mRNA_Ecto-sp13_S_contig6991.18012.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6991.18012.1
Unique NamemRNA_Ecto-sp13_S_contig6991.18012.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6991.18012.1 vs. uniprot
Match: A0A6H5LNG1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNG1_9PHAE)

HSP 1 Score: 487 bits (1254), Expect = 1.250e-167
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1 
Query:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQST 723
            MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQST
Sbjct:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQST 241
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BLAST of mRNA_Ecto-sp13_S_contig6991.18012.1 vs. uniprot
Match: D7G3N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N5_ECTSI)

HSP 1 Score: 464 bits (1194), Expect = 5.430e-165
Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 1 
Query:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAE 690
            MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPG+SRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAE
Sbjct:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGISRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAE 230
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BLAST of mRNA_Ecto-sp13_S_contig6991.18012.1 vs. uniprot
Match: A0A835Z323_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z323_9STRA)

HSP 1 Score: 414 bits (1065), Expect = 5.580e-142
Identity = 197/241 (81.74%), Postives = 224/241 (92.95%), Query Frame = 1 
Query:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQST 723
            MSSM+LS  Q+NE+LFVGFNQD GCFACGTDNGFRIYNVDPFRETFRRVFS  G+GIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQ+RCIGELSFRSEVKAV+LRRDRVVV LA +IYVYRFSDL LLD+INTI+N+ GL+ALC D+SNMVLACPG+SRGHVNVELYD R+STL+PAHES+LAQLAL+ DG +VATAS +GTL+RVFDT +G+L+ ELRRGMDRA+++SICFNQ S+
Sbjct:    1 MSSMNLSKEQENEILFVGFNQDSGCFACGTDNGFRIYNVDPFRETFRRVFS-AGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVALAHKIYVYRFSDLKLLDQINTIKNESGLLALCPDSSNMVLACPGISRGHVNVELYDTRKSTLVPAHESDLAQLALNSDGSLVATASDKGTLIRVFDTSSGALVQELRRGMDRADITSICFNQTSS 240
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BLAST of mRNA_Ecto-sp13_S_contig6991.18012.1 vs. uniprot
Match: A0A4D9CZG2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZG2_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 2.790e-134
Identity = 187/241 (77.59%), Postives = 216/241 (89.63%), Query Frame = 1 
Query:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQST 723
            MSSMSL+ +Q+NELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRR+F NGGIGIVEMLFR NL+ALVGGGRNPR+PPNKVMIWDDHQ+RC+GELSFRSEVKAV+LRRDRVVVVL  +IYVYRF DLHL D+++T+ N +GLVALC D +N VLACPG+++G V VELYD R+STLIPAHESELAQ+AL++DG  +ATAS +GTL+RVFDT +G LL ELRRGMDRAE+ S+ FN  ST
Sbjct:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALCPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASST 241
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BLAST of mRNA_Ecto-sp13_S_contig6991.18012.1 vs. uniprot
Match: W7U6T1_9STRA (Wd repeat domain phosphoinositide-interacting protein 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6T1_9STRA)

HSP 1 Score: 390 bits (1002), Expect = 5.780e-133
Identity = 186/241 (77.18%), Postives = 215/241 (89.21%), Query Frame = 1 
Query:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQST 723
            MSSMSL+ +Q+NELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRR+F NGGIGIVEMLFR NL+ALVGGGRNPR+PPNKVMIWDDHQ+RC+GELSFRSEVKAV+LRRDRVVVVL  +IYVYRF DLHL D+++T+ N +GLVAL  D +N VLACPG+++G V VELYD R+STLIPAHESELAQ+AL++DG  +ATAS +GTL+RVFDT +G LL ELRRGMDRAE+ S+ FN  ST
Sbjct:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASST 241
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BLAST of mRNA_Ecto-sp13_S_contig6991.18012.1 vs. uniprot
Match: A0A067CH88_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CH88_SAPPC)

HSP 1 Score: 370 bits (951), Expect = 6.690e-126
Identity = 174/240 (72.50%), Postives = 207/240 (86.25%), Query Frame = 1 
Query:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQS 720
            M++M+LS  Q+NELLFVGFNQDYGCFACGTD GFRIYN DPF+ETFRR FS+GGIGIVEMLFRCN+LA+VGGGRNPRYPPNKVMIWDDHQSR IGELSFRSEVKAV+LRRDRVVVVL  +IYVY F+DL LLD I TI N +GLVALC  ++N VLACPGVSRG V +ELYD R++TLI AHE++L+Q+ L+++G  +ATAS +GTL+R+FDT +G L  ELRRG D+AE+ S+CF+  S
Sbjct:    1 MAAMNLSREQQNELLFVGFNQDYGCFACGTDTGFRIYNCDPFKETFRRDFSSGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFADLKLLDHIETIANPKGLVALCPSSTNTVLACPGVSRGTVRIELYDQRKTTLITAHEADLSQMCLNLEGTRLATASDKGTLIRIFDTQSGQLTQELRRGADKAEIYSVCFSPNS 240
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BLAST of mRNA_Ecto-sp13_S_contig6991.18012.1 vs. uniprot
Match: A0A485KXM0_9STRA (Aste57867_13230 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KXM0_9STRA)

HSP 1 Score: 370 bits (951), Expect = 6.210e-125
Identity = 177/243 (72.84%), Postives = 210/243 (86.42%), Query Frame = 1 
Query:    1 MSSMSLSNNQKNELLFVGFNQDYG---CFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQS 720
            MSSM+LS  Q+NELLFVGFNQDYG   CFACGTD GFRIYN DPF+ETFRR FS+GGIGIVEMLFRCN+LA+VGGGRNPRYPPNKVMIWDDHQSR IGELSFRSEVKAV+LRRDRVVVVL  +IYVY FSDL LLD I TI N +GL ALC +++N VLACPGVSRG V +ELYD+R++TLI AHE++L+Q+AL+++G  +AT+S +GTL+RVFDT +G L+ ELRRG D+AE+ S+CF+  S
Sbjct:   42 MSSMNLSREQQNELLFVGFNQDYGTMRCFACGTDTGFRIYNCDPFKETFRRDFSSGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLLDHIETITNPKGLCALCPNSTNTVLACPGVSRGTVRIELYDMRKTTLITAHEADLSQMALNLEGTRLATSSDKGTLIRVFDTQSGQLMQELRRGADKAEIYSVCFSPNS 284
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BLAST of mRNA_Ecto-sp13_S_contig6991.18012.1 vs. uniprot
Match: A0A7S3JWF9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWF9_9STRA)

HSP 1 Score: 358 bits (919), Expect = 4.100e-120
Identity = 167/231 (72.29%), Postives = 202/231 (87.45%), Query Frame = 1 
Query:   28 QKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQS 720
            +K+ELLFV FNQD+GCFACGT++GFRIYNVDPF+ETFRR F  GGIGIVEMLFRCNLLALVGGG +PRYPPNKVMIWDDHQ+RCIGELSFRSEVKAV+LRRDRVVV LA ++YVYRFSDL LLD+I+T  N +GL ALCAD ++ VLACPGV++GHV +ELYD R+ST++ AHES+L +LAL+ DG +VATAS +GTL+R+FDT TG+ + ELRRG+DRA + +I F+  S
Sbjct:   16 EKSELLFVSFNQDFGCFACGTESGFRIYNVDPFKETFRRAFRGGGIGIVEMLFRCNLLALVGGGSSPRYPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVALATKVYVYRFSDLKLLDQISTQVNSRGLAALCADPAHNVLACPGVNKGHVRIELYDSRKSTIVAAHESDLCRLALNSDGSLVATASDKGTLVRIFDTHTGAQVRELRRGVDRAIIYAIAFDPDS 246
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BLAST of mRNA_Ecto-sp13_S_contig6991.18012.1 vs. uniprot
Match: W2LG63_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LG63_PHYPR)

HSP 1 Score: 354 bits (908), Expect = 5.930e-120
Identity = 168/228 (73.68%), Postives = 197/228 (86.40%), Query Frame = 1 
Query:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDR 684
            MS+M+LS  Q+NELLFVGFNQD GCFACGTD+GF+I+N DPF+ETF R FSNGGIGIVEMLFRCN+LA+VGGGRNPRYPPNKVMIWDDHQSR IGELSFRSEVKAV+LRRDRVVVVL  +IYVY FSDL L+D I TI N +GL ALC + SN VLACPGV+RG V +ELYDLR++TLI AHE+EL+Q+ L++DG  +ATAS +GTL+R+FDT +G +  ELRRG DR
Sbjct:    1 MSAMNLSREQQNELLFVGFNQDSGCFACGTDSGFKIFNCDPFKETFHRDFSNGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLVDHIETIANPKGLCALCPNPSNTVLACPGVTRGTVRIELYDLRKTTLITAHEAELSQICLNLDGTRLATASDKGTLIRIFDTQSGQITQELRRGADR 228
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BLAST of mRNA_Ecto-sp13_S_contig6991.18012.1 vs. uniprot
Match: A0A7S2CPD6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPD6_9STRA)

HSP 1 Score: 354 bits (908), Expect = 1.180e-118
Identity = 166/228 (72.81%), Postives = 201/228 (88.16%), Query Frame = 1 
Query:   37 ELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQS 720
            ELL++GFNQD+GCFACG DNGFRIYN +PF+ETFRR    GGIGIVEMLFRCNLLALVGGGRNP++PPN V IWDDHQ+R IGEL FRSEVKAV+LRRDRVVVVL  +IYVYRFSDL LLD+I+T++N +GL+ALC DASN+VLACPGV++G+V VELYD+R+S++IPAHESEL+Q+AL++DG  +ATAS +GTL+RVFDT TG +L ELRRGMDRA +  + FN+ S
Sbjct:    8 ELLYLGFNQDHGCFACGMDNGFRIYNCEPFKETFRRAMK-GGIGIVEMLFRCNLLALVGGGRNPKFPPNIVKIWDDHQNRAIGELMFRSEVKAVKLRRDRVVVVLLHKIYVYRFSDLKLLDQISTLKNPKGLIALCPDASNVVLACPGVTKGNVRVELYDMRKSSIIPAHESELSQIALNLDGTRLATASDKGTLIRVFDTHTGDILKELRRGMDRAVIHCVTFNKTS 234
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6991.18012.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LNG1_9PHAE1.250e-167100.00Reverse transcriptase domain-containing protein n=... [more]
D7G3N5_ECTSI5.430e-16599.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z323_9STRA5.580e-14281.74WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A4D9CZG2_9STRA2.790e-13477.59Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U6T1_9STRA5.780e-13377.18Wd repeat domain phosphoinositide-interacting prot... [more]
A0A067CH88_SAPPC6.690e-12672.50Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
A0A485KXM0_9STRA6.210e-12572.84Aste57867_13230 protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A7S3JWF9_9STRA4.100e-12072.29Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W2LG63_PHYPR5.930e-12073.68Uncharacterized protein n=12 Tax=Phytophthora para... [more]
A0A7S2CPD6_9STRA1.180e-11872.81Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6991contigEcto-sp13_S_contig6991:3292..7636 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score463.4
Seed ortholog evalue6.5e-128
Seed eggNOG ortholog2880.D7G3N5
Preferred nameWDR45B
Model size723
KEGG koko:K08876
Hectar predicted targeting categoryother localisation
GOsGO:0000045,GO:0000407,GO:0000422,GO:0001101,GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006464,GO:0006497,GO:0006807,GO:0006914,GO:0006950,GO:0006952,GO:0006970,GO:0006979,GO:0006996,GO:0007005,GO:0007033,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009058,GO:0009059,GO:0009414,GO:0009415,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009651,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0009991,GO:0010035,GO:0010150,GO:0010506,GO:0010508,GO:0016020,GO:0016043,GO:0016236,GO:0019222,GO:0019538,GO:0019898,GO:0022411,GO:0022607,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031667,GO:0032266,GO:0032501,GO:0032502,GO:0033036,GO:0034045,GO:0034497,GO:0034613,GO:0034645,GO:0035091,GO:0036211,GO:0042157,GO:0042158,GO:0042221,GO:0042594,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0044804,GO:0048366,GO:0048367,GO:0048518,GO:0048522,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051179,GO:0051641,GO:0051704,GO:0051707,GO:0061726,GO:0061919,GO:0065007,GO:0070727,GO:0070925,GO:0071704,GO:0071840,GO:0080025,GO:0090693,GO:0098542,GO:0098805,GO:0099402,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901981,GO:1902936,GO:1903008,GO:1905037
Exons5
EggNOG free text desc.phosphatidylinositol-3,5-bisphosphate binding
EggNOG OGsKOG2111@1,KOG2111@2759
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-00_006630.1
Cds size723
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463958.4190125-CDS-Ecto-sp13_S_contig6991:3291..33611681463958.4190125-CDS-Ecto-sp13_S_contig6991:3291..3361Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6991 3292..3361 +
1681463958.4325123-CDS-Ecto-sp13_S_contig6991:4519..46951681463958.4325123-CDS-Ecto-sp13_S_contig6991:4519..4695Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6991 4520..4695 +
1681463958.4416208-CDS-Ecto-sp13_S_contig6991:5495..58131681463958.4416208-CDS-Ecto-sp13_S_contig6991:5495..5813Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6991 5496..5813 +
1681463958.4504566-CDS-Ecto-sp13_S_contig6991:6841..69371681463958.4504566-CDS-Ecto-sp13_S_contig6991:6841..6937Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6991 6842..6937 +
1681463958.4592123-CDS-Ecto-sp13_S_contig6991:7573..76361681463958.4592123-CDS-Ecto-sp13_S_contig6991:7573..7636Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6991 7574..7636 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6991.18012.1prot_Ecto-sp13_S_contig6991.18012.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6991 3292..7636 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6991.18012.1

>prot_Ecto-sp13_S_contig6991.18012.1 ID=prot_Ecto-sp13_S_contig6991.18012.1|Name=mRNA_Ecto-sp13_S_contig6991.18012.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=241bp
MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVF
SNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFR
SEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCAD
ASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVAT
ASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQST
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mRNA from alignment at Ecto-sp13_S_contig6991:3292..7636+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6991.18012.1 ID=mRNA_Ecto-sp13_S_contig6991.18012.1|Name=mRNA_Ecto-sp13_S_contig6991.18012.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4345bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6991:3292..7636+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTAGCATGAGCCTCAGCAACAACCAGAAGAACGAACTCCTGTTCGT
GGGCTTCAACCAAGACTACGGTGAGTTGGCCTACTTTATTTATTCACATC
TTCCGTGATTTTGCCCGCCTTCATGCACGACATCACGATTCTGTTCAAAA
TGGCAATAGACAGTAGAGCGTGCCAGGTGTCAGCAAATCGAGAAATAGTG
CGAGTGCGTGGTATCACACACCATACACCACGCTGTTGGATCGCATCGAA
CTGGATCGCCACTTCGATTGTGTCAGGAGACGACTCCGAGGAGGCGTTAA
TCGTTTTTTTTCGGCCTTTCAATTCGCAATCCATGTTGGAGACCGCGAAG
TACACGACGTCGCGGCCGGGCTGTAGAGCCGTTGCCGAGCTTTGCGTAGT
GTGTAGACATACGCTTCGTAGATGGACCTTCCGGCGGGTATATCCTACCA
CAAATGCCCGCGGGTGTGAAGACAGGCAGGGCTTCGTTGAAATCCGTATG
ACGCGTCACGCTATTTTGTTTCGAACAGGCCATGCAGCTGAACCTTGGGA
GTGAGTCACTCCGCCGTTCCCACAACCGTGTTTCTTCGTACAAGTAACAG
GCGCACCGGTCTACTATAGCGTTCGCTTCATTTTCCGCCAGTTTTTGGAC
TTATCTTGACAAACGAGATCATGCCAGCAACTTCATGCCTTCTTTGTTTT
GAATCCCGAAACATCGGGTTCAGGGCAAAGTGTAAAGCGGACGCCCTTGC
TTTAGTTTGTTTTCCTTCGAAGGCGGTGATGGCATGGTACGCGATGAAAC
CCAGCCGGTTTCGCTGCAAAGATTAAGCGTGTTTGGTTTTGTGTCGACAT
CGGGCCCGGGCGAAACACGGTTTTATCAAAGCAACAACACCGAATGACCA
CCACCACGTGGTACACGGTACTGCTGTGAAACCCTTTCGATTTCGGTAGA
GCAAGCGTGTTTGGCTTTGTGTCGATATCGGGCCCGAACTACGGCTTTGT
AACAACTAGAATATTGACGACAATAGCAGCAACAACAAACACCACCACTT
GATGGCACACGATACTGCAATGAAACCCGTTCGGCTTCGGTAGAGCAGGC
GTGTTTGGTCTTGTGTCGATATCGGGCTTGAGAGAAACACGCCTTACTAC
AAACAACAACAAACGACATCACGCCGACACCATCACAAAACGCCAACGAG
AACAAACAATGTCCTGCTGCTGTGTAAGGGTGTTTCGCCTGCGGCACGGA
CAACGGCTTCCGCATCTACAACGTCGACCCGTTCCGAGAGACCTTCCGCA
GGGTTTTCAGCAATGGGGGCATCGGCATCGTCGAGATGTTGTTCCGCTGC
AATTTGCTGGCACTGGTCGGAGGGGGAAGAAACCCACGGTACCCTCCCAA
CAAGGTGAGATGCGGGGGGAGTGGGGGCGACTCTGTAAATTTTGTGCACG
TCTAGTCGTTAGACTATTGACCTCGCTTCCGGGACGGAGCAATGTTTGGC
CGGCCCAGGCGACGTTCCACAAGGTACGAAACAGGAGCTGGTCATCGTTC
TTTGGGGCTGGGGGAGACAGGGAAAGCTCCGAAGGCTAGGACAAAGGAAG
CGTGAAAGGGAGGAGAAGGGGAGATGGTGTGGTGCATGGCGAAACGTGAA
TGTATACGTTGTTACTGCGTTGTTGATCGGAACCGAATCGTGTCGCCTTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGGGCGGT
GAGGGCACGTATATGCAGCTGTGTTGGGACTTCAGCCGCAGCTGTGTTGG
GACTTAAGCCAAGCCTCCACACACGCGCGACATCAGTCTGTTCGTTGTTT
ATGTGCCAAAGCACAACCGTGCTCGATGGTGGATATCCTCGTATTTCCTC
CAACATGAGAGTACCGTTGCACGCAAGCGATAGTCTGCCCACATCCGCCA
AGATGTCATTGAGACCGAAGTTAGCAGCACGGGGCGGGGGAGGGGGAGGG
GTTCCCAGCTCCCTCCTTTGCGCAAGGGATAGGTGAGTCGTTTCTTCTTC
GATCTCTGTCTTTTTCAACACCCTGTGATGGCTCTTCAAACCCGTGAGCA
CTTCGACGGGATAAACTACGCATCGACCGGCGACGGCGTCTGCTCTGGAG
CACTCACCCCAATCGCACCGCCGTCTCTCCTTGACAAAAAAAAATATTCG
ACAGGTCATGATCTGGGACGACCATCAGAGCCGCTGCATCGGCGAGCTCA
GCTTCCGCAGCGAGGTCAAGGCCGTCCGCCTTCGCCGCGACCGCGTCGTC
GTCGTACTCGCCCAGCGCATCTACGTCTACCGCTTCTCTGACCTGCACCT
GCTCGACCGCATCAACACCATCCGCAACGACCAGGGGCTGGTCGCCCTCT
GCGCCGACGCCTCCAACATGGTGCTCGCTTGCCCCGGGGTCAGCCGCGGC
CACGTTAACGTGGAGCTCTACGATCTGAGGCGGTCCACGCTGATCCCGGC
CCACGAATCGGAGCTTGCCCAGGTTGGTTTAGAGGGTTTGGACCGGCGTT
TGTGTGTTTTTGGGGAGAATGTACTCATAGTCTTGCATGCTGTAGTCGTT
AGACCATTGAATTCGAATCCCTATAACTCCGGGACGGAGCGACATGCCGG
GTTTTCGCCGGCCCAAGCCACGTTTCACCAGCGTTTGATATACCAAACCA
GATACGCCAAGAGGGGAGGGGGGGAAGGGGTGCCCTTCATCATGCGGTGC
CGCAATCTTGAGGCTGAAATGATTTCGAGCGGGAGGGATATGGGGGTGGG
GGGCGTCGTCGTCGTTTTCTCTGTGCCGTTTGCTCCGGTGTCTTGGTGGT
GCACATGCCGGCCATCGGACGAACTGGGAAGCGAGGGGGCTCCGGGGTGT
TGCGAGGTGGCAGTGTGGGATTTCGATGCTACCTTTGCTTGCTTAAATTC
GAAAGGGTTTTGGCGGAGATAGTCGAGAATGTCCGTATTTTCAAGAGTGT
TTTTTTCGGGCTGGGGCAGCAGCTTGTTGGAGGCCACACTATCCTCTACG
GGCCCAGGTTATTTGCCGCTCTCGCTCTCCCCGCTAGATCCCCTCAAGCT
CGCTGCGTAGGCTTGATGTGTGGTACCCTACCGTAGCGGCTTGCTCAGAG
CGAGCTTGCCGCCATTGGTACACAGTCTCTCCTCCCGTGCCCGCCATTCT
CTGCGCCCCCTCTGCTACCTCGACGCTGTGAAATCGAACTTGTGGTTTGA
GTTTTTATTGAAAGAGACCCAGCCTAGTGAAGATCTCGCACATTTCCTCG
GAGAAGATGTGCGCCTTTTGTGTGCGTTGTACTGTACATGGACTTTTTTG
CTGTTTCTCCAGTTTCTCCTCTCGCCCGCGGCGACGTAGTCGCGCGCTAG
TCATCATGCTCCTCAGCGACGCACGTTGATCCCCCCCCCCCCCCCATACT
GTGTTGCCCCCGCTCATCGCGGCGCGATCGATACCTGGCTTTACGGCTTG
CCATCCGGGGCTGATGAACCTGTCTCATGGGTTTTGGATTGTTTCTTCAG
CTGGCTTTGAGCATGGATGGCAAGATGGTGGCGACGGCCTCAAGCCGGGG
AACCCTCCTGAGGGTGTTCGACACTGACACTGGCTCGTTGTTGCACGTGA
GTTGCTACTTCTTCTTGTGCGGCTGTTTTCTTCTGTGCGCAGATACCGCC
GTTTTTTGTGTAGATGTGTCTGTGTGTGGATGCTTGTTTTATTCTGCGAT
GACGGGGGTATGACAGTCAGTTTGCAGCCGGACGCGACACAGGAATCGCG
TGTCGATGATGTTTGTTTTGTGCGGATGTGGCTGTCGCGATAGTTGCTAT
TCCTGCCATGGCCGCGGTATAGCCATCAGTCGCAGCCGGACTTCACGTTG
GAAGAGTGATGTGTGTCTTGCCGGCATCAGCTGACCTGATGTGGTGATGG
AATAGGATACGCCACGCTCTGCGGGACAACAAATATAAACGCCTGCCTTC
TTGTACCTCCTACGCGGGCTCCTGCGATGGGAGGGGCGCCCGACGAATCT
GTGCGTTTTCTTCTCTATTAGCATTGGCCGTGCGATGTGATGAGAGAGAA
GCAGAGAACATGTTGGCAGTGTGTTTGTGCAACTGGTGTGCCATAGCGGC
AGTGCCGCGTATCGTGTGTGCTGCGTGGTGCTGTTTGTATGCCAGGCCTT
CGGCTCCTCCTACGCTTACGAACTCTCCCTCCCCCCCCCCCCCCCATGCC
TGGCCCATCGCCCCGCTCCGCTCGCTCCAAAGGAGCTACGGAGAGGCATG
GACCGTGCAGAGGTGAGCTCCATCTGCTTCAACCAGCAGAGCACC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6991:3292..7636+

>mRNA_Ecto-sp13_S_contig6991.18012.1 ID=mRNA_Ecto-sp13_S_contig6991.18012.1|Name=mRNA_Ecto-sp13_S_contig6991.18012.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=723bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6991:3292..7636+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTAGCATGAGCCTCAGCAACAACCAGAAGAACGAACTCCTGTTCGT
GGGCTTCAACCAAGACTACGGGTGTTTCGCCTGCGGCACGGACAACGGCT
TCCGCATCTACAACGTCGACCCGTTCCGAGAGACCTTCCGCAGGGTTTTC
AGCAATGGGGGCATCGGCATCGTCGAGATGTTGTTCCGCTGCAATTTGCT
GGCACTGGTCGGAGGGGGAAGAAACCCACGGTACCCTCCCAACAAGGTCA
TGATCTGGGACGACCATCAGAGCCGCTGCATCGGCGAGCTCAGCTTCCGC
AGCGAGGTCAAGGCCGTCCGCCTTCGCCGCGACCGCGTCGTCGTCGTACT
CGCCCAGCGCATCTACGTCTACCGCTTCTCTGACCTGCACCTGCTCGACC
GCATCAACACCATCCGCAACGACCAGGGGCTGGTCGCCCTCTGCGCCGAC
GCCTCCAACATGGTGCTCGCTTGCCCCGGGGTCAGCCGCGGCCACGTTAA
CGTGGAGCTCTACGATCTGAGGCGGTCCACGCTGATCCCGGCCCACGAAT
CGGAGCTTGCCCAGCTGGCTTTGAGCATGGATGGCAAGATGGTGGCGACG
GCCTCAAGCCGGGGAACCCTCCTGAGGGTGTTCGACACTGACACTGGCTC
GTTGTTGCACGAGCTACGGAGAGGCATGGACCGTGCAGAGGTGAGCTCCA
TCTGCTTCAACCAGCAGAGCACC
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