mRNA_Ecto-sp13_S_contig6980.17989.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6980.17989.1
Unique NamemRNA_Ecto-sp13_S_contig6980.17989.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6980.17989.1 vs. uniprot
Match: D7FTS1_ECTSI (Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS1_ECTSI)

HSP 1 Score: 566 bits (1459), Expect = 3.720e-193
Identity = 353/449 (78.62%), Postives = 361/449 (80.40%), Query Frame = 1 
Query:    4 GAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRIKKEGDEFRLRRRSGGQGRRASAGAAG---GVGSPSGAATTGVSPPLSHPGSSHRAERRVPNRRHQGYSREDCGARGVGQGGERPPTSVPTGRRPTTSPLLMRRHSTAYSGG-GGGRGRYATGPLGSGRRNVGGRWDAVEEGLEIRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPEGLQRPRRGSSPSARMHNGGGVSGGGEADVGDLMGSLRLDGVNGAAAGGGSGRGS-TDRAATVGASPARGKLAPLTAPSIRPTTSASVVRNGRRLSAPALQPEEL----AANNAPVATKASPYAGKPVAASGNGGXXXXXRSSVRAAAA-RRVGAPGKASLAWQHPVGRNSSIGRSGRDGQHGNHALGEGSWEANDSPALGVEARETHR 1320
            GAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHR+KKEGDEFRLRRRSGGQ R ASAGA       GS SGAA TGVSPPLSHPGS HRAERR+PNRRHQ YSR D GA GVGQGGERPPTSVPTGRRPTTSPLLMRRHSTAYSGG GGGRGRYATGPLGSGRRNVGGRWDAVEEGLEIRGG XXXXXXXXXXXX                 RR EGLQRPRRGSSPSARMHNGGGVSGGG ADVGDLMGSLRLDGVNGAAA          DRAA VGAS ARGKLAPLTAPS RPTTSAS VRNGRRLSAPAL+PEEL    AA+NAPVAT                 XXXXX          RR  APGKASLAWQHPV RNSSIGR  RDG+HGNHALG GSWEANDSP+LGV++RETHR
Sbjct:  316 GAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRMKKEGDEFRLRRRSGGQDRGASAGAXXXXXSAGSHSGAAATGVSPPLSHPGSGHRAERRLPNRRHQRYSRGDSGASGVGQGGERPPTSVPTGRRPTTSPLLMRRHSTAYSGGRGGGRGRYATGPLGSGRRNVGGRWDAVEEGLEIRGGGXXXXXXXXXXXXVRSINGGNSRGRGRG--RRAEGLQRPRRGSSPSARMHNGGGVSGGGGADVGDLMGSLRLDGVNGAAAXXXXXXXXXADRAAVVGASTARGKLAPLTAPSARPTTSASAVRNGRRLSAPALRPEELTRTGAASNAPVATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAVAPGKASLAWQHPVDRNSSIGRGERDGRHGNHALGGGSWEANDSPSLGVDSRETHR 762
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BLAST of mRNA_Ecto-sp13_S_contig6980.17989.1 vs. uniprot
Match: A0A7S2V6D2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6D2_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.130e-23
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 1 
Query:    1 QGAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRIKKE 192
            +GAIAVHCKAGLGRTGTNI  YMMKHYGYTAAES A CR+CRPG + GPQQQ+L  LE R+ +E
Sbjct:   20 KGAIAVHCKAGLGRTGTNICAYMMKHYGYTAAESTAWCRVCRPGMVNGPQQQYLEHLEVRMLEE 83
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BLAST of mRNA_Ecto-sp13_S_contig6980.17989.1 vs. uniprot
Match: F0Y4C3_AURAN (Protein-tyrosine-phosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4C3_AURAN)

HSP 1 Score: 106 bits (265), Expect = 2.030e-21
Identity = 48/71 (67.61%), Postives = 58/71 (81.69%), Query Frame = 1 
Query:    4 GAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRIKKEGDEFRLRR 216
            GAIAVHCKAGLGRTGTNI  YMMKH+GY+A E +   R+CRPGS++GPQQQF+ D E R+ +EGD FR +R
Sbjct:  266 GAIAVHCKAGLGRTGTNIGAYMMKHWGYSATECMGWMRVCRPGSVIGPQQQFILDAEDRLWREGDIFRRQR 336
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BLAST of mRNA_Ecto-sp13_S_contig6980.17989.1 vs. uniprot
Match: A0A7R9UX96_DIALT (Protein-tyrosine-phosphatase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UX96_DIALT)

HSP 1 Score: 106 bits (265), Expect = 2.890e-21
Identity = 49/74 (66.22%), Postives = 60/74 (81.08%), Query Frame = 1 
Query:    4 GAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRIKKEGDEFRLRRRSG 225
            G  AVHCKAGLGRTGT I LY+MKH+G+TAAE IA  R+CRPGS++GPQQ FLHDLE R+ KEG+ +R +  +G
Sbjct:  281 GGTAVHCKAGLGRTGTLIGLYIMKHWGFTAAEVIAWLRLCRPGSVIGPQQNFLHDLEKRMWKEGETYRRKMGTG 354
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BLAST of mRNA_Ecto-sp13_S_contig6980.17989.1 vs. uniprot
Match: A0A8B9HXZ6_ASTMX (Protein-tyrosine-phosphatase n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9HXZ6_ASTMX)

HSP 1 Score: 104 bits (259), Expect = 1.170e-20
Identity = 48/73 (65.75%), Postives = 59/73 (80.82%), Query Frame = 1 
Query:    1 QGAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRIKKEGDEFRLRRR 219
            +GAIAVHCKAGLGRTGT I  Y+MKHY +TAAE+IA  RICRPGS++GPQQ FL + +H +  EGD FR ++R
Sbjct:  255 EGAIAVHCKAGLGRTGTLIGCYLMKHYRFTAAEAIAWIRICRPGSVIGPQQNFLEEKQHSMWVEGDLFRTKQR 327
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BLAST of mRNA_Ecto-sp13_S_contig6980.17989.1 vs. uniprot
Match: UPI0010A33A73 (dual specificity protein phosphatase CDC14AB-like isoform X3 n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=UPI0010A33A73)

HSP 1 Score: 105 bits (261), Expect = 1.400e-20
Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 1 
Query:    1 QGAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRIKKEGDEFRLRRR 219
            +GA+AVHCKAGLGRTGT IA Y+MKHY +TAAE+IA  RICRPGSI+GPQQ FL + +H +  +GD FR ++R
Sbjct:  271 EGAVAVHCKAGLGRTGTLIACYLMKHYRFTAAEAIAWIRICRPGSIIGPQQNFLEEKQHSLWVQGDMFRSKQR 343
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BLAST of mRNA_Ecto-sp13_S_contig6980.17989.1 vs. uniprot
Match: A0A5J4X5L9_9EUKA (Protein-tyrosine-phosphatase n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4X5L9_9EUKA)

HSP 1 Score: 105 bits (262), Expect = 2.070e-20
Identity = 46/69 (66.67%), Postives = 58/69 (84.06%), Query Frame = 1 
Query:    1 QGAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRIKKEGDEFR 207
            +GA+AVHCKAGLGRTGT I  YMMKHYG+TA E +   RICRPGSI+GPQQ FL D+++R+ K+G++FR
Sbjct:  270 EGALAVHCKAGLGRTGTLIGCYMMKHYGFTATEVMGYVRICRPGSIIGPQQHFLIDIQNRMHKQGEQFR 338
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BLAST of mRNA_Ecto-sp13_S_contig6980.17989.1 vs. uniprot
Match: A0A0S7LK30_9TELE (CC14A (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LK30_9TELE)

HSP 1 Score: 98.2 bits (243), Expect = 2.270e-20
Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 1 
Query:    1 QGAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRIKKEGDEFRLRRR 219
            +GA+AVHCKAGLGRTGT IA Y+MKH+  TAAE+IA  RICRPGSI+GPQQ FL + +H +  +GD  R +++
Sbjct:   41 EGAVAVHCKAGLGRTGTLIACYLMKHFRLTAAEAIAWIRICRPGSIIGPQQNFLEEKQHSLWVQGDVHRSKQK 113
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BLAST of mRNA_Ecto-sp13_S_contig6980.17989.1 vs. uniprot
Match: A0A8B8CGE2_CRAVI (Protein-tyrosine-phosphatase n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8CGE2_CRAVI)

HSP 1 Score: 103 bits (258), Expect = 2.550e-20
Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 1 
Query:    1 QGAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRIKKEGDEFRLR 213
            +GA+AVHCKAGLGRTGT IA YMMKHY +TAAE IA CRICRPGSI+GPQQ FL + +  +  +GD +R R
Sbjct:  271 EGAVAVHCKAGLGRTGTLIACYMMKHYKFTAAECIAWCRICRPGSIIGPQQNFLEEKQSLMWMQGDLYRAR 341
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BLAST of mRNA_Ecto-sp13_S_contig6980.17989.1 vs. uniprot
Match: A0A8C4FSI8_9TELE (Protein-tyrosine-phosphatase n=3 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4FSI8_9TELE)

HSP 1 Score: 105 bits (261), Expect = 2.600e-20
Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 1 
Query:    1 QGAIAVHCKAGLGRTGTNIALYMMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRIKKEGDEFRLRRR 219
            +GA+AVHCKAGLGRTGT IA Y+MKHY +TAAE+IA  RICRPGSI+GPQQ FL + +H +  +GD FR ++R
Sbjct:  286 EGAVAVHCKAGLGRTGTLIACYLMKHYRFTAAEAIAWIRICRPGSIIGPQQNFLEEKQHSLWVQGDMFRSKQR 358
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6980.17989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTS1_ECTSI3.720e-19378.62Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus Ta... [more]
A0A7S2V6D2_9STRA1.130e-2375.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
F0Y4C3_AURAN2.030e-2167.61Protein-tyrosine-phosphatase n=1 Tax=Aureococcus a... [more]
A0A7R9UX96_DIALT2.890e-2166.22Protein-tyrosine-phosphatase n=2 Tax=Diacronema lu... [more]
A0A8B9HXZ6_ASTMX1.170e-2065.75Protein-tyrosine-phosphatase n=1 Tax=Astyanax mexi... [more]
UPI0010A33A731.400e-2065.75dual specificity protein phosphatase CDC14AB-like ... [more]
A0A5J4X5L9_9EUKA2.070e-2066.67Protein-tyrosine-phosphatase n=1 Tax=Streblomastix... [more]
A0A0S7LK30_9TELE2.270e-2061.64CC14A (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]
A0A8B8CGE2_CRAVI2.550e-2067.61Protein-tyrosine-phosphatase n=1 Tax=Crassostrea v... [more]
A0A8C4FSI8_9TELE2.600e-2065.75Protein-tyrosine-phosphatase n=3 Tax=Denticeps clu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6980contigEcto-sp13_S_contig6980:101..1600 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score532.3
Seed ortholog evalue2e-148
Seed eggNOG ortholog2880.D7FTS1
Preferred nameCDC14A
Model size1500
KEGG koko:K06639
KEGG Pathwayko04110,ko04111,ko04113,map04110,map04111,map04113
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000022,GO:0000070,GO:0000075,GO:0000077,GO:0000212,GO:0000226,GO:0000228,GO:0000235,GO:0000278,GO:0000280,GO:0000281,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000793,GO:0000794,GO:0000819,GO:0000910,GO:0000922,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005677,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005816,GO:0005818,GO:0005819,GO:0005826,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0005938,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007050,GO:0007051,GO:0007052,GO:0007059,GO:0007080,GO:0007088,GO:0007093,GO:0007096,GO:0007143,GO:0007154,GO:0007165,GO:0007276,GO:0007292,GO:0007346,GO:0008104,GO:0008138,GO:0008150,GO:0008152,GO:0008283,GO:0009607,GO:0009628,GO:0009719,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010389,GO:0010564,GO:0010604,GO:0010638,GO:0010646,GO:0010647,GO:0010948,GO:0010972,GO:0010973,GO:0015629,GO:0015630,GO:0016043,GO:0016311,GO:0016604,GO:0016787,GO:0016788,GO:0016791,GO:0017053,GO:0019222,GO:0019538,GO:0019953,GO:0022402,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030428,GO:0030496,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030869,GO:0031029,GO:0031031,GO:0031032,GO:0031323,GO:0031325,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031503,GO:0031536,GO:0031566,GO:0031570,GO:0031572,GO:0031974,GO:0031981,GO:0031991,GO:0032153,GO:0032155,GO:0032268,GO:0032270,GO:0032465,GO:0032467,GO:0032501,GO:0032504,GO:0032506,GO:0032879,GO:0032886,GO:0032887,GO:0032888,GO:0032954,GO:0032955,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033206,GO:0033365,GO:0033554,GO:0034501,GO:0034502,GO:0034613,GO:0034629,GO:0035335,GO:0035556,GO:0035853,GO:0036211,GO:0036212,GO:0040038,GO:0042578,GO:0042770,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043954,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044380,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044451,GO:0044452,GO:0044454,GO:0044464,GO:0044703,GO:0044732,GO:0044782,GO:0044837,GO:0044878,GO:0045184,GO:0045595,GO:0045786,GO:0045787,GO:0045840,GO:0045930,GO:0045931,GO:0046578,GO:0046579,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048609,GO:0050000,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051056,GO:0051057,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051225,GO:0051229,GO:0051230,GO:0051231,GO:0051233,GO:0051234,GO:0051246,GO:0051247,GO:0051255,GO:0051256,GO:0051276,GO:0051301,GO:0051302,GO:0051303,GO:0051310,GO:0051321,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0051987,GO:0051988,GO:0060236,GO:0060255,GO:0060271,GO:0060284,GO:0060341,GO:0061640,GO:0062033,GO:0065007,GO:0065009,GO:0070013,GO:0070507,GO:0070727,GO:0070925,GO:0070938,GO:0071214,GO:0071216,GO:0071459,GO:0071470,GO:0071495,GO:0071704,GO:0071840,GO:0071850,GO:0071944,GO:0071988,GO:0071989,GO:0072395,GO:0072396,GO:0072401,GO:0072414,GO:0072417,GO:0072422,GO:0072425,GO:0072476,GO:0072479,GO:0072485,GO:0072594,GO:0072686,GO:0072698,GO:0080090,GO:0090068,GO:0090224,GO:0090235,GO:0090307,GO:0090568,GO:0098687,GO:0098783,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0104004,GO:0110020,GO:0110028,GO:0120031,GO:0120036,GO:0120105,GO:0140013,GO:0140014,GO:0140096,GO:1901564,GO:1901891,GO:1901893,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902406,GO:1902410,GO:1902412,GO:1902423,GO:1902425,GO:1902440,GO:1902531,GO:1902533,GO:1902749,GO:1902750,GO:1902846,GO:1902850,GO:1903008,GO:1903046,GO:1903047,GO:1903320,GO:1903322,GO:1903436,GO:1903438,GO:1903490,GO:1904666,GO:1904668,GO:1904789,GO:1905508,GO:1990023,GO:1990598,GO:1990975,GO:2001252
Exons1
EggNOG free text desc.protein tyrosine/serine/threonine phosphatase activity
EggNOG OGsCOG2453@1,KOG1720@2759
Ec32 ortholog descriptionDual specificity/tyrosine protein phosphatase, N-terminal
Ec32 orthologEc-14_001060.1
EC3.1.3.16,3.1.3.48
Cds size1257
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463956.9605-UTR-Ecto-sp13_S_contig6980:100..1661681463956.9605-UTR-Ecto-sp13_S_contig6980:100..166Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6980 101..166 +
1681463956.9896169-UTR-Ecto-sp13_S_contig6980:1423..16001681463956.9896169-UTR-Ecto-sp13_S_contig6980:1423..1600Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6980 1424..1600 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463956.9757462-CDS-Ecto-sp13_S_contig6980:166..14231681463956.9757462-CDS-Ecto-sp13_S_contig6980:166..1423Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6980 167..1423 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6980.17989.1prot_Ecto-sp13_S_contig6980.17989.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6980 167..1423 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6980.17989.1

>prot_Ecto-sp13_S_contig6980.17989.1 ID=prot_Ecto-sp13_S_contig6980.17989.1|Name=mRNA_Ecto-sp13_S_contig6980.17989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=419bp
MMKHYGYTAAESIALCRICRPGSIVGPQQQFLHDLEHRIKKEGDEFRLRR
RSGGQGRRASAGAAGGVGSPSGAATTGVSPPLSHPGSSHRAERRVPNRRH
QGYSREDCGARGVGQGGERPPTSVPTGRRPTTSPLLMRRHSTAYSGGGGG
RGRYATGPLGSGRRNVGGRWDAVEEGLEIRGGGGGGGGGGGSGGGAGVRS
INGGNNRGRGRGRRPEGLQRPRRGSSPSARMHNGGGVSGGGEADVGDLMG
SLRLDGVNGAAAGGGSGRGSTDRAATVGASPARGKLAPLTAPSIRPTTSA
SVVRNGRRLSAPALQPEELAANNAPVATKASPYAGKPVAASGNGGASSSS
RSSVRAAAARRVGAPGKASLAWQHPVGRNSSIGRSGRDGQHGNHALGEGS
WEANDSPALGVEARETHR*
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mRNA from alignment at Ecto-sp13_S_contig6980:101..1600+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6980.17989.1 ID=mRNA_Ecto-sp13_S_contig6980.17989.1|Name=mRNA_Ecto-sp13_S_contig6980.17989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1500bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6980:101..1600+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGGGCAATCGCCGTCCACTGCAAGGCTGGTCTTGGTAGAACCGGAAC
TAACATCGCCCTGTACATGATGAAGCACTACGGCTACACCGCCGCGGAGT
CCATCGCGCTGTGCCGTATTTGTCGCCCGGGGTCCATCGTCGGGCCTCAA
CAGCAGTTCCTCCACGATCTCGAGCACCGCATCAAGAAGGAGGGAGATGA
ATTCCGCCTTCGACGTCGAAGCGGTGGTCAAGGCCGGCGTGCCAGCGCGG
GAGCGGCCGGCGGCGTCGGCAGCCCCAGCGGTGCCGCAACAACGGGGGTG
TCCCCGCCCCTCTCGCACCCCGGCAGCAGCCACCGTGCCGAGCGCCGAGT
TCCCAACCGGCGGCACCAGGGGTACTCGCGGGAAGACTGCGGCGCGAGGG
GCGTCGGTCAAGGCGGGGAGAGGCCACCAACGTCCGTTCCCACCGGCCGC
AGGCCGACCACGTCCCCGCTGCTCATGCGGCGGCACAGCACGGCGTACAG
CGGCGGCGGCGGCGGTAGGGGTCGATATGCGACGGGTCCCCTGGGATCAG
GCCGGCGGAATGTAGGGGGGCGATGGGACGCGGTGGAGGAAGGGCTGGAG
ATTCGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGCGGAAGCGGCGGCGG
CGCGGGGGTCCGGAGTATCAATGGCGGTAACAATAGGGGAAGGGGTCGTG
GAAGACGACCAGAAGGTCTCCAGCGCCCCCGGAGGGGAAGCTCGCCCTCG
GCTAGAATGCACAACGGGGGGGGGGTGAGCGGGGGCGGGGAGGCAGATGT
CGGAGACTTGATGGGATCCCTTCGGCTTGATGGCGTCAACGGAGCTGCAG
CCGGCGGCGGCAGCGGCAGAGGTAGCACAGATCGGGCGGCGACCGTCGGT
GCTTCTCCCGCTCGAGGGAAACTGGCGCCCCTGACTGCACCGTCTATCAG
GCCCACCACCAGCGCCTCGGTGGTCAGAAATGGGAGGAGGCTTTCAGCCC
CCGCCCTGCAGCCAGAGGAACTGGCTGCCAACAACGCCCCCGTTGCTACT
AAGGCGTCTCCCTATGCTGGCAAGCCGGTGGCAGCGTCGGGCAATGGAGG
GGCGAGTAGCAGCAGCAGGAGTAGCGTCAGAGCAGCGGCAGCCCGGAGAG
TAGGAGCGCCGGGCAAGGCCTCCTTGGCTTGGCAGCACCCCGTCGGCAGG
AACAGCAGCATAGGGAGGAGTGGGAGGGATGGGCAGCACGGGAACCACGC
TCTAGGAGAGGGGTCGTGGGAGGCGAACGACTCTCCTGCGCTTGGCGTGG
AAGCTCGCGAGACACACCGATAGCAGTCGTCCGGCCGGCGTGAGTGCGCT
GATAGATGCCCCGATAGATTAGCACATGAAAACAAGTATCGAGGTTACGT
TACGTCATTGCGCCGCGTCAAGTAGTCTGGGTTAAGGTGGGCTTGTCGTG
GGTACTATTCGGTAGAGAATTGTGAAGCTGCTGATGGAGAATCCTGTTGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6980:101..1600+

>mRNA_Ecto-sp13_S_contig6980.17989.1 ID=mRNA_Ecto-sp13_S_contig6980.17989.1|Name=mRNA_Ecto-sp13_S_contig6980.17989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1257bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6980:101..1600+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGAAGCACTACGGCTACACCGCCGCGGAGTCCATCGCGCTGTGCCG
TATTTGTCGCCCGGGGTCCATCGTCGGGCCTCAACAGCAGTTCCTCCACG
ATCTCGAGCACCGCATCAAGAAGGAGGGAGATGAATTCCGCCTTCGACGT
CGAAGCGGTGGTCAAGGCCGGCGTGCCAGCGCGGGAGCGGCCGGCGGCGT
CGGCAGCCCCAGCGGTGCCGCAACAACGGGGGTGTCCCCGCCCCTCTCGC
ACCCCGGCAGCAGCCACCGTGCCGAGCGCCGAGTTCCCAACCGGCGGCAC
CAGGGGTACTCGCGGGAAGACTGCGGCGCGAGGGGCGTCGGTCAAGGCGG
GGAGAGGCCACCAACGTCCGTTCCCACCGGCCGCAGGCCGACCACGTCCC
CGCTGCTCATGCGGCGGCACAGCACGGCGTACAGCGGCGGCGGCGGCGGT
AGGGGTCGATATGCGACGGGTCCCCTGGGATCAGGCCGGCGGAATGTAGG
GGGGCGATGGGACGCGGTGGAGGAAGGGCTGGAGATTCGCGGCGGCGGCG
GCGGCGGCGGCGGCGGGGGCGGAAGCGGCGGCGGCGCGGGGGTCCGGAGT
ATCAATGGCGGTAACAATAGGGGAAGGGGTCGTGGAAGACGACCAGAAGG
TCTCCAGCGCCCCCGGAGGGGAAGCTCGCCCTCGGCTAGAATGCACAACG
GGGGGGGGGTGAGCGGGGGCGGGGAGGCAGATGTCGGAGACTTGATGGGA
TCCCTTCGGCTTGATGGCGTCAACGGAGCTGCAGCCGGCGGCGGCAGCGG
CAGAGGTAGCACAGATCGGGCGGCGACCGTCGGTGCTTCTCCCGCTCGAG
GGAAACTGGCGCCCCTGACTGCACCGTCTATCAGGCCCACCACCAGCGCC
TCGGTGGTCAGAAATGGGAGGAGGCTTTCAGCCCCCGCCCTGCAGCCAGA
GGAACTGGCTGCCAACAACGCCCCCGTTGCTACTAAGGCGTCTCCCTATG
CTGGCAAGCCGGTGGCAGCGTCGGGCAATGGAGGGGCGAGTAGCAGCAGC
AGGAGTAGCGTCAGAGCAGCGGCAGCCCGGAGAGTAGGAGCGCCGGGCAA
GGCCTCCTTGGCTTGGCAGCACCCCGTCGGCAGGAACAGCAGCATAGGGA
GGAGTGGGAGGGATGGGCAGCACGGGAACCACGCTCTAGGAGAGGGGTCG
TGGGAGGCGAACGACTCTCCTGCGCTTGGCGTGGAAGCTCGCGAGACACA
CCGATAG
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