mRNA_Ecto-sp13_S_contig6991.18011.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6991.18011.1 vs. uniprot
Match: A0A6H5L6F7_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6F7_9PHAE) HSP 1 Score: 277 bits (709), Expect = 1.930e-84 Identity = 139/146 (95.21%), Postives = 140/146 (95.89%), Query Frame = 1
Query: 16 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQVRTFYLVYG 453
MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQ + V G
Sbjct: 1 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQATNDHYVIG 146
BLAST of mRNA_Ecto-sp13_S_contig6991.18011.1 vs. uniprot
Match: A0A2D4BKK5_PYTIN (Exportin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKK5_PYTIN) HSP 1 Score: 196 bits (499), Expect = 2.680e-55 Identity = 91/151 (60.26%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 1 PPPLKMDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQVRTFYLVYG 453
P P MDAAQL +E LC LY S E+ R+HAQ +L LQ+SAE IPQCQY+LD+S + YALL+ASSSLT+LI++HWNNFTTPQR++IRNY+L YL GP L +V TSL+Q+LCR+TK GWFDD++HRE+VD V +FLQ + + G
Sbjct: 921 PTPRSMDAAQLQTLETLCSALYESVHESERAHAQQAVLVLQSSAEYIPQCQYVLDNSTSPYALLVASSSLTKLITTHWNNFTTPQRIDIRNYVLAYLAQKGPTLQKFVTTSLVQMLCRLTKFGWFDDEQHREIVDEVTKFLQATVDHCIIG 1071
BLAST of mRNA_Ecto-sp13_S_contig6991.18011.1 vs. uniprot
Match: A0A7S1USY4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USY4_9STRA) HSP 1 Score: 179 bits (454), Expect = 3.830e-55 Identity = 92/144 (63.89%), Postives = 113/144 (78.47%), Query Frame = 1
Query: 16 MDAAQLVQVEALCETLYN---STDE----AARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQ 426
MDA+QL QVEALCETLY+ ST E +R+ AQ +LLSLQ+SAE IPQCQYILD S + YA L+AS+SLT LI+S+WN+FT QR++IRNY+L YL + GPGL D+V SLI+L+CRITKLGWFDD HRE+ D V +FLQ
Sbjct: 1 MDASQLAQVEALCETLYSGAPSTSEDGKPISRADAQARLLSLQSSAEYIPQCQYILDQSNSQYARLVASNSLTELITSYWNSFTVAQRIDIRNYVLGYLANRGPGLQDFVVVSLIKLVCRITKLGWFDDPTHRELADDVTKFLQ 144
BLAST of mRNA_Ecto-sp13_S_contig6991.18011.1 vs. uniprot
Match: A0A835YUW2_9STRA (RAN binding protein 16-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW2_9STRA) HSP 1 Score: 195 bits (496), Expect = 6.230e-55 Identity = 91/138 (65.94%), Postives = 115/138 (83.33%), Query Frame = 1
Query: 10 LKMDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFL 423
+ MDA QL QVE+LC+ LYN+ +EA R+ AQ QL+SLQ+S + IPQCQYILD+S+N YA LLAS+SLT+LI+ HWN+F+ PQRV+IRNYIL+YL S GP L DYV T+L+QLLCRITKLGWFDD HR++VD ++FL
Sbjct: 1 MAMDAQQLAQVESLCDALYNAANEAQRASAQQQLMSLQSSVDYIPQCQYILDNSQNPYARLLASNSLTQLITQHWNSFSVPQRVDIRNYILSYLASQGPSLKDYVVTALVQLLCRITKLGWFDDAAHRDLVDETLKFL 138
BLAST of mRNA_Ecto-sp13_S_contig6991.18011.1 vs. uniprot
Match: A0A8K1CLU5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLU5_PYTOL) HSP 1 Score: 191 bits (486), Expect = 1.380e-53 Identity = 87/146 (59.59%), Postives = 113/146 (77.40%), Query Frame = 1
Query: 16 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQVRTFYLVYG 453
MDA+QL +E LC+ +Y S +E+ R+HAQ +L LQ+SAE IPQCQY+LDHS + YALL+AS+SLT+LI++HWNNFT PQRV+IRNY+L YL GP L YV TSLIQ++CR+TK GWFDD+ HRE+V V +FLQ + + G
Sbjct: 1 MDASQLQNLEVLCKAIYESVNESERTHAQQSVLILQSSAEYIPQCQYVLDHSASPYALLVASTSLTKLITTHWNNFTAPQRVDIRNYVLGYLAEKGPKLEKYVTTSLIQMVCRLTKFGWFDDEHHREIVSEVTKFLQATVDHCLIG 146
BLAST of mRNA_Ecto-sp13_S_contig6991.18011.1 vs. uniprot
Match: D0P208_PHYIT (Exportin-like protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P208_PHYIT) HSP 1 Score: 189 bits (480), Expect = 1.520e-53 Identity = 89/146 (60.96%), Postives = 113/146 (77.40%), Query Frame = 1
Query: 16 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQVRTFYLVYG 453
MDA QL ++E LC LY S +E R+HAQ +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI+SHWNNFTTPQRV+IRNY+L YL GP L +V TSLIQ++CR+TK GWFDD++HRE+V V +FLQ + V G
Sbjct: 1 MDANQLRELETLCRVLYESGNEVERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASTSLTKLITSHWNNFTTPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVAEVTKFLQATVDHCVIG 146
BLAST of mRNA_Ecto-sp13_S_contig6991.18011.1 vs. uniprot
