prot_Ecto-sp13_S_contig6957.17967.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6957.17967.1
Unique Nameprot_Ecto-sp13_S_contig6957.17967.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length82
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6957.17967.1 vs. uniprot
Match: D7FQZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQZ5_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.480e-19
Identity = 66/84 (78.57%), Postives = 68/84 (80.95%), Query Frame = 0 
Query:    1 MLPMVWAMASNMPFVKEVMGSGSSKGKXXXXXXXXXXXXSSRAAPPRDDYDYDRMGGGYXXXXXXXXXXXXXX----RWGGYDE 80
            MLPMVWAMASNMPF+KE+MGSGSSKGKXXXXXXXXXXXX  RAAP RDDYDYDR GGGY        XXXXXX    RWGGYDE
Sbjct:  312 MLPMVWAMASNMPFIKEIMGSGSSKGKXXXXXXXXXXXXXXRAAPSRDDYDYDRQGGGYGYDDDGWDXXXXXXXXXXRWGGYDE 395
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BLAST of mRNA_Ecto-sp13_S_contig6957.17967.1 vs. uniprot
Match: A0A6H5KWX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX1_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 4.000e-14
Identity = 70/82 (85.37%), Postives = 71/82 (86.59%), Query Frame = 0 
Query:    1 MLPMVWAMASNMPFVKEVMGSGSSKGKXXXXXXXXXXXXSSRAAPPRDDYDYDRMGGGYXXXXXXXXXXXXXX-RWGGYDEQ 81
            MLPMVWAMASNMPFVKE+MGSGSSKGKXXXXXXXXXXXX SRAAP RDDYD        XXXXXXXXXXXXXX RWGGYDEQ
Sbjct:  366 MLPMVWAMASNMPFVKEIMGSGSSKGKXXXXXXXXXXXXXSRAAPSRDDYDXXXXXXXXXXXXXXXXXXXXXXXRWGGYDEQ 447
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6957.17967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQZ5_ECTSI2.480e-1978.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWX1_9PHAE4.000e-1485.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6957contigEcto-sp13_S_contig6957:7116..7669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6957.17967.1mRNA_Ecto-sp13_S_contig6957.17967.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6957 4979..7782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6957.17967.1 ID=prot_Ecto-sp13_S_contig6957.17967.1|Name=mRNA_Ecto-sp13_S_contig6957.17967.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=82bp
MLPMVWAMASNMPFVKEVMGSGSSKGKKGRSGNSSRQKRSSRAAPPRDDY
DYDRMGGGYGYDDDWDNGGGGGGRWGGYDEQ*
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