prot_Ecto-sp13_S_contig12116.1799.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12116.1799.1
Unique Nameprot_Ecto-sp13_S_contig12116.1799.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length99
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12116.1799.1 vs. uniprot
Match: D8LJU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU1_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.190e-30
Identity = 69/75 (92.00%), Postives = 71/75 (94.67%), Query Frame = 0 
Query:   24 MTQRLKLLHEEKTALSSDLRTLSATRSSSSTVRLVAADNAMAAMATSGIVGVFAGVALARFLAARRGRSRLSRRQ 98
            MTQRLKLLHEEKTALSS+LRTLSA  SSSSTVRLVAADNAMAAM TSGI+GVFAG ALARFLAARRGRSRLSRRQ
Sbjct:    1 MTQRLKLLHEEKTALSSELRTLSAKGSSSSTVRLVAADNAMAAMVTSGIIGVFAGGALARFLAARRGRSRLSRRQ 75
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12116.1799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJU1_ECTSI1.190e-3092.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..86
NoneNo IPR availableTMHMMTMhelixcoord: 65..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12116contigEcto-sp13_S_contig12116:1845..3648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12116.1799.1mRNA_Ecto-sp13_S_contig12116.1799.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12116 1845..3648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12116.1799.1 ID=prot_Ecto-sp13_S_contig12116.1799.1|Name=mRNA_Ecto-sp13_S_contig12116.1799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=99bp
MGGEVSATELERKDAEAQGLCHEMTQRLKLLHEEKTALSSDLRTLSATRS
SSSTVRLVAADNAMAAMATSGIVGVFAGVALARFLAARRGRSRLSRRQ*
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