prot_Ecto-sp13_S_contig6989.18006.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6989.18006.1
Unique Nameprot_Ecto-sp13_S_contig6989.18006.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length241
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6989.18006.1 vs. uniprot
Match: A0A6H5K7R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R3_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 1.060e-101
Identity = 199/241 (82.57%), Postives = 205/241 (85.06%), Query Frame = 0 
Query:    1 ASERIWRASLSGNHNINNNSYHEHGRRNGGGRAKAKDASKAGVVPGGVRDDVSSTKGMGLLKSEGHRRHQQRQAPQCLPSGARPMATPSTTSRSAGVDEHDKADPSRVATGDRTAARATTSTPALFSVPPSPVPSSSPAAANNALSSEHPPCNKLPPEVLASMLLSDPEDDIVGKEIVPAASALAERTRQWELQQQRDRQXXXXXXXXXXXLRNQAHVLLQPFPDLPYGFTDLGRRVNVDD 241
            ASERIWRASLSGNH+INN SYHEHGRRNGGGRAKA D SKAGVVPGGVRD V STKGM LLKSEGHR   QRQAP  LPSG RPMATP+TTS SAGVDEH+ AD S VATG +TAAR TTSTPALFSVPPSP  SS PAAA  A SSEHP CNKLPPEVLASMLLS  ++DI GKEIV AA ALAERTRQWELQQ      XXXXXXXXXXLRNQAHVLLQPFPDLPYGFTDLGRRVNVDD
Sbjct:  422 ASERIWRASLSGNHDINN-SYHEHGRRNGGGRAKATDTSKAGVVPGGVRDGVPSTKGMDLLKSEGHR---QRQAPPRLPSGTRPMATPNTTSLSAGVDEHNNADASGVATGGQTAARTTTSTPALFSVPPSPAASSCPAAAV-ASSSEHPRCNKLPPEVLASMLLSVHDEDIGGKEIVHAAGALAERTRQWELQQ------XXXXXXXXXXLRNQAHVLLQPFPDLPYGFTDLGRRVNVDD 651
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6989.18006.1 vs. uniprot
Match: D7FHP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP8_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 8.840e-29
Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = 0 
Query:    1 ASERIWRASLSGNHNINNNSYHEHGRRNGGGRAKAKDASKAGVVPGGVRDDVSSTKGMGLLKSEGHRRHQQRQAPQCLPSGARPMAT 87
            ASERIWRASLSGNH+INN SYHEHGRRNGGGRA+AKDASKAGVVPGGVRD+V ST GMG L++EGH    QRQAP  LPSG+ P AT
Sbjct:  464 ASERIWRASLSGNHDINN-SYHEHGRRNGGGRAEAKDASKAGVVPGGVRDEVPSTDGMGSLQAEGH---WQRQAPPRLPSGSTPPAT 546
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6989.18006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K7R3_9PHAE1.060e-10182.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHP8_ECTSI8.840e-2979.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6989contigEcto-sp13_S_contig6989:5314..6036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6989.18006.1mRNA_Ecto-sp13_S_contig6989.18006.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6989 5314..6036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6989.18006.1 ID=prot_Ecto-sp13_S_contig6989.18006.1|Name=mRNA_Ecto-sp13_S_contig6989.18006.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=241bp
ASERIWRASLSGNHNINNNSYHEHGRRNGGGRAKAKDASKAGVVPGGVRD
DVSSTKGMGLLKSEGHRRHQQRQAPQCLPSGARPMATPSTTSRSAGVDEH
DKADPSRVATGDRTAARATTSTPALFSVPPSPVPSSSPAAANNALSSEHP
PCNKLPPEVLASMLLSDPEDDIVGKEIVPAASALAERTRQWELQQQRDRQ
LQQQQRRQQQQLRNQAHVLLQPFPDLPYGFTDLGRRVNVDD
back to top