prot_Ecto-sp13_S_contig6956.17965.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6956.17965.1
Unique Nameprot_Ecto-sp13_S_contig6956.17965.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
BLAST of mRNA_Ecto-sp13_S_contig6956.17965.1 vs. uniprot
Match: D8LJM9_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM9_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 3.290e-45
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0
Query:    1 MKTSLGHVGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNEQ 91
            MKTSLGH+GNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNEQ
Sbjct:    1 MKTSLGHIGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNEQ 91          
BLAST of mRNA_Ecto-sp13_S_contig6956.17965.1 vs. uniprot
Match: A0A482V5T6_9ARCH (Brix domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V5T6_9ARCH)

HSP 1 Score: 81.6 bits (200), Expect = 1.190e-17
Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    6 GHVGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNE 90
            GH+ NK KR+E+Y K KG KK  +K+       E +ELGE APPKQ P+T+E+TR  D T V P DDE+  DE +DEF++ FSNE
Sbjct:    5 GHIKNKVKRSEVYAKYKGQKKKLKKELRKLREKEVEELGEAAPPKQIPRTIENTRKHDETFVDPEDDEIAGDEKDDEFSKIFSNE 89          
BLAST of mRNA_Ecto-sp13_S_contig6956.17965.1 vs. uniprot
Match: A0A7S2LC39_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LC39_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 5.060e-15
Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    6 GHVGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNE 90
            GH+ NK KR+E+Y K    KKA ++        EA+ LGE+AP KQ P+TL++TR+ + T V+P D+E+  DEAEDEFA +FS+E
Sbjct:    5 GHIKNKLKRSEIYGKYLLEKKARKRQTRIQRDKEAEALGEDAPKKQTPRTLDNTRESEVTTVQPDDEEILADEAEDEFAPYFSDE 89          
BLAST of mRNA_Ecto-sp13_S_contig6956.17965.1 vs. uniprot
Match: A0A2R5GTI3_9STRA (Ribosome production factor 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTI3_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.060e-14
Identity = 42/85 (49.41%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    5 LGHVGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSN 89
            +  + NKAKR ++ +K K +K+  +++R      EAQELGE+APPKQ PKT +STR+ D TVV P D+EV  DE +DEF+ +F+N
Sbjct:    4 VNDIRNKAKRAQIRQKLKVDKEKAKQERKLKRKREAQELGEDAPPKQVPKTQDSTREADNTVVAPDDEEVLADEEQDEFSEYFAN 88          
BLAST of mRNA_Ecto-sp13_S_contig6956.17965.1 vs. uniprot
Match: A0A7M7JZC0_VARDE (Brix domain-containing protein n=1 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7JZC0_VARDE)

HSP 1 Score: 75.9 bits (185), Expect = 2.650e-14
Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 0
Query:    1 MKTSLGHVGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNE 90
            M  ++  + NKAKR E+Y K K  K  EQ++       EA+ LGE APPKQ P+TLE+TR+PD T+++P D+EV  D   DEFA +F+ E
Sbjct:   30 MVKNISEIRNKAKRREIYLKLKKQKNKEQREARQRRVKEAKALGENAPPKQIPRTLENTREPDETMLQPGDEEVNLDNLTDEFASYFARE 119          
BLAST of mRNA_Ecto-sp13_S_contig6956.17965.1 vs. uniprot
Match: A0A4D9CX49_9STRA (Brix domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX49_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.850e-13
Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 0
Query:    1 MKTSLGHVGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNEQ 91
            +K  +  + N+ KR E++ K K  KK  +K        EA ELG+EAPPKQ P+TLE+TR+ D T+V+P D EV  DEAEDEF  +FS ++
Sbjct:    2 VKKEVSRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKE 92          
BLAST of mRNA_Ecto-sp13_S_contig6956.17965.1 vs. uniprot
Match: A0A8J6CED4_DIALT (Brix domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CED4_DIALT)

HSP 1 Score: 73.2 bits (178), Expect = 2.040e-13
Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    8 VGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFS 88
            VGNK KR EL  K K NKK E+K R      EA+ LG EAPPKQ PK+L++ R+ D TVV+P D+EV  ++A DEFA  F+
Sbjct:    8 VGNKLKRAELAFKDKANKKKEKKQRQIERRKEAEALGSEAPPKQVPKSLDTMREYDETVVQPDDEEVMGEDAIDEFAEHFT 88          
BLAST of mRNA_Ecto-sp13_S_contig6956.17965.1 vs. uniprot
Match: A0A7S2S9M3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9M3_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 7.570e-13
Identity = 43/91 (47.25%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    1 MKTSLGHVGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAP-PKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNE 90
            ++ + G + NK KR+E+Y K    KKA +K++      +A+ELGE+A   KQ P+TLES R+ ++T+V+P DDE+  DEAEDEFA++FS+E
Sbjct:   27 VRANPGKIKNKLKRSEMYGKYLLEKKAMKKEKRLARDKKAEELGEDAQHDKQVPRTLESAREMEQTMVRPDDDEIVADEAEDEFAKYFSDE 117          
BLAST of mRNA_Ecto-sp13_S_contig6956.17965.1 vs. uniprot
Match: K0RZU9_THAOC (Brix domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZU9_THAOC)

HSP 1 Score: 71.6 bits (174), Expect = 1.020e-12
Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    6 GHVGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNE 90
            GH+ NK KR+E+Y K    KKA+++        +A+ LGE+AP K KP+TL++TR+ + T VK  D+E+  DEAEDEFA +FS+E
Sbjct:   34 GHITNKLKRSEMYGKYLLAKKAQKRASRIAREKQAEALGEDAPAKPKPRTLDNTRESEVTTVKEDDEEIIADEAEDEFAPYFSDE 118          
BLAST of mRNA_Ecto-sp13_S_contig6956.17965.1 vs. uniprot
Match: A0A7S1HW22_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HW22_9EUGL)

HSP 1 Score: 68.6 bits (166), Expect = 1.120e-11
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    1 MKTSLGHVGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNE 90
            ++ + G + +K KR E Y K K  +K E+ +       E +ELG+ APPKQ PKTL+S R PD T+V   D+E+ +DE EDE+A +F +E
Sbjct:   12 VRNTTGQIKDKIKRREAYMKLKQQRKQEKYENRMRKKKEREELGDAAPPKQMPKTLDSMRTPDETMVDEQDEEIQKDEDEDEWASYFKDE 101          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6956.17965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJM9_ECTSI3.290e-4598.90Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A482V5T6_9ARCH1.190e-1752.94Brix domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A7S2LC39_9STRA5.060e-1549.41Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A2R5GTI3_9STRA2.060e-1449.41Ribosome production factor 1 n=1 Tax=Hondaea ferme... [more]
A0A7M7JZC0_VARDE2.650e-1447.78Brix domain-containing protein n=1 Tax=Varroa dest... [more]
A0A4D9CX49_9STRA1.850e-1347.25Brix domain-containing protein n=2 Tax=Monodopsida... [more]
A0A8J6CED4_DIALT2.040e-1354.32Brix domain-containing protein n=2 Tax=Diacronema ... [more]
A0A7S2S9M3_9STRA7.570e-1347.25Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
K0RZU9_THAOC1.020e-1248.24Brix domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S1HW22_9EUGL1.120e-1143.33Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46
NoneNo IPR availablePANTHERPTHR22734:SF3RIBOSOME PRODUCTION FACTOR 1coord: 6..90
NoneNo IPR availablePANTHERPTHR22734U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4coord: 6..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6956contigEcto-sp13_S_contig6956:6049..7851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6956.17965.1mRNA_Ecto-sp13_S_contig6956.17965.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6956 6049..7851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6956.17965.1 ID=prot_Ecto-sp13_S_contig6956.17965.1|Name=mRNA_Ecto-sp13_S_contig6956.17965.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
MKTSLGHVGNKAKRTELYRKQKGNKKAEQKDRRRRREREAQELGEEAPPK
QKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNEQ
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