mRNA_Ecto-sp13_S_contig6954.17960.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6954.17960.1 vs. uniprot
Match: D7FW94_ECTSI (Disproportionate superoxide radical into hydrogen peroxide n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW94_ECTSI) HSP 1 Score: 298 bits (762), Expect = 5.740e-102 Identity = 152/156 (97.44%), Postives = 153/156 (98.08%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLSQAQEEAPTIIAGEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 468
MAKASCVMTSDEEGLTGSLMLSQAQEEAPTII+GEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHEL TTGNAGARV GGVVGIAASK
Sbjct: 1 MAKASCVMTSDEEGLTGSLMLSQAQEEAPTIISGEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELFFTTGNAGARVWGGVVGIAASK 156
BLAST of mRNA_Ecto-sp13_S_contig6954.17960.1 vs. uniprot
Match: A0A835Z8H2_9STRA (Disproportionate superoxide radical into hydrogen peroxide n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H2_9STRA) HSP 1 Score: 237 bits (605), Expect = 4.740e-78 Identity = 115/156 (73.72%), Postives = 135/156 (86.54%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLSQAQEEAPTIIAGEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 468
MAKASC EEG+ G L SQAQE+A TII G+I+G+RPGRHG+ VH+FGDFSEGL SAGGIFNPF KNHGAPDDE+RMVGDLGN++AD+ GVCK+ +ED +V+LIGPHS+IGRSII+ A EDDLGRGGHELSL+TGN+GARV GGV+GIA SK
Sbjct: 1 MAKASCTFAG-EEGVKGLLTFSQAQEDASTIIEGQISGLRPGRHGLHVHIFGDFSEGLTSAGGIFNPFGKNHGAPDDEERMVGDLGNVEADEEGVCKIAIEDSLVKLIGPHSVIGRSIIVKANEDDLGRGGHELSLSTGNSGARVAGGVIGIAPSK 155
BLAST of mRNA_Ecto-sp13_S_contig6954.17960.1 vs. uniprot
Match: A0A2Z5VKR9_CHAMQ (Cu Zn superoxide dismutase n=1 Tax=Chattonella marina var. antiqua TaxID=859642 RepID=A0A2Z5VKR9_CHAMQ) HSP 1 Score: 235 bits (600), Expect = 2.740e-77 Identity = 114/156 (73.08%), Postives = 138/156 (88.46%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLSQAQEEAPTIIAGEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 468
MA++ CVMT E+G++G L+LSQAQE+A TII G ++G+ PG+HGI +HVFGDFS+GL SAGGIFNPF KNHGAPDDE+RMVGDLGNI+ D+ G ++H+EDR+V+LIGPHSIIGRSIIIT+GEDDLGRGGHELSLT GN+G RV GGVVGIA+SK
Sbjct: 1 MARSMCVMTG-EDGVSGHLVLSQAQEDAATIIDGVVSGLTPGKHGIHIHVFGDFSQGLTSAGGIFNPFGKNHGAPDDEERMVGDLGNIEVDEEGQAQIHIEDRLVKLIGPHSIIGRSIIITSGEDDLGRGGHELSLTNGNSGPRVAGGVVGIASSK 155
BLAST of mRNA_Ecto-sp13_S_contig6954.17960.1 vs. uniprot
Match: D7FM93_ECTSI (Copper/zinc superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM93_ECTSI) HSP 1 Score: 231 bits (589), Expect = 3.560e-76 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1
Query: 124 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 468
GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK
Sbjct: 2 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 116
BLAST of mRNA_Ecto-sp13_S_contig6954.17960.1 vs. uniprot
Match: A0A7S2UTD5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTD5_9STRA) HSP 1 Score: 229 bits (584), Expect = 7.490e-75 Identity = 110/156 (70.51%), Postives = 134/156 (85.90%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLSQAQEEAPTIIAGEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 468
MA++ CV+ E+G++G L+LSQAQE+APTII GEI G+ PGRHG VHVFGDFS+G +SAGGIFNPF KNHGAPDDE+RM GDLGNI+ +D GV V +EDR+++LIGPHS+IGR I+IT+GEDDLGRGGHELSLT GN+G RV GGV+GIA+SK
Sbjct: 1 MARSMCVIAG-EDGVSGYLVLSQAQEDAPTIIEGEIRGLTPGRHGFHVHVFGDFSQGFISAGGIFNPFGKNHGAPDDEERMAGDLGNIEVNDEGVAMVRMEDRVLKLIGPHSVIGRCIVITSGEDDLGRGGHELSLTNGNSGPRVAGGVIGIASSK 155
BLAST of mRNA_Ecto-sp13_S_contig6954.17960.1 vs. uniprot
Match: A0A7S3JNV1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JNV1_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.060e-69 Identity = 110/155 (70.97%), Postives = 126/155 (81.29%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLSQAQEEAPTIIAGEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 465
MA+ SCV+T EG++G L LSQ EE+ T I G I G+ PG HGI VH+FGDFS+GL SAGGIFNPF+KNHGAPD +DRMVGDLGNI+ + G C +H+ED +V+LIGPHSIIGRSIII AGEDDLGRGGHELSLTTGN G RV GGVVGIA S
Sbjct: 1 MARCSCVLTG--EGVSGVLTLSQPSEESATRIDGTINGLTPGLHGIHVHIFGDFSQGLTSAGGIFNPFAKNHGAPDADDRMVGDLGNIEVAEDGSCTIHIEDSLVKLIGPHSIIGRSIIIFAGEDDLGRGGHELSLTTGNPGPRVAGGVVGIAPS 153
BLAST of mRNA_Ecto-sp13_S_contig6954.17960.1 vs. uniprot
Match: A0A8J2SRW2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRW2_9STRA) HSP 1 Score: 212 bits (540), Expect = 3.520e-68 Identity = 102/155 (65.81%), Postives = 125/155 (80.65%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLSQAQEEAPTIIAGEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 465
MA+ SCV+T G+TG+L+LSQ E PT+I G I+G+ PG HGI VH+FGDFS+GL SAGGIFNPF++NHG P+DE+RM GDLGN++ + G C VH+EDR V+LIGPHSIIGRSI++ GEDD G+GGHELSL+TGN G RV GGVVGIA S
Sbjct: 1 MARCSCVLTGT--GVTGTLVLSQPSESQPTVIDGSISGLAPGLHGIHVHIFGDFSQGLTSAGGIFNPFARNHGGPNDEERMAGDLGNLEVAEDGSCSVHIEDRHVKLIGPHSIIGRSIVVFGGEDDFGKGGHELSLSTGNPGPRVAGGVVGIAPS 153
BLAST of mRNA_Ecto-sp13_S_contig6954.17960.1 vs. uniprot
Match: A0A7S2WW13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW13_9STRA) HSP 1 Score: 210 bits (535), Expect = 4.310e-67 Identity = 101/155 (65.16%), Postives = 123/155 (79.35%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLSQAQEEAPTIIAGEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 465
MA++ C++ EG+ G L QAQE+APT I G I G+ PG H I +H FGDF++GL SAGGIFNPF KNHGAPDDE+RMVGDLGNI+ D AG C VH+EDR+V+LIGPHS+IGRS++I GEDDLGRG H+LSL GN+G R+ GGVVGIA+S
Sbjct: 24 MARSMCILIG--EGIRGELSFDQAQEDAPTRIDGTIEGLTPGTHAIHIHTFGDFAQGLTSAGGIFNPFGKNHGAPDDEERMVGDLGNIEVDAAGRCTVHIEDRLVKLIGPHSVIGRSVLIKQGEDDLGRGQHDLSLVNGNSGQRIAGGVVGIASS 176
BLAST of mRNA_Ecto-sp13_S_contig6954.17960.1 vs. uniprot
Match: A0A7S2MFL1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MFL1_9STRA) HSP 1 Score: 205 bits (522), Expect = 2.860e-65 Identity = 97/152 (63.82%), Postives = 120/152 (78.95%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLSQAQEEAPTIIAGEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGI 456
MAK +C + + ++GSL LSQ E+APTII GEI G+ PG+H I VHV+GD ++G S G IFNPF KNHGAP+DE+RMVGDLGN+ D G VH+ED++V+LIGPHS+IGRSI++ AGEDD GRGGHELSLTTGN+GARV GV+GI
Sbjct: 12 MAKCTCTLNGEGGSVSGSLRLSQLSEDAPTIIQGEIKGLSPGKHAISVHVYGDLTDGATSGGAIFNPFGKNHGAPEDEERMVGDLGNVITTDDGKTAVHIEDKVVKLIGPHSVIGRSIVVHAGEDDCGRGGHELSLTTGNSGARVAAGVIGI 163
BLAST of mRNA_Ecto-sp13_S_contig6954.17960.1 vs. uniprot
Match: A0A7S1XLZ7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLZ7_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.880e-63 Identity = 97/156 (62.18%), Postives = 121/156 (77.56%), Query Frame = 1
Query: 1 MAKASCVMTSDE-EGLTGSLMLSQAQEEAPTIIAGEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 465
MA+ V +DE E +G L L Q+ E+APT+IAG I G+ PG HG+ +HVFGD S G+ + GIFNPF +NHGAP+DE+RM GDLGNI A++ GV +V +EDR V+LIGPHS+IGRSI++ AGEDDLGRGGHELSL GN+GARV G V+GIA S
Sbjct: 1 MARCVAVFVADEGEEASGFLTLEQSMEDAPTVIAGRIEGLTPGPHGLHIHVFGDLSSGMANVAGIFNPFGRNHGAPEDEERMAGDLGNITANEEGVAEVQIEDRQVKLIGPHSVIGRSIVLKAGEDDLGRGGHELSLADGNSGARVAGAVIGIAMS 156 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6954.17960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6954.17960.1 >prot_Ecto-sp13_S_contig6954.17960.1 ID=prot_Ecto-sp13_S_contig6954.17960.1|Name=mRNA_Ecto-sp13_S_contig6954.17960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp MAKASCVMTSDEEGLTGSLMLSQAQEEAPTIIAGEIAGMRPGRHGIRVHVback to top mRNA from alignment at Ecto-sp13_S_contig6954:4806..7531- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6954.17960.1 ID=mRNA_Ecto-sp13_S_contig6954.17960.1|Name=mRNA_Ecto-sp13_S_contig6954.17960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2726bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6954:4806..7531- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6954:4806..7531- >mRNA_Ecto-sp13_S_contig6954.17960.1 ID=mRNA_Ecto-sp13_S_contig6954.17960.1|Name=mRNA_Ecto-sp13_S_contig6954.17960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6954:4806..7531- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |