mRNA_Ecto-sp13_S_contig6948.17945.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6948.17945.1
Unique NamemRNA_Ecto-sp13_S_contig6948.17945.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6948.17945.1 vs. uniprot
Match: D7FKP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP0_ECTSI)

HSP 1 Score: 509 bits (1311), Expect = 1.260e-171
Identity = 250/260 (96.15%), Postives = 256/260 (98.46%), Query Frame = 1 
Query:    1 QVVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAVHSISEKHREYIYGLFELLGISEERVMFIDKIHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRANKRGLGNNAEVRDALIENFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVRDLFVAKRMADEAEGRD 780
            +VVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAVHSISE HREYIYGLFELLGIS++RV+FI KIHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVR NKRGLGNN EVRDALI+NFPDHDVVEFFGTDPIREQL+LFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVRDLFVAKRMADEAEGRD
Sbjct:  176 KVVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAVHSISESHREYIYGLFELLGISQDRVLFIHKIHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRKNKRGLGNNTEVRDALIQNFPDHDVVEFFGTDPIREQLDLFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVRDLFVAKRMADEAEGRD 435
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BLAST of mRNA_Ecto-sp13_S_contig6948.17945.1 vs. uniprot
Match: A0A6H5JMF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF5_9PHAE)

HSP 1 Score: 447 bits (1150), Expect = 7.250e-147
Identity = 234/285 (82.11%), Postives = 240/285 (84.21%), Query Frame = 1 
Query:    1 QVVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVA----------------------------VHSIS-------EKH------REYIYGLFELLGISEERVMFIDKIHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRANKRGLGNNAEVRDALIENFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVR 732
            +VVVLTQEYGLAYYHLLVENLSRITIVLD+LLENPDIKVA                            V S S       EKH      REYIYGLFELLGIS+ERVMFI+KIHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPP PPKPIMVLIVRANKRGLGNN EVRDALI+NFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTM+LEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVR
Sbjct:  178 KVVVLTQEYGLAYYHLLVENLSRITIVLDVLLENPDIKVAQFSFLFFRAGTYACDQLHDDPMPSTCRLVKSCSRPLIFTVEKHAKVELLREYIYGLFELLGISQERVMFIEKIHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPIPPKPIMVLIVRANKRGLGNNDEVRDALIQNFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMVLEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVR 462
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BLAST of mRNA_Ecto-sp13_S_contig6948.17945.1 vs. uniprot
Match: D7FKN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN9_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 8.330e-96
Identity = 162/259 (62.55%), Postives = 185/259 (71.43%), Query Frame = 1 
Query:    1 QVVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAVHSISEKHREYIYGLFELLGISEERVMFIDKIHADLALVPPATVCGKPNAVLVTLLRHALLQ---------------GMYPDTGGVPPTPPKPIMVLIVRANKRGLGNNAEVRDALIENFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVR 732
            +VVVL QEYG AYYHLLVENLSRIT+V D+L+ENPD+K                                 IHADLA+VPP+TVCGKPNA +V LLRH LLQ               GMYP TGGVPP PP+P++VL+VR  KRGL NNAEVR+AL +NFPD DVVEF G + IR QL +FATAS+IV PHGAGL+N+VVSPLHTMILEIGPI+CP CYVN+AIKLQHIYARH GSD  DD C SWYEPNVDE+V+L R
Sbjct:  272 KVVVLAQEYGQAYYHLLVENLSRITVVKDVLMENPDVK---------------------------------IHADLAIVPPSTVCGKPNAAMVNLLRHHLLQFNLENFPRVQLVGRPGMYPHTGGVPPVPPRPVIVLVVRVKKRGLQNNAEVREALAQNFPDFDVVEFNGVEHIRAQLGMFATASMIVGPHGAGLSNMVVSPLHTMILEIGPIDCPACYVNLAIKLQHIYARHTGSDPGDDPCDSWYEPNVDEVVSLAR 497
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BLAST of mRNA_Ecto-sp13_S_contig6948.17945.1 vs. uniprot
Match: A0A6H5JM62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM62_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 1.620e-92
Identity = 150/258 (58.14%), Postives = 195/258 (75.58%), Query Frame = 1 
Query:    1 QVVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAVHSI---SEKHREYIYGLFELLGISEERVMFID-KIHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRANKRGLGNNAEVRDALIENFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVRDLFVAKRMAD 762
            +VVV+ Q +G  YYH LVE L RIT++LD+L+EN DIKVAVH+    SE H  YIY L  LLGI  ERV+FI  +IHADLA++P +T CG+P+  +V +LR  LL+ MYP T G+PP  P+P++VL+VR ++R L NN +VR+AL + FPDHD+VEF+G  PI  Q++LFATASVIVAPHGAGL+N+V SPLHT +LEIG  +C  CY+++A+KLQH+YARH G+      C+S YEPNVDE+V LVR L  AK+ AD
Sbjct:    6 KVVVIAQYWGDEYYHFLVEALPRITLMLDVLVENLDIKVAVHAPKPGSESHTTYIYELLALLGIESERVIFIQTEIHADLAILPSSTPCGRPDTQMVNMLRSVLLKAMYPRTRGIPPQVPRPVIVLVVRESRRWLKNNDQVREALKQYFPDHDIVEFWGIGPIIRQMQLFATASVIVAPHGAGLSNMVASPLHTPVLEIGSPDCSACYLHLALKLQHVYARHPGTKERRTACASAYEPNVDEVVRLVRGLLEAKQQAD 263
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BLAST of mRNA_Ecto-sp13_S_contig6948.17945.1 vs. uniprot
Match: D7FWK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK4_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 4.590e-92
Identity = 145/265 (54.72%), Postives = 196/265 (73.96%), Query Frame = 1 
Query:    1 QVVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAV--------HSISEKHREYIYGLFELLGISEERVMFID-KIHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRANKRGLGNNAEVRDALIENFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVRDLFVAKRMADEA 768
            +V V+ QE+G  YYH  VE+L RIT+ LD+L++NPDI + +        H  S +   ++  LFEL+GIS ERV+    ++HA+LA+VP  T+CG P+  +V +LR+  LQ ++PDTGGVPP PP+P++VLIVR+N RGL NN EVR+AL  NF   DVVEFFGTDP+R+QL++FATA++I+APHGAGLAN++V+PLHT +LEI P+ECP C++ +A KL HIYARH   D W   C++WY P VD I++L RDL  AKR AD+A
Sbjct:  168 KVFVMAQEWGPNYYHFTVEHLPRITLALDILIDNPDIMIVMRHHGQDKWHDTSTEFETHM-ELFELIGISRERVVDTSHEVHANLAIVPTTTICGDPDPHMVNMLRNRFLQSLFPDTGGVPPVPPRPVIVLIVRSNIRGLENNNEVREALEMNFTSFDVVEFFGTDPVRDQLKIFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGDEWTISCNTWYNPGVDGIIDLARDLLEAKRQADDA 431
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BLAST of mRNA_Ecto-sp13_S_contig6948.17945.1 vs. uniprot
Match: A0A6H5L2R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R1_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 1.810e-91
Identity = 143/263 (54.37%), Postives = 198/263 (75.29%), Query Frame = 1 
Query:   13 LTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAVHSISEKHREYIYGL----------FELLGISEERVMFIDK-IHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRANKRGLGNNAEVRDALIENFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVRDLFVAKRMADEA 768
            +TQE+   YYH  VE+L RIT+ LD+LLENP+IK+A+H  S+  + +  GL          FE+LGIS +RV+   K +HA+LA+VP +T+CG P+A +V +LR+ LLQG++P T GVPP P +P++VL+VR   RGL NN EV++AL  NFP  DVVEFFGTDP+R+QL  FA AS+++APHGAGLAN++V+PLHT +LEI P+ CP+C++ +A+KL HIYARH G + W  +C +WYEP++DE+V+LVRDL  AK  A++A
Sbjct:    1 MTQEWNPNYYHFTVEHLPRITVALDILLENPEIKIAMH-YSQHDKLHKGGLSNEIETHMEMFEILGISRDRVVLAMKQMHAELAIVPTSTMCGDPDAHMVNMLRNRLLQGLFPTTNGVPPAPARPVIVLVVRTTLRGLKNNDEVKEALKINFPSFDVVEFFGTDPVRDQLLTFAKASMVIAPHGAGLANMIVAPLHTPVLEIAPLSCPSCFLRLALKLHHIYARHPGGE-WSQECHTWYEPDIDEVVDLVRDLLEAKGQANDA 261
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BLAST of mRNA_Ecto-sp13_S_contig6948.17945.1 vs. uniprot
Match: A0A6H5JZT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT9_9PHAE)

HSP 1 Score: 304 bits (778), Expect = 3.230e-89
Identity = 146/264 (55.30%), Postives = 195/264 (73.86%), Query Frame = 1 
Query:    1 QVVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAVH-------SISEKHREYIYGLFELLGISEERVMFID-KIHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRANKRGLGNNAEVRDALIENFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVRDLFVAKRMADEA 768
            +V V+TQ++G  YYH  VE+L RIT+ LD+LLEN +I +AVH         +    E   G+FE+LGIS ER++ +  +I+ADL +VP  TVCG P+A +V +LR+  LQG++P T GVPP PP+P++VL+VR   RGL NN EVR+AL  NFP  DVVEFFGTDP+R+QL+ FATA++I+APHGAGLAN+VV+PLHT +LEI PI CP C++ +++KL H+YARH G  +W   C +WY+P+VDEIV L RDL   KR AD+A
Sbjct:  400 KVFVMTQDWGPNYYHFTVEHLPRITLALDILLENSEIMIAVHYHDTDKWHDTSTELEAHMGMFEILGISRERIILVKTRIYADLVIVPTTTVCGDPDAHMVNMLRNRFLQGLFPTTNGVPPAPPRPVIVLVVRTTLRGLKNNDEVREALQINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANVVVAPLHTPVLEIAPIRCPPCFLRLSLKLHHVYARHPGG-KWKKRCQTWYKPDVDEIVTLARDLLEGKRQADDA 662
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6948.17945.1 vs. uniprot
Match: D8LIQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ4_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 4.760e-88
Identity = 143/266 (53.76%), Postives = 190/266 (71.43%), Query Frame = 1 
Query:    1 QVVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAVHSISEKH-------REYIYGLFELLGISEERVMFID-KIHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRANKRGLGNNAEVRDALIENFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVRDLFVAKRMADEAEG 774
            +V V+TQ++G  YYH  VE+L RIT+ LD+LL NPDI +AVH     H        E   G+FE+LGIS ER++ +  +IHADL +VP  TVCG P+A +V +LR+  LQG++P T GVPP PP+P++VL+VR   RGL NN EVR+AL  NFP  DVVEFFGTDP+R+QL+ FA+A++I+APHGAGLAN+VV+PLHT +LEI PI CP C++ +A+KL H+YARH G  +W   C +WY+ +VDEIV L R   +   +A   E 
Sbjct:  228 KVFVMTQDWGPNYYHFTVEHLPRITLALDILLRNPDIMIAVHFHDTDHWHDTSTELEAHMGMFEILGISRERIILVKTRIHADLVIVPTTTVCGDPDAHMVNMLRNRFLQGLFPTTDGVPPAPPRPVIVLVVRTTLRGLKNNEEVREALEMNFPSFDVVEFFGTDPVRDQLKTFASAAMIIAPHGAGLANMVVAPLHTPVLEIAPIRCPPCFLRLALKLHHVYARHPGG-KWTKRCQTWYKTDVDEIVTLARSSLIEIELAATQEA 492
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6948.17945.1 vs. uniprot
Match: A0A6H5L311_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L311_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 3.350e-87
Identity = 146/266 (54.89%), Postives = 195/266 (73.31%), Query Frame = 1 
Query:    1 QVVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAVH---------SISEKHREYIYGLFELLGISEERVMFIDK-IHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRANKRGLGNNAEVRDALIENFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVRDLFVAKRMADEA 768
            +V V+ QE+   YYH   E+L RIT++LD+LL+NPDI +++H         +IS  H E    + E+LGIS ERV+ +D+ +HA+LA++P +TVCG P+  +V +LR+  LQG++P T GVPP PP+P +VL+VR   RGL NN EV++AL  +FP  DVVEFFGTDP+  Q + FATA++IVAPHGAGLANI+V+PLHT +LEI PI CP C++ +A+KL HIYARH G D W  +C SWYEP VDEI+ L RDL  AKR+AD+A
Sbjct:  407 KVFVMAQEWSPNYYHFTAEHLPRITLMLDVLLDNPDIIISMHFYEKDIIHENISAVH-EVQMEMLEILGISRERVVLVDQQMHANLAIIPTSTVCGDPDPHMVNMLRNRFLQGLFPTTNGVPPAPPRPTIVLVVRTTLRGLQNNEEVKEALKISFPSFDVVEFFGTDPVGHQFKTFATAAMIVAPHGAGLANIIVAPLHTPVLEIAPISCPPCFLRLALKLHHIYARHPG-DHWSQECMSWYEPPVDEIIELARDLLEAKRLADDA 670
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6948.17945.1 vs. uniprot
Match: D7FWK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK6_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 2.150e-86
Identity = 144/270 (53.33%), Postives = 197/270 (72.96%), Query Frame = 1 
Query:    1 QVVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAVHSIS-------------EKHREYIYGLFELLGISEERVMFIDK-IHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRANKRGLGNNAEVRDALIENFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCSSWYEPNVDEIVNLVRDLFVAKRMADEA 768
            +V V+TQE+   YYH  VE+L RIT++LD+LLENPDI +A+H                E H E    +FE+LGIS +RV+   K +HA+LA+VP +T+CG P+A +V +LR+  LQ ++P T GVPP   +P++VL+VR   RGL NN EV++AL  NFP  DVVEFFGTDP+++QL  FA AS+++APHGAGLANI+V+PLHT +LEI P+ CP+C++ +A+KL HIYARH G + W  +C +WYEP++DEI++LVRDL  AKR AD+A
Sbjct:  391 KVFVMTQEWNPNYYHFTVEHLPRITLMLDVLLENPDIMIAMHYSQHDKLHQGGFSNEIETHME----MFEILGISRDRVVLAMKQMHAELAIVPTSTICGDPDAHMVNMLRNRFLQSLFPTTNGVPPAQARPVIVLVVRTTLRGLKNNDEVKEALEINFPSFDVVEFFGTDPVQDQLLTFANASMVIAPHGAGLANIIVAPLHTPVLEIAPLSCPSCFLRLALKLHHIYARHPGGE-WSQECHTWYEPDIDEIIDLVRDLLEAKRQADDA 655
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6948.17945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKP0_ECTSI1.260e-17196.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMF5_9PHAE7.250e-14782.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKN9_ECTSI8.330e-9662.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM62_9PHAE1.620e-9258.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWK4_ECTSI4.590e-9254.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2R1_9PHAE1.810e-9154.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZT9_9PHAE3.230e-8955.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ4_ECTSI4.760e-8853.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L311_9PHAE3.350e-8754.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWK6_ECTSI2.150e-8653.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6948contigEcto-sp13_S_contig6948:1..6641 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score460.3
Seed ortholog evalue5.3e-127
Seed eggNOG ortholog2880.D7FKP0
Model size2291
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Protein of unknown function (DUF563)
EggNOG OGs2E14A@1,2S8GN@2759
Cds size696
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6948.17945.1prot_Ecto-sp13_S_contig6948.17945.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6948 88..5133 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463953.8721013-UTR-Ecto-sp13_S_contig6948:0..871681463953.8721013-UTR-Ecto-sp13_S_contig6948:0..87Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6948 1..87 +
1681463953.9746478-UTR-Ecto-sp13_S_contig6948:5133..66411681463953.9746478-UTR-Ecto-sp13_S_contig6948:5133..6641Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6948 5134..6641 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463953.894254-CDS-Ecto-sp13_S_contig6948:87..1141681463953.894254-CDS-Ecto-sp13_S_contig6948:87..114Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6948 88..114 +
1681463953.9062731-CDS-Ecto-sp13_S_contig6948:483..5821681463953.9062731-CDS-Ecto-sp13_S_contig6948:483..582Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6948 484..582 +
1681463953.9151225-CDS-Ecto-sp13_S_contig6948:1427..15201681463953.9151225-CDS-Ecto-sp13_S_contig6948:1427..1520Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6948 1428..1520 +
1681463953.9322982-CDS-Ecto-sp13_S_contig6948:2527..26291681463953.9322982-CDS-Ecto-sp13_S_contig6948:2527..2629Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6948 2528..2629 +
1681463953.9456608-CDS-Ecto-sp13_S_contig6948:3291..35131681463953.9456608-CDS-Ecto-sp13_S_contig6948:3291..3513Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6948 3292..3513 +
1681463953.9551961-CDS-Ecto-sp13_S_contig6948:4014..41151681463953.9551961-CDS-Ecto-sp13_S_contig6948:4014..4115Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6948 4015..4115 +
1681463953.9642982-CDS-Ecto-sp13_S_contig6948:5081..51331681463953.9642982-CDS-Ecto-sp13_S_contig6948:5081..5133Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6948 5082..5133 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6948.17945.1

>prot_Ecto-sp13_S_contig6948.17945.1 ID=prot_Ecto-sp13_S_contig6948.17945.1|Name=mRNA_Ecto-sp13_S_contig6948.17945.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=232bp
MLLENPDIKVAVHSISEKHREYIYGLFELLGISEERVMFIDKIHADLALV
PPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRANKR
GLGNNAEVRDALIENFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAG
LANIVVSPLHTMILEIGPIECPTCYVNMAIKLQHIYARHAGSDRWDDDCS
SWYEPNVDEIVNLVRDLFVAKRMADEAEGRD*
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mRNA from alignment at Ecto-sp13_S_contig6948:1..6641+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6948.17945.1 ID=mRNA_Ecto-sp13_S_contig6948.17945.1|Name=mRNA_Ecto-sp13_S_contig6948.17945.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6641bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6948:1..6641+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGGTTGTGCTGACACAGGAGTACGGGCTAGCGTACTACCATCTCCT
GGTGGAGAACCTGTCGCGAATCACCATCGTTCTGGACATGCTTCTGGAAA
ATCCCGACATCAAGGTGGCACAATTCTTATTCCTTGTGTTCCGGGCGGGT
ACATACGCATACGGCCAGCTTTATGATGACCCCATGCCCTCGACATGCTG
CTTGGTGATCTCCTGTTCTCGACCCCTCATCTTCACCGTAGTGAAATATG
CCAAGGTGGAACTTCTCAGTTTCTTATAAGTGGGGGGGTATGTATGTAAA
CGGTCTGCTCCGTGAAGGGGCACTCCCGTATGCGTATGTTTGACAGCAAT
CCCTTGTCGGCGCTCCCCTCGCACAGTGGCGAGATATGTCTCTCTCTTTC
TCTCTAGTTCTCTTTGTCTCTCCCACACATTTCGTTCACACCCCGAAAAA
CGCACCTGTTTTGTCCGACGGCGTCGTGCGAAGGTGGCGGTTCATTCGAT
ATCCGAAAAGCACAGGGAGTACATATACGGGCTCTTCGAACTCCTCGGCA
TCTCGGAAGAGCGCGTAATGTTTATCGACAAGGTGAGCGTGGTGTGTTTT
TTTTGTTTGCTGGCCCTTGACATTTCTCCAGAAGCAACAAAGACTTGGTG
TCAGTTTTTTCTCGTCGCGTTTACACGTCGAGAAGCTGGAGGGGAGGTAC
CTTGCGCTGCTTCGAATTGCCCGTTCGCTCCTCACTACTGTTGTCCGCCA
GCTCCGGCTCGGGGGGTGATACATCTTCTCGCCGATTTATTCGACGGCGC
AGCAAAAAGAAAACGGCTCTTCCGTAGAAACGGCACTCCCTTGGCCAAGC
TCTCATCGCGTCGCATCTGACATTGGAAAAAGTAGTGGGGAGAAATGATT
TTGGCATTCTGGAGAGAGCAGGGACGGGTGTTTTGTTTGGTTACGGGGTA
CGCGCGACTTGTAGACTAATCCTCATCAAGCGGGGGGTCGGGAAACCCCA
CGGAACATGCTTCTTGTGTTAGTACTGCTGTGCGGGCGGATCGCCCATTT
TACGGCGTTTTCAGAGGCGGAGTAATGTGGCCGCGGAATAGCTTGACGGC
CCGAATCAAATGGAAGAACACGTGTGCGTAACTGCGAAACTGTCGTCATT
TTCTTGGTTTGCTTTCTCGTCGATATGTTCCACACGGCGTGACGAAGGTC
TTATGAAGCAGATGTCGCCCGTATCAACCTGGCCTCGGTAAAAGCGATGC
GCTCTCGTGCGTCTTGGGTAGCAGCAAAACCCTTCGAATCACCGTAGCTG
CTTTGATGACTACCCTATTTGCCGGAAGCCAAACGCTTTTCTTGGCTTAC
CATTTGTCGAAACCGCCTGTCGTCTCGGGGCTGTTTGTTGCGTTTCGTGG
GTTAAATTATTTTTTGTAACGTTTCAGATTCATGCGGACCTAGCGCTCGT
GCCGCCTGCGACAGTGTGTGGCAAGCCCAACGCCGTACTGGTGACTCTGC
TGAGACACGCCCTTCTGCAGGTAGGTGGCGAGAGGCGTGTATGGTCGGGT
TCCCCGTGTGGTCACTGGTGTTGCATGTTGGAAGGTCTATGGGGACTCGG
GGCTCCGTGGCATCAATATATAGCGGTATACATCTCTGTGGTTGGTGATC
GATAATTCGGGTGCTCGGTTCTTCGTGGTTGGAGCTTGAAGCGGGTGGCT
CATGGCGGAGCGTGGATGGGTAGAAACGTGTTGTCTCGTGTTGCAAAAGT
ATTGTGTTCATCGGGGGCGTGCCAGTGCTCGTCAAACCATCACGGCGTCT
GGTCACGCCTTCACTCTTTTTCACTCAACGAATCTCTCTGAACCTTCACC
AAATACCTCTCGCAACCAAGGAATATATGTAGAAAGTCCCCATTCTTGCG
CATCTCATCACTGTAACTTTCGTACTTACGTACATAACATCTCAACCGTC
ATACTATGCTACGAGTACCCCCAATATATCTAATAGTTGGATGGTATTCG
GGATTCTGTTTGTATGGCGCTCGTGTGTAACCCTCTACATACGTCTATTT
CGAAGGATAGTAAGAGGACTTTTTGTGGGTGATGACTCAAGCCTTCCATC
AGTCCCTCCTTCGGGGATGGAGTCCTGATGGATACGGATCAAATGTCAAT
CGTGGCAGCATTGCTGTTTGTGCTTGCTTACGCCGACTCACAGTGGTATC
GGAACATGCAGCGCACAGCATGTAGTTGGCAGCGGGGCTTAGGGTGCTTT
TCAAGGGCGGCTGACAGCTGTTTTGGAGACATGCAGGGGAAGGTCTTACT
TTTTTTCTGTATTCTCTAGCGGCAAGGTCTCCGATCTCCTCGATGTGCTG
CACAAGAAAGGCGAGCGTGTTAGGGAGCCTTCCTGCAGTGTTTTTCGAGT
GTGTTTCGTCTCTGTTACGTGCAATGGGCCCGCTGTTTGTCATGTGTTAC
TGCGATCACCACCTCCACCCGCCGCGACCTCCTTAATCGGTTGTTCTGTT
GACGTTCTTCCCGGAACGTTTCCCCAGGGGATGTACCCGGACACAGGAGG
CGTGCCGCCTACTCCTCCGAAGCCGATCATGGTGCTAATCGTGCGAGCGA
ACAAACGAGGCCTCGGAAACAACGCCGAGGTATGTGTGCGCCTTCAAGTC
TGCTTGTGCTAGTAGTCATGTGTGACGACGAGCGCTTGCCGTCTCAGGCA
AGTAGTGAGTGCGGTACGGAAGTGGTTGTTTGGGCTGGACAGGCGTGTTG
CCCGACCCGCCTACTATCTACATACTCCCGTTCGTCTTTGGCGGCGTAAA
AGTGGTGTTGCAATGGGTTTGCATTTCTTGGTCGTCGCGAGGCGAGGAAA
CCAACATTTTCCCCGTGTGTATCCTTTCGGACCTTGCCATTGTCAACGGC
GAATTCATTCCAGAGGCTGAGGTGTTCCTCAGTGCCACATCGTACTCCTT
GTGTAAGCAGTCTGTCACGCCGGTATTGTGATGGCAGCACTGCTGTTTCG
GTAATATCGCCGAAATGCGGGAGAATCACGCTTACTTCCCCACCGTCCTC
GTCACTTTTTTTCCATTCATGTGTACCTTCAAACAAAAGCACACGCACAT
GTCTTTCATCCGCAGAATAGCTCAGCCTCCCCCATGCCGCCCCCTCACGA
AGTCCCAGTTCATGCCATTTACAAGTGTTTTTTTTTGTTTCAACCACACC
GAGACTGACGTCTTGTCATTGGTCAACCGGTTAGCGTGGTCGATGCTAAC
AATCACTATTAATACACACACACACGCACGCACGCACGCAGGTTCGAGAT
GCCCTTATCGAGAACTTTCCCGACCACGACGTGGTTGAGTTCTTCGGCAC
TGACCCAATCCGAGAGCAGCTTGAACTTTTCGCCACAGCGTCCGTCATAG
TGGCCCCCCACGGGGCCGGGCTTGCTAACATCGTTGTGTCGCCGCTCCAC
ACCATGATCCTCGAGATCGGTCCCATCGAGTGCCCGACGTGCTACGTTAA
CATGGCGATCAAGGTGGGTGATGCGGTTGCTGATCCGGTTCGGTGATGTC
GGTCCCGAGCACCGATGGTTGGTTGTTGGTATTTGCGTCCAGCCGGACGC
TACGGTCGGCGTTTGTAGGTCGTGTGCCTTGTTGTACAGGATGAGTCGGC
TTTTGGACCAGGCTGTTGTCGGTGGTTGGTTGGCAATACGAAGACCGGGT
GCACTGCTGTGTGCTGGAACGCGTCCATCGCCGTTACTTCATTTTTGATT
TGGGCAATGCTTGTGTCTCAACCTTGAGCACGGGCGATGGATTTATTCCA
CCGTACAGTTGTGGTGCTCCGCCGTTGGGACAAACGAGCGGGTTAGCGCG
AAGGTCGGGCGTCGAAGGTTGCTGTCTGTTTAGTACGGAATTTGTCAAGG
GTCGTCGGGTTTGCGTCGCATCGAACCTCGAGAAACTCGCCGTGTGGCCC
GCTGAACCTCATTTGGGGTTTGGCCCCGTGTCGGCGGAACGCTTTGCCCA
CTTGCGTTCGACAGCTTCAGCACATCTACGCCAGGCACGCCGGGAGCGAC
CGCTGGGACGACGACTGCAGTTCTTGGTATGAACCAAACGTCGACGAAAT
CGTCAACCTAGTTAGGTGAGAACTAAGGCAGAGGCGAAGATAAGGCCCGT
TACGTACCTGTCAGGTGCTCCCCCTTATCGCATAGACGTTCAGTTGGTGC
ATTAGTCACCTTCCACGTTTTGAGGTCGTTCGGGTCTTGAAGTCTTGTGC
TTTTGCAATTGTTTCTGGAGCAAAGAATGTGTACACATGTAAGTGTCCCG
TACATGTGCTGCGGTAGATGCGGTGGAAAGTCCAAGCCCGTTTTTCCGCG
AGTAAAAACAAGCGTGTACCCGTGTCATCAGCAGAAGAGCTCATGAGCGT
TGCATACCCTCCACAGCGAATTTTTTTTGCACGGCGGATGGGTGCATCGA
CCAATACCTCGTTCGCTAGGGGGTCTCCTTTTATTTTTCCTTCAGTTTTG
ATAACGCCGTATGTATGTCATATACCGACAGGAGGACCACGCACTCTCAC
TTGTGTTTCGGCCCGACACACTTGCGCCTGGCGCAGCGACATGGTTGTGC
GCTTTTGCTCTGCTCTCGACATGGACGCACTCATCCTGCAATGTTTTTTG
CTCCGCAATTTTGTGTTTCGATCGAACTCTCCGTGCGTCGGTGGTTGACT
TTTGACGACTGCCGCCCTGTTCGTGAAGCCGATGTCTTTTCCCGAACTTT
CCCGAACGCCTCTTATTTTTCTTAAATCTCTCTTACGTCGTAACGTTTTG
TAGCACTTCCAAGTGCTTTGCTCTGTCCCTTCCCCGAACTGACCAACTAC
TTGCAATCTTCGAGCTGAGGTACTCTCGGGTACACACTGGACGACCAGTT
GCTGCACCGTTTTGCGCGAAACACCCTTTTTATTTTCACCCATGTGTAAT
CTTAATATTTGCATCTACCGCGCGAAGCGGCTGACCAATGAAAAGACGTC
AGTCTCATTGCGGTTAAAAACACGAACACTTCTAAATGTCCTTAATTGTG
TGTGTGTTTGTTGCTCTTCGCGTGTTCTAAGGGACCTCTTCGTGGCGAAA
CGCATGGCCGATGAGGCGGAAGGCCGCGACTAAGAGGTGTGCTGGACGCA
ATTGTGCCGACGGAAGCCTACGTACGTGGTGCAGGTTGTCGTTCCGTGGT
GTGGCTAACGTGCCAGATTGTGCTTTACGTTTTAGTCGTTGTTCCTCGGA
AGCGTAGAAGTCGGGTTGTGGTTTAGAAGCAGGCGGAACTTCGAGGTGTA
TCCTGCGTGATGTAGGCGAACGCCTTGTGTAGTTCGACTTTTTTCTGTTT
TTGTGTATTCGGCTCAGTGGGTGTTTCGTCGTTATAATTTTGTTGTCAAG
GGTAAGGAAGTAGTTGGATTTGTCAAAAACTCCTCGTTCGTTGTGACATC
TACTTTAGCAGGACACTTTTTTGTCTCGACCCCATTGACGATCCTTCCGA
ACAGTTTCTCAGTCGCATGAACTCATTCGTTTACGCTCCCTTGCAGAGCG
TTTTGGTGTCATTGGTGCTAGCATGAATGGGTCAGCCCGAGCATGCTTAT
AGCGAAATTCCTTGTATATGATATTGGAGCATGCACAACAATATATTTTG
TGCGTTGGGACGTATTAGTATCTTGCCTCGTCATCAGCTCATTTTTTTTT
TTGAGTGGCAACCGCAGTCATTCCCCCCCAGAGTTACAATTGTGTGGACG
AAAGTTCGCGTGTTGACCTTTTTGGGGTGTCAGTTCTATTTCAAAGATTC
TTTTTCGTGTGGACGAAAGTTCGCGTATTGACCTTTTTGGGGAGTCGGTT
CTATTTCAAAGATTCATTTTCGAAGGCCTGTTGCCGCCGGTTCCTCTACA
GCAGCACTACTGCGGATATTTCGTATGCTTTTTGCCGCCTCCTAGCAATT
CTTTGTGAACGCCGTGTTTTGGACTTGTGTTGGTATTTGTTGTGGTGTGC
GGTCGGGGTCTTTGTTGTCTGAATTTTTGTTTGAAGTATTTTTCAGTACC
TCATTCGAGGGTGTTTCTGTACGTGTATAGGGTATGGCGAGAAAATGAAA
AGGTTTCACCGCTTCACTCGCCTTTCGTCCCCGTATCGCCGACAGCACCG
GCCCGATCTTAAGAACCATCAAATTTGAAATTTTGGCTCAGCCTGACCTC
GTGTGGGATGAGGGTCGAGCGTCGGTTGTGTTGTAGGAGCCAATGATGAC
CTGGTCCACAAGCTGCCCGTCCGCTAGTACTTGCGCAACGTCCTACATAT
CGTTCCCTGCCTTCTCATATGTGGTGGAGATCATTGCTTCAAACGCAACC
TTGCTTCCTTTTGTGTCAAGTTCGCCCGCACTTCCTCCGTCTGAGACTTT
GACAGCTAGGAGTGGTCCCGGAGATGCTGTATTTGTTCTTGCCGTCGTAT
TGTCGGCAGCAACGTGTTCGTCAAGCTGATTTCACGAGGCTGGATCGGAC
ACAAAAAGAACGAGACGAACTCCACACCCCCAAAATACTGTTGTTGGGTC
TGGTCCTCAACCAGGGCGAAAGTATGTCGTGCTGTTTTGTGAACTGGGTC
AAGAGGGCCAAGAGCACTTCCTCCCTGCTTCAGAAGAATCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6948:1..6641+

>mRNA_Ecto-sp13_S_contig6948.17945.1 ID=mRNA_Ecto-sp13_S_contig6948.17945.1|Name=mRNA_Ecto-sp13_S_contig6948.17945.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=696bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6948:1..6641+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTCTGGAAAATCCCGACATCAAGGTGGCGGTTCATTCGATATCCGA
AAAGCACAGGGAGTACATATACGGGCTCTTCGAACTCCTCGGCATCTCGG
AAGAGCGCGTAATGTTTATCGACAAGATTCATGCGGACCTAGCGCTCGTG
CCGCCTGCGACAGTGTGTGGCAAGCCCAACGCCGTACTGGTGACTCTGCT
GAGACACGCCCTTCTGCAGGGGATGTACCCGGACACAGGAGGCGTGCCGC
CTACTCCTCCGAAGCCGATCATGGTGCTAATCGTGCGAGCGAACAAACGA
GGCCTCGGAAACAACGCCGAGGTTCGAGATGCCCTTATCGAGAACTTTCC
CGACCACGACGTGGTTGAGTTCTTCGGCACTGACCCAATCCGAGAGCAGC
TTGAACTTTTCGCCACAGCGTCCGTCATAGTGGCCCCCCACGGGGCCGGG
CTTGCTAACATCGTTGTGTCGCCGCTCCACACCATGATCCTCGAGATCGG
TCCCATCGAGTGCCCGACGTGCTACGTTAACATGGCGATCAAGCTTCAGC
ACATCTACGCCAGGCACGCCGGGAGCGACCGCTGGGACGACGACTGCAGT
TCTTGGTATGAACCAAACGTCGACGAAATCGTCAACCTAGTTAGGGACCT
CTTCGTGGCGAAACGCATGGCCGATGAGGCGGAAGGCCGCGACTAA
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