prot_Ecto-sp13_S_contig6950.17950.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6950.17950.1
Unique Nameprot_Ecto-sp13_S_contig6950.17950.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length664
Homology
BLAST of mRNA_Ecto-sp13_S_contig6950.17950.1 vs. uniprot
Match: A0A6H5JJ43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ43_9PHAE)

HSP 1 Score: 1045 bits (2702), Expect = 0.000e+0
Identity = 581/645 (90.08%), Postives = 594/645 (92.09%), Query Frame = 0
Query:   20 DENASIIRLLRIFLGAAVGDEDHDNTPLSAPPSLPDSTCAPPLPATSPQAPPRAESPLTGKRDPCLPGGDRLERNSPKLLDQPPKPQRTAESETDMASVPDAREQAGCALWDMSGEEGNASAMCSAGLVAVSCAVLHQCASAIASAAAEARAGGLCSSKSLAPVEAKDAAMAVAPPLQYREEQVERLREVTCGLLANVFSHRSLRQQIAGDLALGQELLGVFHSTDDPACLTELLRLFSSVALIKSTESAYAAKAMKGDNGDAQAAGSTGDPVGDGRAATAVSPEANLSSEIHGEGQTAAGALRMVAGAAGSAEASSGAVEISSEPAAGENRTVVTSVARERNEAEATAVPASAPNTEGAALAMAARGSAGLASGIAAGETLERLAFFLQNSLEERLLAWACSLTYSLMYRHGDAVIRPLIEVFGLEESLCSLLQSRSGDLAYEKLGSTETGFDALLRCLEVLTTSEVSGVGPPLSPAAAEPPVVVDPXALTQASGEPSQEQXHNEQPRKRRKLAEEGTTERPTNGGENCEAACEVQPETSKTRPSLSRGEMRGRVIRGLVSALTPWEHSRQSQRAALLVLGNILENSIEEEAGAVGGVKSTEGARSASESCAVELDRGLAALAAGGTGEWVEDDARDPAAAVRR 664
            DE ASIIRLLRIFLGAAVGDEDH+NTPLSAPPSLPDST APPLPATSP+APPRAESPLTGK DPCLPGGDRLERNSPKLL QP KPQRTAESETDMASVPDAREQAGCALWDMS +EGNA AMCSAGLVAVSCAVL QCASAI SAAAEARAGGL SSKSLAPVEAK+AAMAVAPPL  REEQVERLREVTCGLLANVFSHRSLRQQIAGDLALGQELLG FHSTDDPACLTELLRLFS+ ALIKSTESAYA KAM  DNGDAQ AGST DPVGDGRAAT   PE NLS +IHGEGQTAAGALRMVAGAAG+AEA+ GAVEISS+PAAGENRT VT V RERNEAEATAVPAS PNT GAALAMAA GSAGLASGIAA ETLERLAFFLQNSLEERLLAWACSLTYSLMYRHGDAVIRPLIEVFGLEESLCSLLQSRSGDLAYEKLG TETGFDALLRCLEVLTTSEVSGVGPP SPAAAEPPVVVDP AL Q SGE S +Q  NEQPRKRR LAEE T E PTNGG +CEAACEVQPETSKTRPSLSRGEMRGRVIRGLVSALTPWEHSR SQRAALLVLGNILEN+IEE+AGAVGGVKS EGAR ASESCAVELDRGLAALAAGGTGEW EDD RDPAAAVRR
Sbjct:    7 DEKASIIRLLRIFLGAAVGDEDHENTPLSAPPSLPDSTSAPPLPATSPKAPPRAESPLTGKPDPCLPGGDRLERNSPKLLGQPRKPQRTAESETDMASVPDAREQAGCALWDMSADEGNAFAMCSAGLVAVSCAVLRQCASAIVSAAAEARAGGLSSSKSLAPVEAKEAAMAVAPPLPDREEQVERLREVTCGLLANVFSHRSLRQQIAGDLALGQELLGAFHSTDDPACLTELLRLFSTAALIKSTESAYATKAMNEDNGDAQVAGSTNDPVGDGRAATTALPETNLSGDIHGEGQTAAGALRMVAGAAGAAEAALGAVEISSKPAAGENRTAVTLVTRERNEAEATAVPASEPNTAGAALAMAAWGSAGLASGIAAEETLERLAFFLQNSLEERLLAWACSLTYSLMYRHGDAVIRPLIEVFGLEESLCSLLQSRSGDLAYEKLGGTETGFDALLRCLEVLTTSEVSGVGPPSSPAAAEPPVVVDPPALAQDSGELSPKQQLNEQPRKRRNLAEESTEEGPTNGGGDCEAACEVQPETSKTRPSLSRGEMRGRVIRGLVSALTPWEHSRHSQRAALLVLGNILENAIEEDAGAVGGVKSPEGARRASESCAVELDRGLAALAAGGTGEWAEDDERDPAAAVRR 651          
BLAST of mRNA_Ecto-sp13_S_contig6950.17950.1 vs. uniprot
Match: D7FSE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSE1_ECTSI)

HSP 1 Score: 954 bits (2465), Expect = 0.000e+0
Identity = 545/664 (82.08%), Postives = 563/664 (84.79%), Query Frame = 0
Query:    1 MDVMHQDGGSNLYNEGDPSDENASIIRLLRIFLGAAVGDEDHDNTPLSAPPSLPDSTCAPPLPATSPQAPPRAESPLTGKRDPCLPGGDRLERNSPKLLDQPPKPQRTAESETDMASVPDAREQAGCALWDMSGEEGNASAMCSAGLVAVSCAVLHQCASAIASAAAEARAGGLCSSKSLAPVEAKDAAMAVAPPLQYREEQVERLREVTCGLLANVFSHRSLRQQIAGDLALGQELLGVFHSTDDPACLTELLRLFSSVALIKSTESAYAAKAMKGDNGDAQAAGSTGDPVGDGRAATAVSPEANLSSEIHGEGQTAAGALRMVAGAAGSAEASSGAVEISSEPAAGENRTVVTSVARERNEAEATAVPASAPNTEGAALAMAARGSAGLASGIAAGETLERLAFFLQNSLEERLLAWACSLTYSLMYRHGDAVIRPLIEVFGLEESLCSLLQSRSGDLAYEKLGSTETGFDALLRCLEVLTTSEVSGVGPPLSPAAAEPPVVVDPXALTQASGEPSQEQXHNEQPRKRRKLAEEGTTERPTNGGENCEAACEVQPETSKTRPSLSRGEMRGRVIRGLVSALTPWEHSRQSQRAALLVLGNILENSIEEEAGAVGGVKSTEGARSASESCAVELDRGLAALAAGGTGEWVEDDARDPAAAVRR 664
            MDVMH+DGG NLYNEGDPSDENASIIRLLRIFLGAAVGD+D DNTP SAPPSLPDST APPLPA         +SPLTGK DPCL GGD L RNSPKLL QPPK QRTAESETDMASVPDAREQAGCALWDMS EE NASAMCSAGLVAVSCAVL QCA+AI SAAAEARAGGL SSKSL P EAK+AAMAVAPPL  RE QVERLREVTCGLLANVFSHR LRQQIAGDLALGQELLG FHSTDDPACLTELLRLFS+ AL+KSTESAY          DA AAGST DPVGDGRAAT VSPE N S EIHGEG T AGALRMVAGAAG+AEA+SG VE+SSEPA G+NRT VTS ARERNEAEATAV ASAPNTEGAALA+AARGSAGLASGIAAGETLERLAFFL NSLEERLLAWACSLTYSLMYRHGDAVIRPLIEVFGLE+SLCSLLQSRSGDLAYEKLG TETGFDALLRCLEVLTTS+VSGVGPP              X             X        RKLAEEGT E PTNGGENCEA CEVQPETSKTRPSL RGEMRGRVIRGLVSALTPWEHSR+SQ+AALLVLGNILEN+IEE+AGAVGGVKSTEGARSASESCAVELDRGLAALAAGG GEW ED  RDPAAAV R
Sbjct:    1 MDVMHEDGGGNLYNEGDPSDENASIIRLLRIFLGAAVGDQDDDNTPPSAPPSLPDSTSAPPLPAXXXXXXXLGQSPLTGKPDPCLSGGDCLGRNSPKLLGQPPKLQRTAESETDMASVPDAREQAGCALWDMSAEERNASAMCSAGLVAVSCAVLRQCANAIVSAAAEARAGGLSSSKSLMPAEAKEAAMAVAPPLPPRE-QVERLREVTCGLLANVFSHRGLRQQIAGDLALGQELLGAFHSTDDPACLTELLRLFSTAALMKSTESAY----------DAHAAGSTNDPVGDGRAATTVSPEPNRSGEIHGEGHTGAGALRMVAGAAGAAEAASGPVELSSEPAVGDNRTAVTSAARERNEAEATAVSASAPNTEGAALAIAARGSAGLASGIAAGETLERLAFFLGNSLEERLLAWACSLTYSLMYRHGDAVIRPLIEVFGLEKSLCSLLQSRSGDLAYEKLGGTETGFDALLRCLEVLTTSKVSGVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLAEEGTAEGPTNGGENCEAVCEVQPETSKTRPSLGRGEMRGRVIRGLVSALTPWEHSRRSQKAALLVLGNILENAIEEDAGAVGGVKSTEGARSASESCAVELDRGLAALAAGGAGEWAEDGERDPAAAVER 653          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6950.17950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJ43_9PHAE0.000e+090.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSE1_ECTSI0.000e+082.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23424SERUM AMYLOID Acoord: 75..271
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 119..606

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6950contigEcto-sp13_S_contig6950:202..4480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6950.17950.1mRNA_Ecto-sp13_S_contig6950.17950.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6950 202..4587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6950.17950.1 ID=prot_Ecto-sp13_S_contig6950.17950.1|Name=mRNA_Ecto-sp13_S_contig6950.17950.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=664bp
MDVMHQDGGSNLYNEGDPSDENASIIRLLRIFLGAAVGDEDHDNTPLSAP
PSLPDSTCAPPLPATSPQAPPRAESPLTGKRDPCLPGGDRLERNSPKLLD
QPPKPQRTAESETDMASVPDAREQAGCALWDMSGEEGNASAMCSAGLVAV
SCAVLHQCASAIASAAAEARAGGLCSSKSLAPVEAKDAAMAVAPPLQYRE
EQVERLREVTCGLLANVFSHRSLRQQIAGDLALGQELLGVFHSTDDPACL
TELLRLFSSVALIKSTESAYAAKAMKGDNGDAQAAGSTGDPVGDGRAATA
VSPEANLSSEIHGEGQTAAGALRMVAGAAGSAEASSGAVEISSEPAAGEN
RTVVTSVARERNEAEATAVPASAPNTEGAALAMAARGSAGLASGIAAGET
LERLAFFLQNSLEERLLAWACSLTYSLMYRHGDAVIRPLIEVFGLEESLC
SLLQSRSGDLAYEKLGSTETGFDALLRCLEVLTTSEVSGVGPPLSPAAAE
PPVVVDPPALTQASGEPSQEQQHNEQPRKRRKLAEEGTTERPTNGGENCE
AACEVQPETSKTRPSLSRGEMRGRVIRGLVSALTPWEHSRQSQRAALLVL
GNILENSIEEEAGAVGGVKSTEGARSASESCAVELDRGLAALAAGGTGEW
VEDDARDPAAAVRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold