prot_Ecto-sp13_S_contig6964.17974.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig6964.17974.1
Unique Name	prot_Ecto-sp13_S_contig6964.17974.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	342

Homology

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BLAST of mRNA_Ecto-sp13_S_contig6964.17974.1 vs. uniprot
Match: D7FLK3_ECTSI (AAA ATPase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK3_ECTSI)

HSP 1 Score: 587 bits (1513), Expect = 1.140e-198
Identity = 318/338 (94.08%), Postives = 322/338 (95.27%), Query Frame = 0

Query:    5 ESAAQRFRAAIVRQGSELVFFRVTELRGAGTRDGGGGRSNGVASLGLAAGNDDRGEQEGSSEAEAAGGMVVSQRVTELREGGPICSPVPETLRYQRFVCRANGYPCPEAKPPFDERCVEAVVAALAPVVGPEAFRLLVVSRSRPAVLLHGPGATEGGGSLVEAAAERLGMHVRTVAMRSVLGSAPHAGGAGFAVGGAAGALRQEFQAAMEASPCVLHLRAITSLAAGARQDPGGEEADERFVESLSACLEEIDSAAAAAAATMPGEGRGSWRVQERGRSLPSSSSAAAGTVVLVGSAESLERVPASLRRCFTHEVLAPFPPEKLRLSLLEHHLGGVTT 342
            ES AQRFRAAIVRQGSELVFFRVTELRGAGTR GG GRS+  ASLGLAAGND+R EQEGS EAEAA GMVVSQRVTELREGGPICSPVPETLRYQRFVCRANGYPCPEAKPPFDERCVEAVVAALAPVVGPEAFRLLVV+RSRPAVLLHGPGA EGGGSLVEAAAERLGMHVRTVAMRSVLGSAPHAGGAGFA GGAAGALRQEFQAAMEASPCVLHLR ITSLAAGARQDPGGEEADERFVESLSACLE+IDSAAAAAAATMPGEGRGS RVQERGRSLPSSS  AAG VVLVGSAESLERVP SLRRCFTHEVLAPFPPEKLRLSLLEHHLGGVTT
Sbjct:  338 ESVAQRFRAAIVRQGSELVFFRVTELRGAGTRGGGAGRSSEEASLGLAAGNDERFEQEGSPEAEAAAGMVVSQRVTELREGGPICSPVPETLRYQRFVCRANGYPCPEAKPPFDERCVEAVVAALAPVVGPEAFRLLVVARSRPAVLLHGPGAAEGGGSLVEAAAERLGMHVRTVAMRSVLGSAPHAGGAGFAAGGAAGALRQEFQAAMEASPCVLHLRGITSLAAGARQDPGGEEADERFVESLSACLEKIDSAAAAAAATMPGEGRGSRRVQERGRSLPSSSYVAAGAVVLVGSAESLERVPVSLRRCFTHEVLAPFPPEKLRLSLLEHHLGGVTT 675

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BLAST of mRNA_Ecto-sp13_S_contig6964.17974.1 vs. uniprot
Match: A0A6H5JDF2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDF2_9PHAE)

HSP 1 Score: 553 bits (1425), Expect = 3.900e-187
Identity = 312/387 (80.62%), Postives = 320/387 (82.69%), Query Frame = 0

Query:    5 ESAAQRFRAAIVRQGSELVFFRVTELRGAGTRDGGGGRSNGVASLGLAAGNDDRGEQEGSSEAEAAGGMVVSQRVTELREGGPICSPVPETLRYQRFVCRANGYPCPEAKPPF-------------------------------------------------DERCVEAVVAALAPVVGPEAFRLLVVSRSRPAVLLHGPGATEGGGSLVEAAAERLGMHVRTVAMRSVLGSAPHAGGAGFAVGGAAGALRQEFQAAMEASPCVLHLRAITSLAAGARQDPGGEEADERFVESLSACLEEIDSAAAAAAATMPGEGRGSWRVQERGRSLPSSSSAAAGTVVLVGSAESLERVPASLRRCFTHEVLAPFPPEKLRLSLLEHHLGGVTT 342
            ESAAQRFRAAIVRQGSELVFFRVT LRGAGTR G GGRS+  ASLGLAAGND++ EQEGSSEAEAAGGMVVSQRVTELREGGP+CSPVPE  RYQ+FVCRANG+PCP  KPPF                                                 DERCVEAVVAALAPVVGPEAFRLLVV+RSRPAVLLHGPGA +GGGSLVEAAAERLGMHVRTVAMRSVLGSAPHAGGAGFA GGAAGALRQEFQAAMEA PCVLHLRAITSLAAGARQDPGGEEADERFVESLSACLEEIDSAAAA   TMPGEGRGS RVQERGRSLPSSSS AAGTVVLVGSAESLERVPASLRRCFTHEVLAPFPPEKLRLSLLEHHLGGVTT
Sbjct:  278 ESAAQRFRAAIVRQGSELVFFRVTGLRGAGTRGGDGGRSSEEASLGLAAGNDEKLEQEGSSEAEAAGGMVVSQRVTELREGGPVCSPVPEISRYQQFVCRANGFPCPATKPPFALLRMEMSKISKCNGAVRAYIKQCGWSAVAGRCLHARTGNVARHDNSSTDERCVEAVVAALAPVVGPEAFRLLVVARSRPAVLLHGPGAAQGGGSLVEAAAERLGMHVRTVAMRSVLGSAPHAGGAGFAAGGAAGALRQEFQAAMEAYPCVLHLRAITSLAAGARQDPGGEEADERFVESLSACLEEIDSAAAAXXXTMPGEGRGSGRVQERGRSLPSSSSVAAGTVVLVGSAESLERVPASLRRCFTHEVLAPFPPEKLRLSLLEHHLGGVTT 664

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig6964.17974.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig6964.17974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FLK3_ECTSI	1.140e-198	94.08	AAA ATPase domain-containing protein n=1 Tax=Ectoc...	[more]
A0A6H5JDF2_9PHAE	3.900e-187	80.62	AAA domain-containing protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 118..339 e-value: 4.7E-12 score: 47.7
None	No IPR available	PANTHER	PTHR23077	AAA-FAMILY ATPASE	coord: 87..337
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 145..338

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig6964	contig	Ecto-sp13_S_contig6964:2..6284 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig6964.17974.1	mRNA_Ecto-sp13_S_contig6964.17974.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig6964 2..6284 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig6964.17974.1 ID=prot_Ecto-sp13_S_contig6964.17974.1|Name=mRNA_Ecto-sp13_S_contig6964.17974.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=342bp
RRRRESAAQRFRAAIVRQGSELVFFRVTELRGAGTRDGGGGRSNGVASLG
LAAGNDDRGEQEGSSEAEAAGGMVVSQRVTELREGGPICSPVPETLRYQR
FVCRANGYPCPEAKPPFDERCVEAVVAALAPVVGPEAFRLLVVSRSRPAV
LLHGPGATEGGGSLVEAAAERLGMHVRTVAMRSVLGSAPHAGGAGFAVGG
AAGALRQEFQAAMEASPCVLHLRAITSLAAGARQDPGGEEADERFVESLS
ACLEEIDSAAAAAAATMPGEGRGSWRVQERGRSLPSSSSAAAGTVVLVGS
AESLERVPASLRRCFTHEVLAPFPPEKLRLSLLEHHLGGVTT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase