prot_Ecto-sp13_S_contig69635.17973.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69635.17973.1
Unique Nameprot_Ecto-sp13_S_contig69635.17973.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length72
Homology
BLAST of mRNA_Ecto-sp13_S_contig69635.17973.1 vs. uniprot
Match: D8LIV8_ECTSI (Cir_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIV8_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 5.130e-46
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
Query:    1 GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSVDENPHD 72
            GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSVDENPHD
Sbjct:  153 GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSVDENPHD 224          
BLAST of mRNA_Ecto-sp13_S_contig69635.17973.1 vs. uniprot
Match: A0A5D6XYB1_9STRA (Cir_N domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYB1_9STRA)

HSP 1 Score: 106 bits (264), Expect = 4.340e-25
Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSV-DENPHD 72
            GRR +  +++  Q ERFPFLKDAPVE  Y   VKVNFKP    +R+VRCMRCGEWGH+SGDREC++ D NPHD
Sbjct:  513 GRRPDENLTIKAQVERFPFLKDAPVEGQYTDAVKVNFKPMGKQLRNVRCMRCGEWGHQSGDRECALRDANPHD 585          
BLAST of mRNA_Ecto-sp13_S_contig69635.17973.1 vs. uniprot
Match: A0A8K1C5M5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5M5_PYTOL)

HSP 1 Score: 103 bits (256), Expect = 1.780e-24
Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    1 GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSV-DENPHD 72
            GRR +  +++ EQ ERFPFLKDAPVE  Y + VKVNFKP    +R+VRC+RCG+WGH+SGDREC++ D+NP D
Sbjct:  131 GRRPDEPLTIKEQVERFPFLKDAPVEGNYTSSVKVNFKPMGRQLRNVRCLRCGQWGHQSGDRECAMRDQNPLD 203          
BLAST of mRNA_Ecto-sp13_S_contig69635.17973.1 vs. uniprot
Match: A0A024GR32_9STRA (Cir_N domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GR32_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.780e-24
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    1 GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSVDE-NPHD 72
            GRR +  +++ EQ ERFPFLKDAPVE  Y   VKVNFKP    +R+VRC+RCGEWGH SGDREC +   NPHD
Sbjct:  133 GRRPDESLTIDEQVERFPFLKDAPVEGDYTGNVKVNFKPMGVQLRNVRCLRCGEWGHLSGDRECELRNFNPHD 205          
BLAST of mRNA_Ecto-sp13_S_contig69635.17973.1 vs. uniprot
Match: K3X636_GLOUD (Cir_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X636_GLOUD)

HSP 1 Score: 102 bits (254), Expect = 3.490e-24
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSV-DENPHD 72
            GRR +  +++  Q ERFPFLKDAPVE  Y   VKVNFKP    +R+V+C+RCGEWGH+SGDRECS+ D NPHD
Sbjct:  130 GRRPDENLTIKTQVERFPFLKDAPVEGEYTDSVKVNFKPVGVQLRNVKCIRCGEWGHQSGDRECSLRDFNPHD 202          
BLAST of mRNA_Ecto-sp13_S_contig69635.17973.1 vs. uniprot
Match: A0A1W0A6W9_9STRA (Cir_N domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6W9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 8.470e-24
Identity = 44/71 (61.97%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    1 GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSVDE-NP 70
            GRR N  VS+ EQ ERFP LKDAPVE  Y + +KVNF+P    +R+++C+RCGEWGH+SGDRECS+ E NP
Sbjct:  128 GRRPNEPVSIKEQVERFPMLKDAPVEGEYTSNIKVNFQPVGVKLRNIKCIRCGEWGHQSGDRECSLREFNP 198          
BLAST of mRNA_Ecto-sp13_S_contig69635.17973.1 vs. uniprot
Match: A0A067C9Y7_SAPPC (Cir_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C9Y7_SAPPC)

HSP 1 Score: 99.0 bits (245), Expect = 2.190e-23
Identity = 43/73 (58.90%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSVDE-NPHD 72
            GRR N  +S+ +Q ERFP LKDAPVE  Y + ++VNF+P    +R+V+C+RCGEWGH+SGDRECS+ E NP D
Sbjct:  129 GRRPNEAISIKDQVERFPMLKDAPVEGEYTSNIRVNFQPVGVKLRNVKCIRCGEWGHQSGDRECSLREFNPLD 201          
BLAST of mRNA_Ecto-sp13_S_contig69635.17973.1 vs. uniprot
Match: A0A662Y2V8_9STRA (Cir_N domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y2V8_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.900e-23
Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSV-DENPH 71
            GRR    +++ +Q ERFP LKDAPVE  Y   V+VNFKP    +R+V+C+RCG+WGH+SGDREC + D+NPH
Sbjct:  126 GRRAEDPLTIKDQVERFPILKDAPVEGGYTDSVRVNFKPMGLQLRNVKCIRCGQWGHQSGDRECKLRDQNPH 197          
BLAST of mRNA_Ecto-sp13_S_contig69635.17973.1 vs. uniprot
Match: F0WVY7_9STRA (Protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WVY7_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.380e-23
Identity = 45/73 (61.64%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    1 GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSVDE-NPHD 72
            GRR +  +++ EQ ERFPFLKDAPV+  Y   VKVNFKP    +R+VRC+RCGEWGH SGDREC +   NPHD
Sbjct:  176 GRRPDESLTIDEQVERFPFLKDAPVQGDYTGNVKVNFKPMGVQLRNVRCLRCGEWGHLSGDRECKLRNFNPHD 248          
BLAST of mRNA_Ecto-sp13_S_contig69635.17973.1 vs. uniprot
Match: W2P950_PHYPN (Cir_N domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=W2P950_PHYPN)

HSP 1 Score: 97.1 bits (240), Expect = 4.220e-23
Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    1 GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCMRCGEWGHRSGDRECSV-DENPHD 72
            GRR    +++ +Q ERFP LKDAPVE  Y   +KVNF P    +R+VRC+RCGEWGH+SGDREC + D+NP+D
Sbjct:  125 GRRAEETLTIKDQVERFPILKDAPVEGKYTETIKVNFNPLGLRLRNVRCIRCGEWGHQSGDRECKLRDQNPND 197          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69635.17973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIV8_ECTSI5.130e-46100.00Cir_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A5D6XYB1_9STRA4.340e-2564.38Cir_N domain-containing protein n=1 Tax=Pythium br... [more]
A0A8K1C5M5_PYTOL1.780e-2461.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GR32_9STRA2.780e-2463.01Cir_N domain-containing protein n=1 Tax=Albugo can... [more]
K3X636_GLOUD3.490e-2463.01Cir_N domain-containing protein n=1 Tax=Globispora... [more]
A0A1W0A6W9_9STRA8.470e-2461.97Cir_N domain-containing protein n=1 Tax=Thraustoth... [more]
A0A067C9Y7_SAPPC2.190e-2358.90Cir_N domain-containing protein n=2 Tax=Saprolegni... [more]
A0A662Y2V8_9STRA2.900e-2356.94Cir_N domain-containing protein n=2 Tax=Nothophyto... [more]
F0WVY7_9STRA3.380e-2361.64Protein kinase putative n=1 Tax=Albugo laibachii N... [more]
W2P950_PHYPN4.220e-2357.53Cir_N domain-containing protein n=2 Tax=Phytophtho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040014Corepressor interacting with RBPJ 1PANTHERPTHR13151CBF1 INTERACTING COREPRESSOR CIRcoord: 13..66
NoneNo IPR availablePANTHERPTHR13151:SF2COREPRESSOR INTERACTING WITH RBPJ 1coord: 13..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69635contigEcto-sp13_S_contig69635:1..708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69635.17973.1mRNA_Ecto-sp13_S_contig69635.17973.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69635 1..708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69635.17973.1 ID=prot_Ecto-sp13_S_contig69635.17973.1|Name=mRNA_Ecto-sp13_S_contig69635.17973.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=72bp
GRRVNPGVSLAEQQERFPFLKDAPVEHAYAAGVKVNFKPFNNVIRHVRCM
RCGEWGHRSGDRECSVDENPHD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040014CIR1