mRNA_Ecto-sp13_S_contig6967.17977.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6967.17977.1 vs. uniprot
Match: A0A6H5KYS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE) HSP 1 Score: 509 bits (1312), Expect = 7.590e-177 Identity = 248/274 (90.51%), Postives = 257/274 (93.80%), Query Frame = 1
Query: 1 DYADQFTSAACLGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIG---------DLSANDGGPHAWDEGWAFYTGSLEGTDLGGSGDGQMIYALAEKRCENFGTCSGDTDGSDATGVSEINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISACDPAVGTTVRDNTELGSASAPMADGYAAIKGQLESVYSCMGITCAQVGGLLDDTGAYYTDFEPCTD 795
DYADQFTSAAC GTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAV DCEIG DLSANDGGPHAWDEGWAFYTGSLEGT +GGSGDGQM+YALAEKRCENFGTC+GD+DGSDATGVS INSELL LWE GKANLLAG+CT+ASAVIDEI+PLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSA+ILPWISACDPAVGT VRDNTELG ASAPMADGYAAIKGQLESVYSCMGITCAQVGGLLDDTGAYYT+FEPCTD
Sbjct: 277 DYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVEDCEIGGGCVKVAEGDLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLDLWEDGKANLLAGQCTQASAVIDEILPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDPAVGTAVRDNTELGGASAPMADGYAAIKGQLESVYSCMGITCAQVGGLLDDTGAYYTNFEPCTD 550
BLAST of mRNA_Ecto-sp13_S_contig6967.17977.1 vs. uniprot
Match: D8LQ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI) HSP 1 Score: 515 bits (1326), Expect = 8.870e-169 Identity = 250/267 (93.63%), Postives = 254/267 (95.13%), Query Frame = 1
Query: 1 DYADQFTSAACLGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGDLSANDGGPHAWDEGWAFYTGSLEGTDLGGSGDGQMIYALAEKRCENFGTCSGDTDGSDATGVSEINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISACDPAVGTTVRDNTELGSASAPMADGYAAIKGQLESVYSCMGITCAQVGGLLDDTGAYYTDFEPCTDGA 801
DYADQ+TSAAC GTG FEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAV DCE GDLSANDGGPHAWDEGWAFY GSLEGTD GGSGDGQMIYALAEKRCENFGTCSGDTDGSDATGVS INSELLTLWE GKANLLA ECTEASAVID+IVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISACD AVGT VRDNTELGSASAPMADGYAAIK QLE+VYSCMGITCAQVGGLLDDTGAYYTDFEPC DG+
Sbjct: 1220 DYADQYTSAACQGTGTFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVVDCENGDLSANDGGPHAWDEGWAFYAGSLEGTDAGGSGDGQMIYALAEKRCENFGTCSGDTDGSDATGVSAINSELLTLWEVGKANLLAEECTEASAVIDQIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISACDAAVGTAVRDNTELGSASAPMADGYAAIKTQLETVYSCMGITCAQVGGLLDDTGAYYTDFEPCDDGS 1486
BLAST of mRNA_Ecto-sp13_S_contig6967.17977.1 vs. uniprot
Match: D8LFX4_ECTSI (Probable high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI) HSP 1 Score: 355 bits (912), Expect = 1.050e-118 Identity = 170/266 (63.91%), Postives = 208/266 (78.20%), Query Frame = 1
Query: 1 DYADQFTSAACLGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGDLSANDGGPHAWDEGWAFYTGSLEGTDLGGSGDGQMIYALAEKRCENFGTCSGDTDGSDATGVSEINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISACDPAVGTTVRDNTELGSASAPMADGYAAIKGQLESVYSCMGITCAQVGGL-LDDTGAYYTDFEPCTD 795
DYADQFTS AC GT F+ A + TR+E C+KGAQYQNVWMYV HEL DA+ DC+IG+L+ANDGGPHAWDEGW FY GSLEGT+ G+GDG M+YALAEKRCENF TC+ D DGSD TG +++NS++L L++ G+ LL G+C A V D+I+ LM VPL+QG+LRY Y ADP G GGDK AAELWAFSA++LP I+ CD V T VR NT++ SA APM++GY +K QLESVYSCMGI+C+QVGGL + ++ YY FEPC D
Sbjct: 113 DYADQFTSGACNGTEQFDDASVETRAEGCVKGAQYQNVWMYVIHELEDAIEDCDIGNLNANDGGPHAWDEGWGFYAGSLEGTE--GTGDGVMLYALAEKRCENFATCTADDDGSDITGTAQVNSDMLELYKEGQVYLLDGDCGAAGDVKDKIIDLMGVPLVQGMLRYFYNADPEAGDGGDKAAAELWAFSAAMLPRINECDEEVATLVRANTDIASADAPMSEGYVFLKEQLESVYSCMGISCSQVGGLVIGESTTYYDGFEPCGD 376
BLAST of mRNA_Ecto-sp13_S_contig6967.17977.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 298 bits (762), Expect = 5.200e-91 Identity = 153/266 (57.52%), Postives = 181/266 (68.05%), Query Frame = 1
Query: 1 DYADQFTSAACLGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGDLSANDGGPHAWDEGWAFYTGSLEGTDLGGSGDGQMIYALAEKRCENFGTCSGDTDGSDATGVSEINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGD-KEAAELWAFSASILPWISACDPAVGTTVRDNTELGSASAPMADGYAAIKGQLESVYSCMGITCAQVGGLL--DDTGAYYTDFEPC 789
DYAD+FTSAAC GTG++E E V R+E C KGAQYQNVWMYV HE+ +AVG C GD A DGGPH WDE WAFY GSLEG GDG+M+YALA+KRC NFGTC G DG TG + IN ++L L AG LL G+C EA + IV LM VPL+Q LRY Y ADPA GD K AELWAF+A+ILP I C V TVR N+++ S AP++ G+ A+K +LES+YSC+G+TC QVGGLL D T Y EPC
Sbjct: 475 DYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDNGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGG-ADG--ITGTAAINDDILELIGAGSGYLLEGKCAEAEEAKESIVQLMTVPLVQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPC 737
BLAST of mRNA_Ecto-sp13_S_contig6967.17977.1 vs. uniprot
Match: A0A7S2V1S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA) HSP 1 Score: 278 bits (711), Expect = 1.000e-85 Identity = 137/266 (51.50%), Postives = 176/266 (66.17%), Query Frame = 1
Query: 4 YADQFTSAACLGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGDLSANDGGPHAWDEGWAFYTGSLEGTDLGGSGDGQMIYALAEKRCENFGTCSGDTDGSDA-TGVSEINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISACDPAVGTTVRDNTELGSASAPMADGYAAIKGQLESVYSCMGITCAQVGGLLDD-TGAYYTDFEPCTD 795
YAD FTSAAC GTG + + R ECC KGA YQNVWMYV HE+ DA+GDC+ DL+ ND G AWDE AFYTGSLEG D G GDG ++Y+LA+KRC NFGTC+GD S++ +G + +N ++ L+ G L G+C E V + IV M +PL+QG LRY Y ADP G+K AELWAFSA++LP I+ CD V + +R+N+ +G PM DGY A+K LE+ YSC+G C+ VGG++D G Y + EPC D
Sbjct: 343 YADSFTSAACQGTGDYANVPDIVRVECCQKGAPYQNVWMYVIHEMEDAIGDCKSSDLTDNDSGVVAWDEAVAFYTGSLEGVD--GKGDGNLLYSLADKRCANFGTCTGDVGSSNSQSGRAAVNERIIDLFRDGSVKLHNGDCGEVEKVKNAIVDQMTIPLVQGTLRYLYKADPKGANEGNKARAELWAFSAAVLPRIAECDSGVASMLRENSYIGKD--PMKDGYVAVKEALETTYSCLGFMCSDVGGIIDGGAGNYISGMEPCED 604
BLAST of mRNA_Ecto-sp13_S_contig6967.17977.1 vs. uniprot
Match: A0A7S1TU13_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU13_9STRA) HSP 1 Score: 266 bits (679), Expect = 7.400e-84 Identity = 136/270 (50.37%), Postives = 172/270 (63.70%), Query Frame = 1
Query: 4 YADQFTSAACLGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGDLSANDGGPHAWDEGWAFYTGSLEGTDLGGSGDGQMIYALAEKRCENFGTCSGDTDGSDATGVSEINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIG--TGGDKEAAELWAFSASILPWISACDPAVGTTVRDNTELGSASAPMADGYAAIKGQLESVYSCMGITCAQVGGLL----DDTGAYYTDFEPCTD 795
YAD AA GTG + GA+ V R E K A Y WMYV HE+ DA+ DC GD+++ND HAWDE W FY+G+LEG+ G+ DG + Y LAEKRC NFGTC+GD DG TG S +N +LL+L++ G L G+C A ++ IV M VPLIQG LRY Y ADP G T K+ AE WAF++++LP I ACD V + +R N E G AS P+ADGYAA+ +++ VYSC+GITCA VGG + D T Y + EPC D
Sbjct: 23 YADDMVVAALDGTGIYAGADDVVREEIASKTAAYSVTWMYVIHEMEDAINDCNEGDITSNDDAVHAWDEAWVFYSGTLEGSSEEGNRDGVLAYRLAEKRCANFGTCNGDDDGDATTGKSLVNDQLLSLYKQGMHALEDGKCNSAEVILRAIVKQMTVPLIQGTLRYAYKADPNGGADTPASKQQAEGWAFTSAVLPQIDACDAGVASMIRANMEYGVAS-PVADGYAAVYAEMQKVYSCLGITCADVGGYVASVTDGTITYVSGTEPCDD 291
BLAST of mRNA_Ecto-sp13_S_contig6967.17977.1 vs. uniprot
Match: A0A7S2XA87_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XA87_9EUKA) HSP 1 Score: 260 bits (665), Expect = 2.290e-81 Identity = 136/266 (51.13%), Postives = 169/266 (63.53%), Query Frame = 1
Query: 1 DYADQFTSAACLGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGDLSANDGGPHAWDEGWAFYTGSLEGTDLGGSGDGQMIYALAEKRCENFGTCSGDTDGSDATGVSEINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTG-GDKEAAELWAFSASILPWISACDPAVGTTVRDNTELGSASAPMADGYAAIKGQLESVYSCMGITCAQVGGLLDDTGAYYTDFEPCTD 795
+YAD FTS ACLG G F G + V + E C KG+ YQNVWMYV E+ DA+ DC GDLS N HAWDE AFY GSLEGTD GSG G + YALAEKR FGT + D G + +N+E++ L++ G++ LLAG+C E V D+IV + VPL+QG LRY L DPA G K AE WAF+ ++LP I+ C+P V +R+N + + PM DGY +K Q ESVYSCMGITC VGGLL+ Y+ EPC D
Sbjct: 107 NYADVFTSDACLGQGQFAGVDQVAKKELCKKGSAYQNVWMYVVWEMQDAIDDCLGGDLSNNGAAVHAWDEAVAFYVGSLEGTD--GSGAGVLGYALAEKRAPQFGTANSD-------GSAIVNAEVMDLFKDGQSKLLAGKCAEVETVRDKIVAQITVPLVQGALRYALLTDPAGPIRQGAKGQAEGWAFAIAVLPQINRCNPTVAAEIRENLQYPNPQGPMVDGYRYVKQQFESVYSCMGITCDSVGGLLNGNEGYFDGMEPCRD 363
BLAST of mRNA_Ecto-sp13_S_contig6967.17977.1 vs. uniprot
Match: A0A7S1IQR3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQR3_9EUGL) HSP 1 Score: 261 bits (666), Expect = 1.570e-78 Identity = 138/264 (52.27%), Postives = 170/264 (64.39%), Query Frame = 1
Query: 4 YADQFTSAACLGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGDLSANDGGPHAWDEGWAFYTGSLEGTDLGGSGDGQMIYALAEKRCENFGTCSGDTDGSDATGVSEINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISACDPAVGTTVRDNTELGSASAPMADGYAAIKGQLESVYSCMGITCAQVGGLLDDTGAYYTDFEPCTD 795
YA+ F AA GTG F G V R E KG Y N WMYV E+ DA+ DC G L+ ND G HAWDE WAFY GSLEG D GSG G YALA+KRC +FGTC+ A+G S IN ++L L++ G A L AG+CT+A +V+ I MAVPL+QG+LRY + ADP G G KE AE WAF+ ILP + C A TTVR+N ++ SAS P++ G+AA+K LESVY C+GITC VGG+L+ +YY EPC D
Sbjct: 438 YANDFVMAALEGTGVFAGKATVARQESVKKGISYGNTWMYVVVEMEDAIQDCTAGLLADNDKGVHAWDEAWAFYAGSLEGAD--GSGSGVQPYALADKRCVDFGTCT-------ASGGSAINRDILALFQDGLALLRAGKCTDARSVMTAITRKMAVPLVQGVLRYAWKADPVNGVSGPKEIAEGWAFTRGILPQVQQCSVAAATTVRNNMDIASAS-PVSGGFAAVKQALESVYPCLGITCGDVGGVLNGA-SYYAGMEPCRD 690
BLAST of mRNA_Ecto-sp13_S_contig6967.17977.1 vs. uniprot
Match: A0A7R9Y8Q2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q2_9STRA) HSP 1 Score: 255 bits (651), Expect = 2.910e-76 Identity = 138/280 (49.29%), Postives = 176/280 (62.86%), Query Frame = 1
Query: 1 DYADQFTSAACLGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGD-LSANDGGPHAWDEGWAFYTGSLEGTDLGGSGDGQMIYALAEKRCENFGTCSGDTDGSDATGVSEINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIG------TGGDKEAAELWAFSASILPWISACDPAVGTTVRDNTEL--GSASAPMADGYAAIKGQLESVYSCMGITCAQVGGLL----DDTGAYYTDFEPCTDGA 801
DYADQF +AA GTG + + + R E KGA YQN WMYV HEL DAV DC+ G ++ D HAWDEGWAFY GSLE G+G G +YALAEKRC NF TC+GD DG +TG S +N+ELL+L++ G+ L AG C A+ V+ EIV M VPLIQG+LRY YLAD +IG + + AE WAF+A+++P + ACD A+ +R N E G+ S P+ DGY + +++ YSC+GITCA VGG L D Y + PC D A
Sbjct: 61 DYADQFVTAALDGTGPYVDSSDLVRDEIASKGAAYQNTWMYVIHELEDAVLDCQAGTPMNNEDPAVHAWDEGWAFYAGSLED----GTGSGVQVYALAEKRCANFFTCTGDDDGDASTGRSAVNAELLSLYQEGQLALNAGNCNGAALVVREIVKQMTVPLIQGVLRYAYLADQSIGGVQATPEEWEDDQAEGWAFTAAVMPQLDACDAALAAEIRANMEFVQGNTS-PVQDGYEVVYAKMQRFYSCLGITCADVGGYLSSVTDGVPTYVSGAGPCVDAA 335
BLAST of mRNA_Ecto-sp13_S_contig6967.17977.1 vs. uniprot
Match: A0A7S1IQD7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQD7_9EUGL) HSP 1 Score: 225 bits (574), Expect = 9.080e-65 Identity = 122/249 (49.00%), Postives = 157/249 (63.05%), Query Frame = 1
Query: 4 YADQFTSAACLGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGDLSANDGGPHAWDEGWAFYTGSLEGTDLGGSGDGQMIYALAEKRCENFGTCSGDTDGSDATGVSEINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTG---GDKEAAELWAFSASILPWISACDPAVGTTVRDNTELGSASAPMADGYAAIKGQLESVYSCMGITCAQVG 741
YAD F AA GTG F G V+R E KG+ Y N WMYV EL DA+ DC+ G L+ ND G HAWDE WAFY GSLEG D GSG G YALA+KRC +F TC+ ++G S +N+ +L L++ G+A L+AG C A A D I M VP++QG+LRY + ADPA G KE AE WAF+ ILP + +C+P T V+ N ++ +A+ PMADGY AI +ES Y+C+GI+ + VG
Sbjct: 102 YADDFVMAALQGTGVFAGKPAVSREESAAKGSAYGNSWMYVQLELEDAIDDCKAGALADNDRGVHAWDEAWAFYAGSLEGVD--GSGSGVQPYALADKRCADFNTCT-------SSGGSAVNAAVLQLFKDGQALLVAGSCDAAQAKADAIARQMLVPMLQGMLRYAWKADPANSEEARRGPKEYAEGWAFARGILPQLDSCNPQGATLVQRNMDIAAAT-PMADGYQAILAVVESAYTCLGISSSHVG 340 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6967.17977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6967.17977.1 >prot_Ecto-sp13_S_contig6967.17977.1 ID=prot_Ecto-sp13_S_contig6967.17977.1|Name=mRNA_Ecto-sp13_S_contig6967.17977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=273bp DYADQFTSAACLGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVback to top mRNA from alignment at Ecto-sp13_S_contig6967:6..1420+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6967.17977.1 ID=mRNA_Ecto-sp13_S_contig6967.17977.1|Name=mRNA_Ecto-sp13_S_contig6967.17977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1415bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6967:6..1420+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6967:6..1420+ >mRNA_Ecto-sp13_S_contig6967.17977.1 ID=mRNA_Ecto-sp13_S_contig6967.17977.1|Name=mRNA_Ecto-sp13_S_contig6967.17977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=819bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6967:6..1420+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |