prot_Ecto-sp13_S_contig6959.17971.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6959.17971.1
Unique Nameprot_Ecto-sp13_S_contig6959.17971.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length342
Homology
BLAST of mRNA_Ecto-sp13_S_contig6959.17971.1 vs. uniprot
Match: A0A6H5JCH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH5_9PHAE)

HSP 1 Score: 457 bits (1177), Expect = 2.280e-156
Identity = 307/381 (80.58%), Postives = 314/381 (82.41%), Query Frame = 0
Query:    1 SGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQ---------------------------------------VRVTWHLVLDATPMVARPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQAWMQLPSWVTKGRSGGVAGAPGTISVSSSGGVRGGIDDFNRSGRRSGGHFERRMPVDLSGTAMAFQGLAEVRAASLTSRRKGELAAVGFDASSSWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRGDSPNGERSIARSKXXXXX-KGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQRQLTPQ 341
            SGV+LTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQ                                       VRVTWHLVLDATPMVARPVHLDGTSVYGLSTEGLVRRHD+ETIIVNGTPVKPPFAQAWMQLPSWVT+GRSGGVAGAPG  SVSSSGGVRG IDDF+RSGRRSGG FERR+P+DLSGTAMAFQGLAEVRAAS+T RRKG LAAVGFDAS    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 XXXXX KGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQRQLTPQ
Sbjct:  148 SGVILTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQDDEQLLVHPCEMQPWTGRNDWPSVIGSVGNNAPSSRGRVVRVTWHLVLDATPMVARPVHLDGTSVYGLSTEGLVRRHDLETIIVNGTPVKPPFAQAWMQLPSWVTQGRSGGVAGAPGMTSVSSSGGVRGEIDDFDRSGRRSGGKFERRIPMDLSGTAMAFQGLAEVRAASITRRRKGLLAAVGFDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQRQLTPQ 528          
BLAST of mRNA_Ecto-sp13_S_contig6959.17971.1 vs. uniprot
Match: D8LJ76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ76_ECTSI)

HSP 1 Score: 437 bits (1125), Expect = 6.530e-151
Identity = 266/343 (77.55%), Postives = 272/343 (79.30%), Query Frame = 0
Query:    1 SGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQVRVTWHLVLDATPMVARPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQAWMQLPSWVTKGRSGGVAGAPGTISVSSSGG-VRGGIDDFNRSGRR-SGGHFERRMPVDLSGTAMAFQGLAEVRAASLTSRRKGELAAVGFDASSSWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRGDSPNGERSIARSKXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQRQLTPQ 341
            SGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQVR+TWHLVLDATPMV RPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQAWMQLPSWVT+GRSGGVAGAPG ISVSSS G V GG+DDFNRSGRR SGG+FERR+PVDLSGTAMAFQGLA VRAAS+T                   XXXXXXXXXXXXXXXXXXXXXXXX                                            XXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQRQL PQ
Sbjct:   60 SGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQVRITWHLVLDATPMVVRPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQAWMQLPSWVTQGRSGGVAGAPGMISVSSSSGDVWGGMDDFNRSGRRRSGGNFERRIPVDLSGTAMAFQGLAGVRAASITRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------XXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQRQLAPQ 363          
BLAST of mRNA_Ecto-sp13_S_contig6959.17971.1 vs. uniprot
Match: A0A6H5KRU5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRU5_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 3.800e-47
Identity = 153/336 (45.54%), Postives = 194/336 (57.74%), Query Frame = 0
Query:    1 SGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQVRVTWHLVLDATPMVARPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQAWMQLPSWVTKGRSGGVAGAPGTISVSSSGGVRGGIDDFNRSGRRSGGHFERRMPVDLSGTAMAFQGLAEVRAASLTSRRKGELAAVGFDASSSWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRGDSPNGERSIARSKXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQR 336
            +GV   G+  YKR+F T RF R+T ++D +T FRL+YD S+QQVRVTW++VL       RP+++DG S Y ++++GL  RHD+ET++VNG  V+PPFA AW+ LP+WV++G     +GA   +    +  V GG              FE++           F            +R   EL      A S+             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       N               G W       LACETS+DCTGG VCCD V++K+CCSNG+ Q K G+LIPSL+PIPGRGR E D  +R
Sbjct:  172 TGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNVVLQLKAR-QRPIYVDGISAYHINSDGLAHRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPSGAGAALPTPHA--VIGGAPTQL---------FEQQQGEAEDAVGAMFDA----------ARTDSELRGDYMQALSTVLMMDTDGVSESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNNA-------------GGWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNENDNPKR 472          
BLAST of mRNA_Ecto-sp13_S_contig6959.17971.1 vs. uniprot
Match: A0A7S2VCF0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCF0_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.430e-11
Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 0
Query:    1 SGVVLTGLPAYKRMFGTFR-FVRKTLVHDVSTVFRLSYDGSRQQVRVTWHLVLDATPMVARPVHLDGTSVYGLSTE-GLVRRHDVETIIVNGTPVKPPF 97
            SGV L GL  YK  F  F+ F+R          FR+ YD +R  +R++W++VL     + RP+H+DG S Y L  + G V  H +E +++N +PV PP+
Sbjct:  113 SGVRLNGLKQYKSAFAFFQTFIRFWFSEKSGLQFRMVYDFARCSIRISWNVVLVPKVPLGRPLHVDGISYYQLDRKSGKVVEHKIENLLINNSPVAPPY 211          
BLAST of mRNA_Ecto-sp13_S_contig6959.17971.1 vs. uniprot
Match: A0A7R9WVZ4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVZ4_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.020e-9
Identity = 38/99 (38.38%), Postives = 54/99 (54.55%), Query Frame = 0
Query:    1 SGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTV-FRLSYDGSRQQVRVTWHLVLDATPMVARPVHLDGTSVYGLSTE-GLVRRHDVETIIVNGTPVKPPF 97
            SGV + GL  YK      +   K    + S + FR+ YD  R  ++V+W+ VL     + RPV++DG SVY L  E G +  H  E +I+N TPV PP+
Sbjct:  114 SGVTIQGLDNYKSSIKFLQTFLKFWFKERSGLQFRMVYDFCRSSIKVSWNAVLIPKVPLGRPVYVDGISVYKLDVESGKIMEHKFENLIINNTPVVPPY 212          
BLAST of mRNA_Ecto-sp13_S_contig6959.17971.1 vs. uniprot
Match: B7FQ59_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ59_PHATC)

HSP 1 Score: 67.0 bits (162), Expect = 4.260e-9
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 0
Query:    1 SGVVLTGLPAYKRMFGTFR------FVRKTLVHDVSTVFRLSYDGSRQQVRVTWHLVLDATPMVARPVHLDGTSVYGLS-TEGLVRRHDVETIIVNGTPVKPPF 97
            SGV LTGL  YK  F  F+      F  +++V       R+ YD  R  +R++W+ VL     + RP+++DG S Y L    G +  H +E +++N TPV PP+
Sbjct:  117 SGVQLTGLDKYKSAFAFFQTFVGFWFSSRSVVQS-----RMVYDFCRSSIRISWNAVLVPKFPLGRPLYVDGVSYYQLDRVSGKIVEHKIEKLMINNTPVAPPY 215          
BLAST of mRNA_Ecto-sp13_S_contig6959.17971.1 vs. uniprot
Match: A0A8J5XCD4_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCD4_DIALT)

HSP 1 Score: 67.0 bits (162), Expect = 8.210e-9
Identity = 38/98 (38.78%), Postives = 51/98 (52.04%), Query Frame = 0
Query:    1 SGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDG-SRQQVRVTWHLVLDATPMVARPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPF 97
            SGV + GL  Y+  F   R +R T+        ++ Y G    +VRV W+L   +     R   +DG S Y LS  GLVRRH ++ IIVNG  V+ PF
Sbjct:  110 SGVSIRGLSMYRSCFTLLRLMRYTMA-SAEMKCKVCYAGWDPYKVRVRWNLAFSSALSPGRTYFIDGVSAYTLSERGLVRRHSLDNIIVNGREVEQPF 206          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6959.17971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JCH5_9PHAE2.280e-15680.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ76_ECTSI6.530e-15177.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRU5_9PHAE3.800e-4745.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2VCF0_9STRA1.430e-1138.38Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7R9WVZ4_9STRA1.020e-938.38Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
B7FQ59_PHATC4.260e-935.58Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A8J5XCD4_DIALT8.210e-938.78Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018790Protein of unknown function DUF2358PFAMPF10184DUF2358coord: 6..81
e-value: 4.8E-5
score: 23.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6959contigEcto-sp13_S_contig6959:5862..7748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6959.17971.1mRNA_Ecto-sp13_S_contig6959.17971.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6959 5862..7748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6959.17971.1 ID=prot_Ecto-sp13_S_contig6959.17971.1|Name=mRNA_Ecto-sp13_S_contig6959.17971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=342bp
SGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQVRVTWHL
VLDATPMVARPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQA
WMQLPSWVTKGRSGGVAGAPGTISVSSSGGVRGGIDDFNRSGRRSGGHFE
RRMPVDLSGTAMAFQGLAEVRAASLTSRRKGELAAVGFDASSSWSSSGSN
DGGGMMIWKVSSEGGGGGSAESGKEGGASSPPPDGRGGSGQDKDDTSSRG
DSPNGERSIARSKKKKKKKGMWPIDYKGPLACETSFDCTGGYVCCDLVVV
KICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQRQLTPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018790DUF2358