Match: H3GGA7_PHYRM (Importin N-terminal domain-containing protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3GGA7_PHYRM) HSP 1 Score: 189 bits (481), Expect = 6.580e-53 Identity = 89/146 (60.96%), Postives = 114/146 (78.08%), Query Frame = 1
Query: 16 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQVRTFYLVYG 453
MDA QL ++E LC LY S +E+ R+HAQ +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI+SHWNNFTTPQRV+IRNY+L YL GP L +V TSLIQ++CR+TK GWFDD++HRE+V V +FLQ + V G
Sbjct: 1 MDANQLRELETLCRVLYESGNESERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASTSLTKLITSHWNNFTTPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVAEVTKFLQATVDHCVIG 146
BLAST of mRNA_Ecto-sp13_S_contig6991.18011.1 vs. uniprot
Match: A0A662YJ06_9STRA (Importin N-terminal domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJ06_9STRA) HSP 1 Score: 189 bits (481), Expect = 6.600e-53 Identity = 91/150 (60.67%), Postives = 116/150 (77.33%), Query Frame = 1
Query: 16 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIR----NYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQVRTFYLVYG 453
MDA QL Q+E LC+ LY ST+E+ R+HAQ +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI+SHWNNFTTPQRV+IR NY+L YL GP L +V TSLIQ++CR+TK GWFDD++HRE+V V +FLQ + V G
Sbjct: 1 MDAGQLQQLETLCKVLYESTNESERAHAQQAVLILQSSAEYIPQCQYVLDNSTSPYALLVASTSLTKLITSHWNNFTTPQRVDIRTSIGNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVSEVTKFLQATVDHCVIG 150
BLAST of mRNA_Ecto-sp13_S_contig6991.18011.1 vs. uniprot
Match: A0A484EDS8_BRELC (Importin N-terminal domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDS8_BRELC) HSP 1 Score: 188 bits (478), Expect = 1.670e-52 Identity = 88/146 (60.27%), Postives = 113/146 (77.40%), Query Frame = 1
Query: 16 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQVRTFYLVYG 453
MDA QL ++E LC LY ST+E R+HAQ +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI++HWNNFT PQRV+IRNY+L YL GP L +V TSLIQ++CR+TK GWFDD++HRE+V V +FLQ + V G
Sbjct: 1 MDANQLRELETLCRVLYESTNEVERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASNSLTKLITTHWNNFTPPQRVDIRNYVLGYLAQHGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVTEVTKFLQATVDHCVIG 146
BLAST of mRNA_Ecto-sp13_S_contig6991.18011.1 vs. uniprot
Match: A0A5D6XJM5_9STRA (Importin N-terminal domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJM5_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.090e-51 Identity = 87/146 (59.59%), Postives = 111/146 (76.03%), Query Frame = 1
Query: 16 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQVRTFYLVYG 453
MDA QL +E LC+ LY S EA R+ AQ +L LQ+SAE IPQCQY+LDHS + YALL+AS+SLT+LI++HWNNFT PQRV+IRNY+L YL GP L +V TSLIQ++CR+TK GWFDD++HRE+V V +FLQ + + G
Sbjct: 1 MDATQLRNLETLCKVLYESAVEAERARAQQSVLVLQSSAEYIPQCQYVLDHSASPYALLVASNSLTKLITTHWNNFTPPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKFGWFDDEQHREIVGEVTKFLQATVDHCLIG 146 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6991.18011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6991.18011.1 >prot_Ecto-sp13_S_contig6991.18011.1 ID=prot_Ecto-sp13_S_contig6991.18011.1|Name=mRNA_Ecto-sp13_S_contig6991.18011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=150bp MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDback to top mRNA from alignment at Ecto-sp13_S_contig6991:920..1384- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6991.18011.1 ID=mRNA_Ecto-sp13_S_contig6991.18011.1|Name=mRNA_Ecto-sp13_S_contig6991.18011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=465bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6991:920..1384- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6991:920..1384- >mRNA_Ecto-sp13_S_contig6991.18011.1 ID=mRNA_Ecto-sp13_S_contig6991.18011.1|Name=mRNA_Ecto-sp13_S_contig6991.18011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=450bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6991:920..1384- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |