mRNA_Ecto-sp13_S_contig6979.17987.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6979.17987.1 vs. uniprot
Match: D7G0Y8_ECTSI (Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y8_ECTSI) HSP 1 Score: 288 bits (738), Expect = 4.620e-97 Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 1
Query: 1 GSEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDEVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRLGNELNSFGGVVITAANRSDITEVAHLQGKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKV 453
G+EAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFD+VWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFR GNELN FGGVVITAANRSDITEVAHLQ KVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKK+
Sbjct: 17 GTEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDDVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRQGNELNLFGGVVITAANRSDITEVAHLQDKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKI 167
BLAST of mRNA_Ecto-sp13_S_contig6979.17987.1 vs. uniprot
Match: A0A7S4CND3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CND3_9EUGL) HSP 1 Score: 158 bits (399), Expect = 3.060e-46 Identity = 73/151 (48.34%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 1 GSEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDEVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRLGNELNSFGGVVITAANRSDITEVAHLQGKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKV 453
G+ F++ +EPT++ YLN+TVG+ + F AVP+ F E +D V S ++DF++ NP + SC+ESE+GV+ I+SLRNFR G LN FGG + T +NR+DI + L+ K+VE VS++GLGA Q+QW L+ ++G N + D +V FA+NQKK+
Sbjct: 7 GAADFMKRWEPTYATYLNETVGKAL-NISFEAVPMNFAETFDLVGSKAIDFIYTNPSAFSCVESEYGVAPIVSLRNFRKGFTLNQFGGTIFTRSNRTDINTIHDLRDKIVEAVSITGLGACQMQWRLMIEKGINFLVDPAQVVFAFNQKKI 156
BLAST of mRNA_Ecto-sp13_S_contig6979.17987.1 vs. uniprot
Match: A0A7S0DIN8_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIN8_9EUKA) HSP 1 Score: 163 bits (412), Expect = 1.060e-43 Identity = 79/152 (51.97%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 1 GSEAFLESFEPTFSAYLNQTVGEVY-PGVGFIAVPLAFDEVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRLGNELNSFGGVVITAANRSDITEVAHLQGKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKV 453
G F F PTFS YL +TVG + P + F ++ L F + V ASVDF++ NP + SC+ESEF VSAI++LRNFR GNEL FGG++ T ++ +I +A L+GK+VE VS+SGLGA Q+QW LLQD+G++LM ++VRFA+NQKK+
Sbjct: 48 GPTDFHARFSPTFSTYLTETVGPQFNPPIRFESIALDFSSTFTQVEQASVDFIYTNPSAFSCLESEFDVSAIVTLRNFRQGNELTRFGGIIFTRSDNDEINAIADLEGKIVEAVSISGLGAAQMQWKLLQDKGYSLMTLPKQVRFAFNQKKI 199
BLAST of mRNA_Ecto-sp13_S_contig6979.17987.1 vs. uniprot
Match: A0A7S3YSR5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YSR5_9EUKA) HSP 1 Score: 158 bits (400), Expect = 4.160e-42 Identity = 74/152 (48.68%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 1 GSEAFLESFEPTFSAYLNQTVGEVY-PGVGFIAVPLAFDEVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRLGNELNSFGGVVITAANRSDITEVAHLQGKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKV 453
G+ F + F PTF YLNQ VG ++ P + F ++PL F + V + ++DF++ NP + SC++SEFG SA+L+LRN R G EL FGG++ T AN ++IT+++ L+ K VE VS+SGLGA Q+QW L+ ++G NLM D +VRFA+NQKK+
Sbjct: 55 GAADFEKRFSPTFRDYLNQEVGPLFNPPITFESLPLNFSSTFTRVEAGTIDFVYTNPSAFSCLDSEFGASAVLTLRNLRRGQELTQFGGIIFTRANNTNITQLSDLKDKKVEAVSISGLGAAQMQWRLMTEKGMNLMVDPAQVRFAFNQKKI 206
BLAST of mRNA_Ecto-sp13_S_contig6979.17987.1 vs. uniprot
Match: A0A7S3X170_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X170_9SPIT) HSP 1 Score: 124 bits (311), Expect = 1.290e-32 Identity = 67/151 (44.37%), Postives = 93/151 (61.59%), Query Frame = 1
Query: 1 GSEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDEVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRLGNELNSFGGVVITAANRSDITEVAHLQGKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKV 453
G+ AF SF P FS YL TV G+ F A+PL FD+ + +VS VD+++ NP + C+ EFGV ++ SL N+R GN L+ F GV+ + A+ S+ + V L+ VE VS++GLGA QLQ L QG N+M D + FAYNQ K+
Sbjct: 49 GAAAFSSSFNPVFSEYLT-TVLNASRGLEFEAIPLDFDQTFASVSGVDVDYIYSNPAVSVCLMVEFGVMSVGSLLNYRAGNSLDKFAGVIFSRAD-SNFSTVEDLRQARVEAVSIAGLGAMQLQQAALLQQGINIMTDVHRLEFAYNQGKI 197
BLAST of mRNA_Ecto-sp13_S_contig6979.17987.1 vs. uniprot
Match: A0A813LHZ3_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LHZ3_POLGL) HSP 1 Score: 127 bits (320), Expect = 2.140e-31 Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1
Query: 1 GSEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDEVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRLGNELNSFGGVVITAANRSDITEVAHLQGKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKV 453
G+ AF +SF PTF YL TV G+ F+A+PL FD+ +D V ++ +DF++ NP + +CM EF ++ + S+ NFR GN L+ F GV+ AN S+ L+ V VS+SGLGA QLQ L +QGFN+M D + + F NQ K+
Sbjct: 66 GAAAFNKSFGPTFQTYLT-TVLNASHGLEFVALPLNFDQNFDYVRASELDFIYSNPAAYTCMMVEFKLTTVASMMNFRKGNSLDKFAGVIFARANASEFNNTQDLRNARVSAVSISGLGAMQLQQAELLEQGFNIMTDVKRLTFTGNQNKI 215
BLAST of mRNA_Ecto-sp13_S_contig6979.17987.1 vs. uniprot
Match: A0A7S1T0N3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0N3_9CHLO) HSP 1 Score: 125 bits (314), Expect = 5.300e-31 Identity = 64/151 (42.38%), Postives = 88/151 (58.28%), Query Frame = 1
Query: 1 GSEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDEVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRLGNELNSFGGVVITAANRSDITEVAHLQGKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKV 453
G E + TFS YL T G G F V L FD ++A VD L++NP SC+E +FG + +L NFR G +L+ F G + T ++R DI V L+GK+VE VS+SGLGA QLQW L G + + D ++VRF+YNQ+ +
Sbjct: 45 GEETLFAQWNATFSTYLTATAGAALGGRTFQLVYLDFDTAYEAAQHGCVDILYVNPSMYSCLELQFGAAVFATLINFRRGYDLDRFYGTIFTRSDREDIRTVEDLKGKIVEAVSISGLGACQLQWHELLLNGVDFLIDPKQVRFSYNQELI 195
BLAST of mRNA_Ecto-sp13_S_contig6979.17987.1 vs. uniprot
Match: A0A813FKL4_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FKL4_POLGL) HSP 1 Score: 125 bits (314), Expect = 1.800e-30 Identity = 65/148 (43.92%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 1 GSEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDEVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRLGNELNSFGGVVITAANRSDITEVAHLQGKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQ 444
G E F + F PTF YL TV G+ F+A+PL FD+ +D V ++ +DF++ NP + +CM EF ++ + SL NFR GN L+ F GV+ AN S+ L+ V VS+SGLGA QLQ L QGFN+M DT+ + F NQ
Sbjct: 59 GDEVFNQKFGPTFQTYLT-TVLNASHGLEFVALPLNFDQNFDYVGASELDFIYSNPAAYTCMMVEFDLTTVASLMNFRKGNSLDKFAGVMFALANASEFNNTQDLRNARVSAVSISGLGAMQLQQAELLKQGFNIMTDTKRLTFTGNQ 205
BLAST of mRNA_Ecto-sp13_S_contig6979.17987.1 vs. uniprot
Match: F2UDV5_SALR5 (Guanylate cyclase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UDV5_SALR5) HSP 1 Score: 124 bits (310), Expect = 6.160e-30 Identity = 64/151 (42.38%), Postives = 95/151 (62.91%), Query Frame = 1
Query: 1 GSEAFLESFEPTFSAYLNQTVGEVY-PGVGFIAVPLAFDEVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRLGNELNSFGGVVITAANRSDITEVAHLQGKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKK 450
G + F E F+ FS YL T G + P V F A+P+AF + ++VS +DF + NP SC+ES ++ +L++RNFRLG+EL F GV+ TAA+R DI + ++GK + GVS++ LG FQ+Q+G+L G LM D V F+ N ++
Sbjct: 42 GVDYFEEHFKEGFSTYLTNTAGRTFNPPVTFNAIPVAFSDFVNSVSKGELDFTYCNPTLFSCIESGEEMAPLLTVRNFRLGHELTVFAGVIFTAASRDDINTLEDVRGKRLSGVSMTSLGGFQMQYGMLHVAGIELMTDFAMVAFSSNHRQ 192
BLAST of mRNA_Ecto-sp13_S_contig6979.17987.1 vs. uniprot
Match: A0A812K1T3_9DINO (TtrS protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812K1T3_9DINO) HSP 1 Score: 117 bits (294), Expect = 9.060e-28 Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 1 GSEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDEVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRLGNELNSFGGVVITAANRSDITEVAHLQGKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKV 453
G+ F SF PTF +L + + E + G+ F +VPL F++ ++ VSS VDF++ NP + +CM EF + + SL N+R GN L F GV+IT + S V L+ VE VS+SGLGA QLQ L QG N+M D + FA+NQ K+
Sbjct: 2383 GAAVFESSFGPTFQDFLTRRLNESH-GLEFESVPLDFNQNFEFVSSGGVDFIYSNPAAYTCMAVEFNLQTVASLINYRKGNALGKFAGVIITRQD-SAFQTVDDLRTASVEAVSISGLGAMQLQQAELLSQGLNIMTDIPRLTFAFNQNKI 2531 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6979.17987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6979.17987.1 >prot_Ecto-sp13_S_contig6979.17987.1 ID=prot_Ecto-sp13_S_contig6979.17987.1|Name=mRNA_Ecto-sp13_S_contig6979.17987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=151bp GSEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDEVWDAVSSASVDback to top mRNA from alignment at Ecto-sp13_S_contig6979:1600..2869- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6979.17987.1 ID=mRNA_Ecto-sp13_S_contig6979.17987.1|Name=mRNA_Ecto-sp13_S_contig6979.17987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1270bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6979:1600..2869- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6979:1600..2869- >mRNA_Ecto-sp13_S_contig6979.17987.1 ID=mRNA_Ecto-sp13_S_contig6979.17987.1|Name=mRNA_Ecto-sp13_S_contig6979.17987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=453bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6979:1600..2869- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |