prot_Ecto-sp13_S_contig695.17949.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig695.17949.1
Unique Nameprot_Ecto-sp13_S_contig695.17949.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length123
Homology
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BLAST of mRNA_Ecto-sp13_S_contig695.17949.1 vs. uniprot
Match: D8LGB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB1_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.150e-31
Identity = 60/86 (69.77%), Postives = 64/86 (74.42%), Query Frame = 0 
Query:   26 LAPVQGNGLRALHSLPGREISRVRHACVAQPAEADWRQEVPTLLCYFGLPD---------PTGKTNGDSIQKIHYIHEDGSKSIDR 102
            LAPVQGNGLR  H+LPGREI RVRHACVAQPAEADWRQEVP L C F LPD         P  KTNGDS QKIHYIH DGS+ + +
Sbjct:   36 LAPVQGNGLRPRHALPGREIQRVRHACVAQPAEADWRQEVPPL-CVFLLPDRHRSRCPVHPADKTNGDSTQKIHYIHGDGSECVGK 120
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig695.17949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGB1_ECTSI1.150e-3169.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig695contigEcto-sp13_S_contig695:15804..16669 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig695.17949.1mRNA_Ecto-sp13_S_contig695.17949.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig695 15694..16669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig695.17949.1 ID=prot_Ecto-sp13_S_contig695.17949.1|Name=mRNA_Ecto-sp13_S_contig695.17949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp
GHLRRARKPAPPTAQVYSRRRYAHDLAPVQGNGLRALHSLPGREISRVRH
ACVAQPAEADWRQEVPTLLCYFGLPDPTGKTNGDSIQKIHYIHEDGSKSI
DRARTATLLALGVTTPMSSLMM*
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