mRNA_Ecto-sp13_S_contig6988.18005.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6988.18005.1 vs. uniprot
Match: D8LAX2_ECTSI (Peptide-methionine (R)-S-oxide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX2_ECTSI) HSP 1 Score: 324 bits (831), Expect = 3.800e-108 Identity = 151/154 (98.05%), Postives = 152/154 (98.70%), Query Frame = 1
Query: 1 MPDKYPAPDSFEVTKTDAEWAAELTPTEYDVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDKVV 462
MPDKYPAPDSFEV KTDAEWAAELTP EY+VIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDKVV
Sbjct: 1 MPDKYPAPDSFEVAKTDAEWAAELTPAEYNVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDKVV 154
BLAST of mRNA_Ecto-sp13_S_contig6988.18005.1 vs. uniprot
Match: A0A0G4FGB5_9ALVE (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FGB5_9ALVE) HSP 1 Score: 229 bits (583), Expect = 7.540e-71 Identity = 106/145 (73.10%), Postives = 121/145 (83.45%), Query Frame = 1
Query: 28 SFEVTKTDAEWAAELTPTEYDVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDKVV 462
+FEV K++AEW +LT EY VIRNKGTER TGEYDKFYP+ +G+F CKAC +PLYSA++KF SGCGWPAFDKCFKG+VVT D + GM R+EI+C KCGGHLGHVFEGERMTSTNERHCVNSVSVKF P+P GLEE KVV
Sbjct: 2 NFEVKKSEAEWKEKLTAAEYQVIRNKGTERPGTGEYDKFYPK--QGYFKCKACDHPLYSAKAKFDSGCGWPAFDKCFKGSVVTERDASMGMVRIEIMCGKCGGHLGHVFEGERMTSTNERHCVNSVSVKFVDEPVPAGLEEAKVV 144
BLAST of mRNA_Ecto-sp13_S_contig6988.18005.1 vs. uniprot
Match: A0A835YX10_9STRA (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX10_9STRA) HSP 1 Score: 225 bits (574), Expect = 2.210e-69 Identity = 103/151 (68.21%), Postives = 121/151 (80.13%), Query Frame = 1
Query: 10 KYPAPDSFEVTKTDAEWAAELTPTEYDVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDKVV 462
K+PAP + V K+ EW ++LTP EY V+ NK TERA +GEYDKFYP+ EG F CKAC NPLYSAE+KF SGCGWPAFDKC+ G+VVT DN++G +RVEI+CAKCGGHLGHVFEGERMT TNERHCVNS SV F KG P+ +EE KV+
Sbjct: 3 KFPAPSQYPVAKSAEEWKSKLTPKEYGVLFNKDTERAGSGEYDKFYPKADEGHFACKACNNPLYSAEAKFNSGCGWPAFDKCYHGSVVTEVDNSWG-RRVEILCAKCGGHLGHVFEGERMTPTNERHCVNSASVTFIKGEAPKDVEESKVL 152
BLAST of mRNA_Ecto-sp13_S_contig6988.18005.1 vs. uniprot
Match: A0A2R5GP06_9STRA (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GP06_9STRA) HSP 1 Score: 223 bits (567), Expect = 4.980e-68 Identity = 98/140 (70.00%), Postives = 113/140 (80.71%), Query Frame = 1
Query: 31 FEVTKTDAEWAAELTPTEYDVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEE 450
FEV K++ EW AEL P EY V+R KGTERA TGEYDKFYP EG+F C+ACKNPLY+A +KF SGCGWPAFDKC K ++V D ++GM+RVEI+CAKCGGHLGHVF GE +T TNERHCVNSVSVKF KGP+P EE
Sbjct: 10 FEVRKSEEEWRAELRPQEYHVLREKGTERAYTGEYDKFYPAADEGYFACRACKNPLYTAAAKFDSGCGWPAFDKCIKDSMVVEVDTSFGMKRVEIMCAKCGGHLGHVFHGEGLTPTNERHCVNSVSVKFMKGPVPSSSEE 149
BLAST of mRNA_Ecto-sp13_S_contig6988.18005.1 vs. uniprot
Match: F2URT4_SALR5 (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2URT4_SALR5) HSP 1 Score: 221 bits (563), Expect = 1.060e-67 Identity = 98/141 (69.50%), Postives = 115/141 (81.56%), Query Frame = 1
Query: 37 VTKTDAEWAAELTPTEYDVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDKV 459
V KTD EW + L+ EY ++R KGTERA +GEYDKFYP+K EG F C+ C NPLYSA +KF SGCGWPAFDKC+KGAV T+ DN++GM+RVEIVC CGGHLGHVFEGERMT TNERHCVNSVS++F KG P G +E+KV
Sbjct: 11 VKKTDQEWKSLLSREEYRILREKGTERAGSGEYDKFYPKKGEGHFACRGCGNPLYSAAAKFNSGCGWPAFDKCYKGAVTTHVDNSFGMRRVEIVCGACGGHLGHVFEGERMTDTNERHCVNSVSIRFVKGVEPSGADEEKV 151
BLAST of mRNA_Ecto-sp13_S_contig6988.18005.1 vs. uniprot
Match: A0A7S2RXD0_9STRA (Peptide-methionine (R)-S-oxide reductase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RXD0_9STRA) HSP 1 Score: 210 bits (534), Expect = 2.510e-63 Identity = 94/146 (64.38%), Postives = 115/146 (78.77%), Query Frame = 1
Query: 25 DSFEVTKTDAEWAAELTPTEYDVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDKVV 462
D F V KT+AEW +L+ EY VIR KGTER TGEYD+ +P+ +G+F C+ACKNPLY+A+SKFK+GCGWPAF+ C K ++VTN DN GMQRVEIVC CGGHLGHVF GER T TNERHCVNS+SVK+ K P+P G +E +V+
Sbjct: 6 DKFGVDKTEAEWKKQLSKEEYAVIRQKGTERPFTGEYDQMFPD--DGYFACRACKNPLYTAKSKFKAGCGWPAFEACIKDSIVTNVDNTNGMQRVEIVCGDCGGHLGHVFHGERATETNERHCVNSISVKYIKEPLPAGKQEVEVL 149
BLAST of mRNA_Ecto-sp13_S_contig6988.18005.1 vs. uniprot
Match: A0A0L0FJ82_9EUKA (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FJ82_9EUKA) HSP 1 Score: 210 bits (535), Expect = 9.680e-63 Identity = 92/144 (63.89%), Postives = 113/144 (78.47%), Query Frame = 1
Query: 28 SFEVTKTDAEWAAELTPTEYDVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDKV 459
SF ++KTDAEW + L+ EYDVIRNKGTE TGEY+K YP+ EG F C+ACKNP+YSA +KF SGCGWPAFDKC++G++ T D G++R+EI+C++CGGHLGHVFEGE+ T TNERHCVNSVS+KF KG E E KV
Sbjct: 64 SFPISKTDAEWKSSLSAQEYDVIRNKGTEAPGTGEYNKLYPKADEGHFACRACKNPIYSATAKFDSGCGWPAFDKCYEGSITTEIDQTMGLKRIEIMCSQCGGHLGHVFEGEKFTDTNERHCVNSVSIKFVKGKPAEEKAEVKV 207
BLAST of mRNA_Ecto-sp13_S_contig6988.18005.1 vs. uniprot
Match: A0A0G4EFY5_VITBC (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFY5_VITBC) HSP 1 Score: 206 bits (524), Expect = 8.410e-62 Identity = 94/142 (66.20%), Postives = 110/142 (77.46%), Query Frame = 1
Query: 31 FEVTKTDAEWAAELTPTEYDVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDK 456
FE+ K EW ELTP +Y +IR KGTER TGEY+KFYP+ EG+F C AC NPLYSA++KF SGCGWPAFDKC+K +V T TD+++GM R+EI+CA CGGHLGHVF GER T TNERHCVNSVSVK+ KG LEE K
Sbjct: 17 FEINKPPEEWKKELTPEQYHIIREKGTERPGTGEYNKFYPD--EGYFACAACGNPLYSAKAKFDSGCGWPAFDKCYKESVYTETDSSFGMIRIEIMCANCGGHLGHVFTGERFTDTNERHCVNSVSVKYVKGAPSPPLEEAK 156
BLAST of mRNA_Ecto-sp13_S_contig6988.18005.1 vs. uniprot
Match: A0A0M0J6J4_9EUKA (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J6J4_9EUKA) HSP 1 Score: 206 bits (525), Expect = 1.070e-61 Identity = 95/145 (65.52%), Postives = 113/145 (77.93%), Query Frame = 1
Query: 28 SFEVTKTDAEWAAELTPTEYDVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDKVV 462
+++VTK+DAEW EL+ E+ ++R KGTER TG+YDKFYP+ EG FVC C PLYSA +KF SGCGWPAFDK +GAVVT TD + GM RVEI+C CGGHLGHVFEGERMT TNERHCVNS+SVK+ P+PEG E KV+
Sbjct: 13 TYKVTKSDAEWQKELSREEFYILREKGTERPRTGQYDKFYPK--EGHFVCAGCGTPLYSAAAKFDSGCGWPAFDKIVEGAVVTQTDRSMGMVRVEIMCGNCGGHLGHVFEGERMTPTNERHCVNSISVKYVDEPLPEGKREAKVL 155
BLAST of mRNA_Ecto-sp13_S_contig6988.18005.1 vs. uniprot
Match: C1EJ82_MICCC (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EJ82_MICCC) HSP 1 Score: 204 bits (520), Expect = 2.110e-61 Identity = 94/140 (67.14%), Postives = 110/140 (78.57%), Query Frame = 1
Query: 37 VTKTDAEWAAELTPTEYDVIRNKGTERATTGEYDKFYPEKHEGFFVCKACKNPLYSAESKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDK 456
V K+DAEWA EL T + V+R KGTE A TGEYDKF+P+ EG FVCK C NPLYSA+SKF SGCGWPAFDKC+KGA++T TD +GM+RVEI+C C GHLGHVFE E T T ERHCVNSVSV +++GP P LEE+K
Sbjct: 5 VEKSDAEWAKELDKTSFQVLRKKGTEPAGTGEYDKFFPK--EGHFVCKGCGNPLYSAQSKFNSGCGWPAFDKCYKGALITETDMTFGMKRVEIMCGACDGHLGHVFENEGFTPTMERHCVNSVSVLYKEGPPPTPLEEEK 142 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6988.18005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6988.18005.1 >prot_Ecto-sp13_S_contig6988.18005.1 ID=prot_Ecto-sp13_S_contig6988.18005.1|Name=mRNA_Ecto-sp13_S_contig6988.18005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=155bp MPDKYPAPDSFEVTKTDAEWAAELTPTEYDVIRNKGTERATTGEYDKFYPback to top mRNA from alignment at Ecto-sp13_S_contig6988:3354..7219- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6988.18005.1 ID=mRNA_Ecto-sp13_S_contig6988.18005.1|Name=mRNA_Ecto-sp13_S_contig6988.18005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3866bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6988:3354..7219- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6988:3354..7219- >mRNA_Ecto-sp13_S_contig6988.18005.1 ID=mRNA_Ecto-sp13_S_contig6988.18005.1|Name=mRNA_Ecto-sp13_S_contig6988.18005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=465bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6988:3354..7219- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |