prot_Ecto-sp13_S_contig69540.17961.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69540.17961.1
Unique Nameprot_Ecto-sp13_S_contig69540.17961.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length159
Homology
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BLAST of mRNA_Ecto-sp13_S_contig69540.17961.1 vs. uniprot
Match: D8LS27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS27_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 3.360e-5
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0 
Query:    1 MDELVSSLLLRGADKDALSVLGKTPLMLASR 31
            MDEL SSLLLR AD+DALSVLGKTPLM ASR
Sbjct:   34 MDELASSLLLREADEDALSVLGKTPLMRASR 64
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69540.17961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LS27_ECTSI3.360e-587.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 22..37
score: 38.17
coord: 70..84
score: 33.58
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 120..149
e-value: 0.17
score: 21.0
coord: 54..83
e-value: 0.001
score: 28.3
coord: 21..50
e-value: 2.0E-4
score: 30.7
coord: 87..116
e-value: 0.34
score: 20.0
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 22..50
e-value: 4.4E-6
score: 26.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 21..53
score: 11.861
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 87..119
score: 10.686
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 120..152
score: 10.953
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 54..86
score: 11.461
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..78
e-value: 2.8E-20
score: 74.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 79..159
e-value: 3.8E-23
score: 83.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..159
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 59..147
e-value: 1.9E-14
score: 54.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..159
score: 49.313
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 4..97
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 56..159
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 4..97
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 56..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69540contigEcto-sp13_S_contig69540:34..510 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69540.17961.1mRNA_Ecto-sp13_S_contig69540.17961.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69540 7..510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69540.17961.1 ID=prot_Ecto-sp13_S_contig69540.17961.1|Name=mRNA_Ecto-sp13_S_contig69540.17961.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=159bp
MDELVSSLLLRGADKDALSVLGKTPLMLASRWGHLSAVHALLAAGADVTA
MEPLGRSALGYAAKGGYVDVLEAIIGHGADVNARGDLNETALHTAARRDG
AGAVNALIEVGADINARAYDGTTPLMYAALFNRRDSVLALLERGASLAGE
DSDGSTALH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom