATGGTGTGGTGAGGTCTATGGCTGGT GTAACGTCAACGCGTGGTATATTGCGACCGGAGGAGCGACGTGACAAGGG GTGGTTGTGATGTGCTTCAGTTGCTAAGACGAAAACATTCATCTTACTCT TCGACGATGATGTCCGAAGCGGCTTTGCTTTGGCGGAATGTCCGCTTTGT GGGCGGCTCCGTGAGCAGAAGCACGTGACCCTCCGGGGCTGTCAGGTTCA AAACGTGTAATTCTCTCAGCGTACGCATCGTAACCCCTCTCTTTTGTGCT CTGTGCAACATGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6992:285..4748-

>mRNA_Ecto-sp13_S_contig6992.18013.1 ID=mRNA_Ecto-sp13_S_contig6992.18013.1|Name=mRNA_Ecto-sp13_S_contig6992.18013.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=978bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6992:285..4748- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACCGCTCCAGTACCTCCAGCCGGTGAAGCCAGCGTCACTGGCCAACC
AATACGCCGAGTAACGATCGGCATTCTCGCGCTGCAGGGGGCGTTTGCCG
AGCACTCTTCGTTGCTGTCCAAGCTTGGTGCTGACGTTCGAGAGGTGCGG
CTGCCGCATGAGTTCGAGGGACTGGACGGGATCGTCCTTCCAGGCGGCGA
GAGCACCGCCATGGCACTTATCGGCGAGAGGTGGGGGGTGTTCCCGCGGC
TGAAGCAGTGGGTGTCGGAGGGACGCCCGGTCTGGGGAACTTGCGCCGGC
ATGATCCTCCTGTCCGACCACGCCCTCATGCAGAAGAAGGGGGGGCAATC
TCTCGTTGGGGGGCTCAATGTGGAGATTTGTAGAAACTACTTCGGCGCGC
AGACGTCCAGCTTCGAGGTGCCGCTCGACACTTCGGCGCTCGAAACCGGG
TCGGTCGGTCGAAAGGATGGGGATTCGGCAAACAAGAACCCGTACCCCGC
CGTGTTCATTCGCGCGCCGGCGGTTCTAGAGGCCGGTCCCGGCGTCGACG
TCCTCTGCAAGGTGCGATCTAGGCCGTGCAACAAAGCTGTCACCGTCATG
AAGGCACAGCTAAAAGAAGAAGCAGACGACCGCGACGATGACACCCGCAG
AGCGAAACGCAGAAGGCTAGCCGCGTTTTTCGTCGAGCCTAATCCGTCGA
CGGCGGCTGTTGCGGGGGAGGGTGGCGGGACGGGCAGCGGTGCTCGCACC
GGAGAGAAAGAAGCTCCCGAGGTGATCGTCGCAATCCGTAAGGGCAACAT
CGTGGGAACCGCGTTTCACCCCGAACTCACAAACGACTCCCGCTGGCACG
AGTACTTCGTGAGGATAGTCAAGGAGGCGGTAAGCGCAGGGGCCGGGGGG
GTCCGCGATGCAGAATCTTCCACGAAAGCGCCTGCTGGTGCCGCTGCAGC
AGCTGAGGCCGAGGTTGCCATGGCGTAG
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