prot_Ecto-sp13_S_contig699.18008.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig699.18008.1
Unique Nameprot_Ecto-sp13_S_contig699.18008.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length86
Homology
BLAST of mRNA_Ecto-sp13_S_contig699.18008.1 vs. uniprot
Match: A0A6H5K7G3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7G3_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 8.150e-44
Identity = 80/85 (94.12%), Postives = 84/85 (98.82%), Query Frame = 0
Query:    1 APAAGNDVVTLGQLAEAVELLKEVHSQYDELHREHDAKLGRFQRAVDRITRKLAAVSDDLVPQDELREILALHDELLRERSADNK 85
            APAAGNDVVTLGQLAEAVE LKEVHS+YDELHREHDAKLGRFQRAVDRITRKLAAVS+DLVPQDELRE+LALHDELLRERSADN+
Sbjct:  194 APAAGNDVVTLGQLAEAVEPLKEVHSKYDELHREHDAKLGRFQRAVDRITRKLAAVSNDLVPQDELREMLALHDELLRERSADNR 278          
BLAST of mRNA_Ecto-sp13_S_contig699.18008.1 vs. uniprot
Match: A0A6H5KC16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC16_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.250e-42
Identity = 80/85 (94.12%), Postives = 83/85 (97.65%), Query Frame = 0
Query:    1 APAAGNDVVTLGQLAEAVELLKEVHSQYDELHREHDAKLGRFQRAVDRITRKLAAVSDDLVPQDELREILALHDELLRERSADNK 85
            APAA NDVVTLGQLAEAVELLK+ HSQY+ELHREHDAKLGRFQRAVDRITRKLAAVSDDLVPQDELREILALHDELLRERSADN+
Sbjct:  308 APAADNDVVTLGQLAEAVELLKDEHSQYNELHREHDAKLGRFQRAVDRITRKLAAVSDDLVPQDELREILALHDELLRERSADNR 392          
BLAST of mRNA_Ecto-sp13_S_contig699.18008.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 5.480e-37
Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0
Query:    1 APAAGNDVVTLGQLAEAVELLKEVHSQYDELHREHDAKLGRFQRAVDRITRKLAAVSDDLVPQDELREILALHDELLRERSADNK 85
            APAAGNDVVTLGQLAEAVELLKEVHS+ DELHREHDAKL RFQ AVDRITRKLAAVS+DLVPQ+ELREILALHDELLRERSA N+
Sbjct:  877 APAAGNDVVTLGQLAEAVELLKEVHSKNDELHREHDAKLTRFQGAVDRITRKLAAVSNDLVPQNELREILALHDELLRERSAINR 961          
BLAST of mRNA_Ecto-sp13_S_contig699.18008.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 3.540e-36
Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 0
Query:    1 APAAGNDVVTLGQLAEAVELLKEVHSQYDELHREHDAKLGRFQRAVDRITRKLAAVSDDLVPQDELREILALHDELLRERSADNK 85
            APAAGNDVVTLGQL EAVELLKEVHS+YDELHREHDAKL RFQRAVDRITRK    S+DLVPQ+ELREILALHDELLRERSA N+
Sbjct:  900 APAAGNDVVTLGQLTEAVELLKEVHSKYDELHREHDAKLSRFQRAVDRITRKCTLESNDLVPQNELREILALHDELLRERSAINR 984          
BLAST of mRNA_Ecto-sp13_S_contig699.18008.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 5.760e-30
Identity = 67/85 (78.82%), Postives = 72/85 (84.71%), Query Frame = 0
Query:    1 APAAGNDVVTLGQLAEAVELLKEVHSQYDELHREHDAKLGRFQRAVDRITRKLAAVSDDLVPQDELREILALHDELLRERSADNK 85
            APAAGNDVVTLGQLAEAVELLKEV S++DELHREHDA L R QRAV +ITRK   +SD LVPQDELRE LALHDELLRE  A N+
Sbjct: 1109 APAAGNDVVTLGQLAEAVELLKEVLSKHDELHREHDATLSRVQRAVCKITRKSETMSDGLVPQDELRETLALHDELLRELGAKNR 1193          
BLAST of mRNA_Ecto-sp13_S_contig699.18008.1 vs. uniprot
Match: A0A6H5JHX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX7_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.110e-20
Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    1 APAAGNDVVTLGQLAEAVELLKEVHSQYDELHREHDAKLGRFQRAVDRITRKLAAVS 57
            APAA NDVVTLGQ+AEAVELLKEVH +YDELHREHDAKL RFQR +D+I RK  + S
Sbjct:   15 APAASNDVVTLGQVAEAVELLKEVHCKYDELHREHDAKLSRFQRTIDKIGRKCTSES 71          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig699.18008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K7G3_9PHAE8.150e-4494.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC16_9PHAE2.250e-4294.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUA2_ECTSI5.480e-3790.59Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
D7FUA1_ECTSI3.540e-3687.06Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
D7FUA0_ECTSI5.760e-3078.82Leucine Rich Repeat Protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5JHX7_9PHAE1.110e-2077.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 14..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig699contigEcto-sp13_S_contig699:11811..12766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig699.18008.1mRNA_Ecto-sp13_S_contig699.18008.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig699 11811..12766 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig699.18008.1 ID=prot_Ecto-sp13_S_contig699.18008.1|Name=mRNA_Ecto-sp13_S_contig699.18008.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
APAAGNDVVTLGQLAEAVELLKEVHSQYDELHREHDAKLGRFQRAVDRIT
RKLAAVSDDLVPQDELREILALHDELLRERSADNK*
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