prot_Ecto-sp13_S_contig6953.17954.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6953.17954.1
Unique Nameprot_Ecto-sp13_S_contig6953.17954.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length171
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6953.17954.1 vs. uniprot
Match: Q8QNN1_ESV1K (EsV-1-30 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNN1_ESV1K)

HSP 1 Score: 303 bits (776), Expect = 7.580e-102
Identity = 149/171 (87.13%), Postives = 163/171 (95.32%), Query Frame = 0 
Query:    1 MSDIVFGSNDLLSEILSFRRRDEYLFVGTVNKAFHSLFHSRQTNVALCVETVSRLQDSEIQSLENSNHVMRCGSVDVMRHALSSGLVDNLNGAIEHAIRSNDGSLITILEKEFHESRIGPACLVAAVESGSLALVQKYCVDGVLDARAVNFGLEDNFFYPFDMTAKRMICR 171
            MSDIVFG+NDLLSEILSF RRDEYLFVGTVNKAFH+L+H+RQTNVA+CVETVS L+DS IQSL NSNHVM+CGSVDVMRHALSSGLVDNLNGA+EHAIRSND  +IT+LEKEFHE+RIGPACLVAAVESGSLALVQKYCVDGVLDARA NFGLED++ YPFDM+AKRMICR
Sbjct:    1 MSDIVFGNNDLLSEILSFGRRDEYLFVGTVNKAFHALYHARQTNVAVCVETVSCLKDSGIQSLRNSNHVMQCGSVDVMRHALSSGLVDNLNGALEHAIRSNDCDMITVLEKEFHETRIGPACLVAAVESGSLALVQKYCVDGVLDARAANFGLEDSYCYPFDMSAKRMICR 171
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BLAST of mRNA_Ecto-sp13_S_contig6953.17954.1 vs. uniprot
Match: D8LP67_ECTSI (EsV-1-30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP67_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.100e-54
Identity = 85/102 (83.33%), Postives = 96/102 (94.12%), Query Frame = 0 
Query:   70 MRCGSVDVMRHALSSGLVDNLNGAIEHAIRSNDGSLITILEKEFHESRIGPACLVAAVESGSLALVQKYCVDGVLDARAVNFGLEDNFFYPFDMTAKRMICR 171
            M+CGS++VMRHA+SSGLVDNLNGA+EHAIRSND  +IT+L+ EFHE+RIGPACLVAAVESG+LALVQKYCVDGVLDA A NFGLED+F YPFDMTAKRMICR
Sbjct:    1 MQCGSIEVMRHAMSSGLVDNLNGALEHAIRSNDCDMITVLDNEFHETRIGPACLVAAVESGALALVQKYCVDGVLDASAANFGLEDSFCYPFDMTAKRMICR 102
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6953.17954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QNN1_ESV1K7.580e-10287.13EsV-1-30 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D8LP67_ECTSI1.100e-5483.33EsV-1-30 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6953contigEcto-sp13_S_contig6953:1174..1686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6953.17954.1mRNA_Ecto-sp13_S_contig6953.17954.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6953 1174..1686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6953.17954.1 ID=prot_Ecto-sp13_S_contig6953.17954.1|Name=mRNA_Ecto-sp13_S_contig6953.17954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=171bp
MSDIVFGSNDLLSEILSFRRRDEYLFVGTVNKAFHSLFHSRQTNVALCVE
TVSRLQDSEIQSLENSNHVMRCGSVDVMRHALSSGLVDNLNGAIEHAIRS
NDGSLITILEKEFHESRIGPACLVAAVESGSLALVQKYCVDGVLDARAVN
FGLEDNFFYPFDMTAKRMICR
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