prot_Ecto-sp13_S_contig699.18009.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig699.18009.1
Unique Nameprot_Ecto-sp13_S_contig699.18009.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
BLAST of mRNA_Ecto-sp13_S_contig699.18009.1 vs. uniprot
Match: A0A6H5KBQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBQ3_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.850e-34
Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 0
Query:    1 MSSMDRAALIALFRSTDGANWNRKSNWNTDAGLATWEGIHLNHAGRVVGLFLRDNNLHGSIPGELGGLGKVQLLRLDGNQLSG 83
            MSSMDRAALIALF STDGANW RK NWNTDAGLATWEG+ LNHAGRVV L L +NNLHGSI   LG L ++Q+L +  N+L+G
Sbjct:   19 MSSMDRAALIALFHSTDGANWKRKRNWNTDAGLATWEGVRLNHAGRVVELALPNNNLHGSISEALGALSELQVLSISNNKLTG 101          
BLAST of mRNA_Ecto-sp13_S_contig699.18009.1 vs. uniprot
Match: A0A6H5KMQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ1_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 5.580e-33
Identity = 58/76 (76.32%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 MSSMDRAALIALFRSTDGANWNRKSNWNTDAGLATWEGIHLNHAGRVVGLFLRDNNLHGSIPGELGGLGKVQLLRL 76
            MSSMDRAALIALF STDGANW RKSNWNTDAGLA+WEG+ LNHAGRVVGL L +NNLHGSIP  LG L +++ L +
Sbjct:   46 MSSMDRAALIALFHSTDGANWKRKSNWNTDAGLASWEGVRLNHAGRVVGLSLPNNNLHGSIPEALGALSELKTLAM 121          
BLAST of mRNA_Ecto-sp13_S_contig699.18009.1 vs. uniprot
Match: A0A6H5KKN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN5_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.120e-32
Identity = 55/77 (71.43%), Postives = 65/77 (84.42%), Query Frame = 0
Query:    7 AALIALFRSTDGANWNRKSNWNTDAGLATWEGIHLNHAGRVVGLFLRDNNLHGSIPGELGGLGKVQLLRLDGNQLSG 83
            AALIALF STDG+NW RKSNWNTDAGLATWEG+ LNHAGRVVGLFL +NNLHGSIP  LG L +++ + +  N+L+G
Sbjct:   69 AALIALFHSTDGSNWKRKSNWNTDAGLATWEGVELNHAGRVVGLFLPNNNLHGSIPEALGALSELEKINMSNNKLTG 145          
BLAST of mRNA_Ecto-sp13_S_contig699.18009.1 vs. uniprot
Match: A0A6H5KJF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF4_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 6.870e-31
Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 0
Query:    1 MSSMDRAALIALFRSTDGANWNRKSNWNTDAGLATWEGIHLNHAGRVVGLFLRDNNLHGSIPGELGGLGKVQLL 74
            MSSMDRAALIALF STDGANW RK NWNT+AGLATWEG+ LNHAGRVV L L +NNLHGSIP  LG L +++ L
Sbjct:    1 MSSMDRAALIALFHSTDGANWKRKRNWNTEAGLATWEGVRLNHAGRVVELALPNNNLHGSIPEALGALSELKNL 74          
BLAST of mRNA_Ecto-sp13_S_contig699.18009.1 vs. uniprot
Match: A0A6H5JA93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA93_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 2.010e-30
Identity = 55/77 (71.43%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    7 AALIALFRSTDGANWNRKSNWNTDAGLATWEGIHLNHAGRVVGLFLRDNNLHGSIPGELGGLGKVQLLRLDGNQLSG 83
            AALIALF STDGANW RK NWNTDAGLATWEG+ LNHAGRVV L L +NNLHGSIP  LG L ++++L L  N+L+G
Sbjct:   55 AALIALFHSTDGANWKRKRNWNTDAGLATWEGVRLNHAGRVVELALPNNNLHGSIPEALGALSELKVLYLHDNKLTG 131          
BLAST of mRNA_Ecto-sp13_S_contig699.18009.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 7.660e-28
Identity = 54/74 (72.97%), Postives = 62/74 (83.78%), Query Frame = 0
Query:    1 MSSMDRAALIALFRSTDGANWNRKSNWNTDAGLATWEGIHLNHAGRVVGLFLRDNNLHGSIPGELGGLGKVQLL 74
            +SSMDRAAL+ALFRSTDGANW   SNWNTDAGLATWEG+ +NHAGRVVGL L +NNLHG IP  LG L +++ L
Sbjct:   39 VSSMDRAALVALFRSTDGANWKTNSNWNTDAGLATWEGVKVNHAGRVVGLSLPNNNLHGPIPEALGALSELKKL 112          
BLAST of mRNA_Ecto-sp13_S_contig699.18009.1 vs. uniprot
Match: A0A6H5K1I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I9_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.430e-27
Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 MSSMDRAALIALFRSTDGANWNRKSNWNTDAGLATWEGIHLNHAGRVVGLFLRDNNLHG 59
            MSS+DRAALIALFRSTDGANW  KSNWNTDAGLATWEG+ LNHAGRVV L L +NNLHG
Sbjct:   43 MSSIDRAALIALFRSTDGANWKWKSNWNTDAGLATWEGVSLNHAGRVVELSLPNNNLHG 101          
BLAST of mRNA_Ecto-sp13_S_contig699.18009.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 3.610e-27
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    1 MSSMDRAALIALFRSTDGANWNRKSNWNTDAGLATWEGIHLNHAGRVVGLFLRDNNLHGSIPGELGGLGKVQ 72
            +SS+DRAAL+ALFRSTDGANW   SNWNTDAGLATW+G+ +NHAGRVVGL L DNNL G IP  LG LG+++
Sbjct:   19 VSSIDRAALVALFRSTDGANWKTNSNWNTDAGLATWKGVKVNHAGRVVGLILPDNNLRGPIPEALGALGELK 90          
BLAST of mRNA_Ecto-sp13_S_contig699.18009.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 6.720e-27
Identity = 51/71 (71.83%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    4 MDRAALIALFRSTDGANWNRKSNWNTDAGLATWEGIHLNHAGRVVGLFLRDNNLHGSIPGELGGLGKVQLL 74
            MDRAAL+ALFRSTDGANW+  SNWNTDAG+ATW+G+ +NHAGRVVGLFL DN+LHG IP  LG L +++ L
Sbjct:    1 MDRAALVALFRSTDGANWSTNSNWNTDAGVATWKGVKVNHAGRVVGLFLPDNDLHGPIPEALGALSELKKL 71          
BLAST of mRNA_Ecto-sp13_S_contig699.18009.1 vs. uniprot
Match: A0A6H5K9E9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E9_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.120e-26
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 MSSMDRAALIALFRSTDGANWNRKSNWNTDAGLATWEGIHLNHAGRVVGLFLRDNNLHG 59
            MSSMDRAALIAL+RSTDGANW RK NWNT+AGLATW+G+ LNHAGRVV L L +NNLHG
Sbjct:   64 MSSMDRAALIALYRSTDGANWKRKRNWNTEAGLATWQGVRLNHAGRVVELALPNNNLHG 122          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig699.18009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBQ3_9PHAE1.850e-3472.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMQ1_9PHAE5.580e-3376.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKN5_9PHAE1.120e-3271.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJF4_9PHAE6.870e-3175.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA93_9PHAE2.010e-3071.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUA0_ECTSI7.660e-2872.97Leucine Rich Repeat Protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5K1I9_9PHAE2.430e-2784.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUA2_ECTSI3.610e-2772.22Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
D7FUA1_ECTSI6.720e-2771.83Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
A0A6H5K9E9_9PHAE1.120e-2681.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..83
e-value: 3.1E-22
score: 80.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..83
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 5..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig699contigEcto-sp13_S_contig699:20014..20785 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig699.18009.1mRNA_Ecto-sp13_S_contig699.18009.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig699 15478..20785 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig699.18009.1 ID=prot_Ecto-sp13_S_contig699.18009.1|Name=mRNA_Ecto-sp13_S_contig699.18009.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
MSSMDRAALIALFRSTDGANWNRKSNWNTDAGLATWEGIHLNHAGRVVGL
FLRDNNLHGSIPGELGGLGKVQLLRLDGNQLSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf