mRNA_Ecto-sp13_S_contig6946.17943.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6946.17943.1
Unique NamemRNA_Ecto-sp13_S_contig6946.17943.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6946.17943.1 vs. uniprot
Match: A0A6H5KTE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE2_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 1.640e-99
Identity = 234/299 (78.26%), Postives = 239/299 (79.93%), Query Frame = 3 
Query:    3 DREKSMSPLDKDQLKRRCLERVRTERSRLMARMRGRKGAEEEARQLSSHAGGDSGSPPTAAAGQEENLSSPGQHSLSSAREILRQGLSELSGGNGDINKRRRPQHHPRNHERTALGYEDFGASPVRLDSNGXXXXXXXXXXXXXXXXXXXXXXX-----FLSAIEEENASYLNACARGQGDSLRQRGPRDGTAADLAPMSTSLREQTQGFVEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---EENLLSPDEYLEMMQYIEEACKEEDLRAEAA 875
            DREKSMSPLDKDQLKRRCLERVRTERSRLMARMRGRKG EEEARQL  HAGG+SGSP TAAA Q ENLSSPG HSLSSAREILR+GLSELSGGNGD NKRRR QHHP NHERTALG E+FGAS  RLDSNGXXXXXXXXXXXXXXXXXXX         FLSAIEEENASYLNACARGQG SL+QRGPRDGTAA+LAPMS S REQTQGFVEGN                XXXXXXXXXXXXXXXXXX                D   EENLLSPDEYLEMMQYIEEACKEEDLRAEAA
Sbjct:   16 DREKSMSPLDKDQLKRRCLERVRTERSRLMARMRGRKGTEEEARQLFGHAGGNSGSPLTAAAAQGENLSSPGHHSLSSAREILREGLSELSGGNGDTNKRRRQQHHPTNHERTALGCEEFGASLTRLDSNGXXXXXXXXXXXXXXXXXXXHAGGSESLSFLSAIEEENASYLNACARGQGGSLQQRGPRDGTAAELAPMSISFREQTQGFVEGNNDEDDALMAHDDGHAQXXXXXXXXXXXXXXXXXXMVDEDELGWGDGGGAEDCCDEENLLSPDEYLEMMQYIEEACKEEDLRAEAA 314
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BLAST of mRNA_Ecto-sp13_S_contig6946.17943.1 vs. uniprot
Match: D8LF43_ECTSI (RPA_interact_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF43_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 4.210e-97
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 3 
Query:  780 DEENLLSPDEYLEMMQYIEEACKEEDLRAEAAVLEDYELTRRLEEEEVEYAVASLDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEHFKQQLADTYSEHSTACSAEPSFVVEGAPGFDVLWSSCDGCGFARVVL 1238
            DEE+LLSPDEYLEMMQYIEEACKEED RAEAAVLEDYELTRRLEEEEVEYAVASLDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEHFKQQLADTYSEHSTACSAEPSFVVEGAPGFDVLWSSCDGCGFARVVL
Sbjct:   20 DEEHLLSPDEYLEMMQYIEEACKEEDFRAEAAVLEDYELTRRLEEEEVEYAVASLDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEHFKQQLADTYSEHSTACSAEPSFVVEGAPGFDVLWSSCDGCGFARVVL 172
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BLAST of mRNA_Ecto-sp13_S_contig6946.17943.1 vs. uniprot
Match: A0A835YX80_9STRA (Replication protein A interacting C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX80_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.030e-19
Identity = 58/155 (37.42%), Postives = 84/155 (54.19%), Query Frame = 3 
Query:  795 LSPDEYLEMMQYIEEACKEEDLRAEAAVLEDYELTRRLEEEE------VEYAVASLDDINGNG-QDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEHFKQQLADTYSEHSTACSAEPSFVVEGAPGFDVLWSSCDGCGFARVVL 1238
            L+P+EY +MM +IE+A   E  RA+A+                        A A+ +  +G G +DD VLCPVCK  +LL  G   A+I+C CGFRL T G+ + L   +Q LA+ +++H   C  +P+F V    G  +LWS C  CGF ++VL
Sbjct:    5 LTPEEYTDMMLFIEQALAAELARADASXXXXXXXXXXXXXXXXXXXXXAALARAAAEAEDGRGWRDDEVLCPVCKGGWLLQHG---ATIMCTCGFRLQTDGEGMQLGVLRQALAEVFTDHRERCHLQPTFRVREEFGAAMLWSECSACGFEQIVL 156
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BLAST of mRNA_Ecto-sp13_S_contig6946.17943.1 vs. uniprot
Match: A0A7S0VBY7_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VBY7_9CRYP)

HSP 1 Score: 65.5 bits (158), Expect = 1.500e-8
Identity = 47/155 (30.32%), Postives = 74/155 (47.74%), Query Frame = 3 
Query:  783 EENLLSPDEYLEMMQYIEEACKEEDLRAEAAVLEDYELTRRLEEEEVEYAVASLDDINGNGQDDAVLCPVCKRDYL-LHPGPPSASIVCACGFRLDTGGDRLGLEHFKQQLADTYSEH-STACSAEPSFVVEGAPG-FDVLWSSCDGCGFARVVL 1238
            EE+ LS +EY+ +MQY+EEA   E  + E  ++         ++E  E    +     G+     V CPVC RD L  H       + C CG RL    +++ L   +  L D ++ H S+ C+ +P   ++  PG  D+L  +C  C F  VV+
Sbjct:   31 EEDGLSEEEYIGLMQYLEEAVVTELRKQEQEII----AQELFDQERAESNALAASHAEGH----RVTCPVCMRDTLHSHRNV----VFCGCGMRLSCQTEQVSLVQLESMLLDRFAAHTSSGCANQPVCSIQTVPGGVDMLMMACAACDFMDVVV 173
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BLAST of mRNA_Ecto-sp13_S_contig6946.17943.1 vs. uniprot
Match: D8R075_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R075_SELML)

HSP 1 Score: 62.8 bits (151), Expect = 3.620e-7
Identity = 52/157 (33.12%), Postives = 78/157 (49.68%), Query Frame = 3 
Query:  795 LSPDEY----LEMMQYIEEACKEEDLRAEAAVLEDYELTRRLEEEEVEYAVASLDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDR----LGLEHFKQQLADTYSEH-STACSAEPSFVVEGAPGFDVLWSSCDGCGFARVVL 1238
            LSP EY    L M   + +    E  +     LEDYE    LE+     ++ASL  +  N Q++ VLCP+C+R +LL       SI C+    LD G  R    +G+E  + +LA+   +H S+ CS++P F  +    F  L+  C+ C F  VV+
Sbjct:   87 LSPQEYEDLMLAMQAVLYQGTYPEQQQHAIDDLEDYEKATALEDS----SLASL--LEQNHQENGVLCPLCRRGFLLDK---ENSIRCSSNGCLDLGSQRDKLKVGVEFVRIRLAELMDQHYSSGCSSQPVFTFKDE--FQSLFILCNSCDFFEVVV 232
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BLAST of mRNA_Ecto-sp13_S_contig6946.17943.1 vs. uniprot
Match: UPI000D1C7D68 (uncharacterized protein LOC9653983 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C7D68)

HSP 1 Score: 62.4 bits (150), Expect = 1.110e-6
Identity = 44/125 (35.20%), Postives = 67/125 (53.60%), Query Frame = 3 
Query:  879 LEDYELTRRLEEEEVEYAVASLDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDR----LGLEHFKQQLADTYSEH-STACSAEPSFVVEGAPGFDVLWSSCDGCGFARVVL 1238
            LEDYE    LE+     ++ASL  +  N Q++ VLCP+C+R +LL       SI C+    LD G  R    +G+E  + +LA+   +H S+ CS++P F  +    F  L+  C+ C F  VV+
Sbjct:  190 LEDYEKATALEDS----SLASL--LEQNHQENGVLCPLCRRGFLLDK---ENSIRCSSNGCLDLGSQRDKLKVGVEFVRIRLAELMDQHYSSGCSSQPVFTFKDE--FQSLFILCNSCDFFEVVV 303
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6946.17943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KTE2_9PHAE1.640e-9978.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF43_ECTSI4.210e-9798.69RPA_interact_C domain-containing protein n=1 Tax=E... [more]
A0A835YX80_9STRA1.030e-1937.42Replication protein A interacting C-terminal-domai... [more]
A0A7S0VBY7_9CRYP1.500e-830.32Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
D8R075_SELML3.620e-733.12Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
UPI000D1C7D681.110e-635.20uncharacterized protein LOC9653983 n=1 Tax=Selagin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6946contigEcto-sp13_S_contig6946:3416..7379 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeMetazoa
Stop1
Start1
Seed ortholog score81.6
Seed ortholog evalue9.1e-13
Seed eggNOG ortholog7739.XP_002598832.1
Preferred nameRPAIN
Model size2639
Hectar predicted targeting categoryother localisation
GOsGO:0001650,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006606,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0015031,GO:0015833,GO:0016604,GO:0016605,GO:0017038,GO:0031974,GO:0031981,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0044877,GO:0045184,GO:0046483,GO:0046907,GO:0050896,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0090304,GO:1901360,GO:1901576
Exons4
EggNOG free text desc.protein import into nucleus
EggNOG OGs2C8FC@1,2R0QT@2759,39SXM@33154,3BKGT@33208,3CTDP@33213,481DD@7711
Ec32 ortholog descriptionRPA-interacting protein
Ec32 orthologEc-06_001600.1
Cds size1224
COG Functional cat.S
Best tax levelChordata
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6946.17943.1prot_Ecto-sp13_S_contig6946.17943.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6946 4814..7362 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463953.7244382-UTR-Ecto-sp13_S_contig6946:3415..48131681463953.7244382-UTR-Ecto-sp13_S_contig6946:3415..4813Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6946 3416..4813 -
1681463953.7742796-UTR-Ecto-sp13_S_contig6946:7362..73791681463953.7742796-UTR-Ecto-sp13_S_contig6946:7362..7379Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6946 7363..7379 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463953.7357764-CDS-Ecto-sp13_S_contig6946:4813..49191681463953.7357764-CDS-Ecto-sp13_S_contig6946:4813..4919Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6946 4814..4919 -
1681463953.7447715-CDS-Ecto-sp13_S_contig6946:5322..54891681463953.7447715-CDS-Ecto-sp13_S_contig6946:5322..5489Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6946 5323..5489 -
1681463953.7541163-CDS-Ecto-sp13_S_contig6946:5955..60481681463953.7541163-CDS-Ecto-sp13_S_contig6946:5955..6048Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6946 5956..6048 -
1681463953.7641804-CDS-Ecto-sp13_S_contig6946:6504..73621681463953.7641804-CDS-Ecto-sp13_S_contig6946:6504..7362Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6946 6505..7362 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6946.17943.1

>prot_Ecto-sp13_S_contig6946.17943.1 ID=prot_Ecto-sp13_S_contig6946.17943.1|Name=mRNA_Ecto-sp13_S_contig6946.17943.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=408bp
MSPLDKDQLKRRCLERVRTERSRLMARMRGRKGAEEEARQLSSHAGGDSG
SPPTAAAGQEENLSSPGQHSLSSAREILRQGLSELSGGNGDINKRRRPQH
HPRNHERTALGYEDFGASPVRLDSNGGGRQQQQQPQQQQQHAGGSESSSF
LSAIEEENASYLNACARGQGDSLRQRGPRDGTAADLAPMSTSLREQTQGF
VEGNNDDDDALMAHDGGDAQQPRQPQQQQQQQPEAMVDEDEVGWGDGGGA
EDCCDEENLLSPDEYLEMMQYIEEACKEEDLRAEAAVLEDYELTRRLEEE
EVEYAVASLDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLD
TGGDRLGLEHFKQQLADTYSEHSTACSAEPSFVVEGAPGFDVLWSSCDGC
GFARVVL*
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mRNA from alignment at Ecto-sp13_S_contig6946:3416..7379-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6946.17943.1 ID=mRNA_Ecto-sp13_S_contig6946.17943.1|Name=mRNA_Ecto-sp13_S_contig6946.17943.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3964bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6946:3416..7379- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGACAGAGAAAAGAGCATGTCCCCGCTCGACAAAGACCAGCTCAAGCGG
AGGTGCCTCGAGAGGGTTCGCACCGAACGCAGCCGCCTCATGGCACGGAT
GCGAGGCCGGAAGGGCGCGGAGGAAGAAGCACGGCAGCTCTCCAGCCACG
CTGGTGGGGACTCCGGTTCCCCGCCCACGGCCGCAGCGGGGCAGGAAGAA
AACCTGTCCTCTCCGGGGCAGCACTCGCTGTCCTCCGCCAGGGAAATCCT
ACGGCAAGGCTTGAGCGAGCTGTCGGGCGGAAATGGTGACATCAACAAGC
GACGCCGCCCGCAGCATCACCCCAGGAATCACGAGCGAACAGCGCTAGGT
TACGAAGACTTTGGAGCGAGTCCTGTACGGTTAGACAGCAACGGCGGAGG
GAGACAGCAACAGCAGCAGCCGCAGCAGCAGCAGCAGCATGCCGGGGGGA
GCGAATCGTCGTCGTTCCTCTCGGCAATCGAGGAGGAGAACGCCAGCTAC
CTCAACGCCTGCGCGCGTGGGCAGGGGGACTCTCTGCGACAGCGCGGGCC
ACGGGATGGCACCGCGGCTGACCTGGCACCGATGTCGACAAGCCTCCGGG
AACAAACCCAAGGGTTTGTGGAAGGGAACAACGATGATGATGACGCGCTT
ATGGCCCATGATGGCGGCGACGCACAACAACCTCGGCAGCCGCAGCAGCA
GCAGCAGCAGCAACCCGAGGCGATGGTGGACGAGGACGAGGTGGGGTGGG
GTGACGGCGGCGGGGCGGAGGACTGCTGCGACGAGGAGAACCTGCTCTCG
CCCGACGAGTACCTGGAGATGATGCAGTACATTGAGGAGGCTTGCAAGGA
GGAAGACCTCAGGGCCGAGGCGGCGGTGAGTCTTTCCGCCTGCAGCCTCT
TTGGAACATCTGTTAACTCTGCAGCCATGAAGGACTAGGACTGATGTGCG
CCCGCAGGGATGCCTGCACTTCGGATCATGGTCAACAGGTGGATGAGCTG
GGTCATTTGGCTGATGTGCTACTCCATAGATAATAGACTTCCCAAGACAA
GCTGCGGTATACTACGCGTTCGAGATACTTCCCAGAAAGCATGCGTTGAA
TTCTAACAACGGTGAGGATTAATTGCACCTGCGGGAGACTGAACTTGGTT
GACTTTGTTGAAGGTCCTTACACTATCTCAAGACGATTGTCAGCACTTTG
GGCCTTATTGTAGTAGGCAACGTAGAGGTTAATAACGGCGACAGGAATAA
TGCAGCACGTTTGATCGTGATAACTTTGTCCTCCAATTTGCCGTCCGTCC
CGCTTGTTCCGTCGAATCTGGCAAAACTCAGGTTCTCGAGGACTACGAAC
TTACGAGACGCTTGGAGGAGGAGGAGGTGGAGTATGCGGTAGCGAGTCTT
GATGATATCAACGGTAATGGTCAGGTGGGCACCATTTTGAAAGTACTCGC
GCGAAAGACGGAGGAATTTTATATTTTGACCACGAGTACTGTAGAAACGC
TGCAGCAGTTCCACGCCGAACCAACGAGAGTTGGATAGTTGCCGGTTTTA
GCGGGAGATTTTAGACACAGTGGATGGTGTGTAAGGTGACCAGTGTGCTC
CTGTTGTACGATAAAGCATAGGGAAACATACGAGCGAACCCGCTCGCTCG
CTCAAAGACTCATCGCTCACTCCTGCAGTGATGCGGATACCTCCGGAACT
TCGTTGCTACTGCCATGCGTATCGTGTTCCTCTGAGAGTACCAAGGCCTC
GCCTCGATCGGCTTTGTTAGCCGTGTGATCCTTCCAATCTAAATATCTCT
CAGCGCTCATTTCTTCGCGAGCAATATCATGCGCATGGGCGGGGATCAAA
CGTAGTCGCACGCATAACCTCCGTCTTAACCTTGACCCAGGATGACGCGG
TTCTGTGCCCCGTCTGCAAGCGCGACTACCTTCTCCACCCCGGCCCGCCT
TCGGCTTCCATCGTCTGCGCTTGCGGCTTCCGCCTAGACACGGGTGGAGA
TCGCCTCGGCCTTGAGCACTTCAAGCAGCAGCTGGCGGATACCTACAGCG
AGCATAGGCGAGCAAGCTGATTGGTCGGATTTGTTCTTCTGTGTTCGGTG
GCTAATGCCGTCTTGTGGCCTTTTTTCGGTGGTCTTCTCTTTTACCCTTC
GGCGTTGAGTACCGCCTTCGAATTGTAACCATTTTTTAATGTTTCGAACT
CGGCGTTGTGAACGATGTCATGCTGATTTTTATATTTCGTGAATCCCTTA
CTGCTTATGGGTTTGGATTTTCAGGACACGACGACCATCACGTCGCGTCC
TTGTCACGGCCGATCTCCAAACCTCAAGTCACGGGTCATGTGACACGTCA
TTCTGCTGCGCGTACGCAGATGATTTCTGTCCCCACTCCATGCCCATGTA
TATATAGCGTAACCTGTTCGTGCTCTTCTTCGTGTCTCCTGCCTTGCTTG
CCCCCCACAGCACCGCTTGCAGCGCCGAGCCTAGCTTTGTGGTAGAGGGC
GCGCCTGGCTTCGACGTCCTTTGGAGCTCGTGCGACGGATGCGGCTTCGC
CAGGGTCGTCCTCTGACTTAGCCGAGCCGCCTGCTGCTGCTGTCGACCGT
GTTTACCCCCCTCCTGTACATATTGTTTTATCGCCCGCGGTATCAAGCCT
TTCGTCCAATTTTTCTATCTCACAGTAGCTGGTTATTTTGAAGAGGAAAG
GAAGGCAGCCTCGGTCCTCTACGTGGGATGGTGGCTGTTGGTCCTTCGAA
GCTCCTTGTGCGCTGGGCCCGAGGTGCGGCGGGTTTTGTGCGTGTGTACG
GTGGGGCAGCTTGTCTCTCAGACGCTGAACGAGGGGTTAGGTCGTTAGCG
TGTGCGAGTAGGGCATGAGTGATGCATTCGGTTACACCGAACTCTCCATG
TCCGAAATGCGTTCATGTGTGAAGCGGCCCGATGAGCCAAGGCGGGGGTA
GAACAAATACTGGACGGGCCATGGGCACACATCCCTCGTGTACTACAGAC
AACCAATGCAGCGGCGTTCAATCAGAGTTGTAGGGGGAGGTGGACAGGAG
CCAAGGCGAAACGGCAACAACCGTCAACCACAATGGTGTTCAGCAGTCCG
CTACTCGTCTGTGTACGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
GTTTTCACTCACACTCAAACCGTCCGACATTTTTTCGATTTCGGGAAGTT
CTCGTTCACTTTCGAGTGGCTACTTTGTCGTCGACAAAGAAGGTTGCTTC
GTACGTGCGTATTCAAATGCTGGTGTGCGTCCGAATGTGGACGTGGCGAC
CAGACGGAATCGCTTGAATCGCCATTCAGTATTGTGAACATTGTGATGTG
CACCTTGTTTCCGAATGTTTGTCATGTGTCAAACGGTGGGCTCCCGCGAG
TCCTCCGCTCACATGGTGCGTGGGGCAGACCCGCCAAAAAGGAATGGTCT
CCCATCAAACGTTCCCGTGTTTGTCCGAAGTTAGTTGTGGTACACCACTG
ATTTCGCATGGGTGGCTTGACCCCTTCCGCAACTCTGAACATCTGCTTTC
CTTCGTTTGTTTGTGTTCGCCCAGATTTGAGTCCTCGGGGACAAATGACA
TGATTGTATGACATGTGGGTCTCCTGGAACCCCGATACCTGCAGGAAGAA
GAGAACATCTTCGCGAGTCGATGTGCTACCCGTGGCAAAAATTGCGGGTT
TTGCACGAACTCGGAATAGACGCGTGAACATTTGCGCTTTGGGGGGGCGG
CAACGTTGGTTATCATGCCCTTTTCATTCCTTTGGGCGAGCGTACAACCA
ACGTTCTTCACGTTGTCTTGGGGCCAGAATCGACCAAACACGTCACTTTC
GAATCAAGTCACGACACTTGAACTTTGTGAACATGCTCCTTGGCCGCCAC
AGCGGCGGAACAAGCACATAGACTACGGTAGGCTTTTTATGTAAGAGACT
TGGAAGCATGTGCA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6946:3416..7379-

>mRNA_Ecto-sp13_S_contig6946.17943.1 ID=mRNA_Ecto-sp13_S_contig6946.17943.1|Name=mRNA_Ecto-sp13_S_contig6946.17943.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1224bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6946:3416..7379- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCCCCGCTCGACAAAGACCAGCTCAAGCGGAGGTGCCTCGAGAGGGT
TCGCACCGAACGCAGCCGCCTCATGGCACGGATGCGAGGCCGGAAGGGCG
CGGAGGAAGAAGCACGGCAGCTCTCCAGCCACGCTGGTGGGGACTCCGGT
TCCCCGCCCACGGCCGCAGCGGGGCAGGAAGAAAACCTGTCCTCTCCGGG
GCAGCACTCGCTGTCCTCCGCCAGGGAAATCCTACGGCAAGGCTTGAGCG
AGCTGTCGGGCGGAAATGGTGACATCAACAAGCGACGCCGCCCGCAGCAT
CACCCCAGGAATCACGAGCGAACAGCGCTAGGTTACGAAGACTTTGGAGC
GAGTCCTGTACGGTTAGACAGCAACGGCGGAGGGAGACAGCAACAGCAGC
AGCCGCAGCAGCAGCAGCAGCATGCCGGGGGGAGCGAATCGTCGTCGTTC
CTCTCGGCAATCGAGGAGGAGAACGCCAGCTACCTCAACGCCTGCGCGCG
TGGGCAGGGGGACTCTCTGCGACAGCGCGGGCCACGGGATGGCACCGCGG
CTGACCTGGCACCGATGTCGACAAGCCTCCGGGAACAAACCCAAGGGTTT
GTGGAAGGGAACAACGATGATGATGACGCGCTTATGGCCCATGATGGCGG
CGACGCACAACAACCTCGGCAGCCGCAGCAGCAGCAGCAGCAGCAACCCG
AGGCGATGGTGGACGAGGACGAGGTGGGGTGGGGTGACGGCGGCGGGGCG
GAGGACTGCTGCGACGAGGAGAACCTGCTCTCGCCCGACGAGTACCTGGA
GATGATGCAGTACATTGAGGAGGCTTGCAAGGAGGAAGACCTCAGGGCCG
AGGCGGCGGTTCTCGAGGACTACGAACTTACGAGACGCTTGGAGGAGGAG
GAGGTGGAGTATGCGGTAGCGAGTCTTGATGATATCAACGGTAATGGTCA
GGATGACGCGGTTCTGTGCCCCGTCTGCAAGCGCGACTACCTTCTCCACC
CCGGCCCGCCTTCGGCTTCCATCGTCTGCGCTTGCGGCTTCCGCCTAGAC
ACGGGTGGAGATCGCCTCGGCCTTGAGCACTTCAAGCAGCAGCTGGCGGA
TACCTACAGCGAGCATAGCACCGCTTGCAGCGCCGAGCCTAGCTTTGTGG
TAGAGGGCGCGCCTGGCTTCGACGTCCTTTGGAGCTCGTGCGACGGATGC
GGCTTCGCCAGGGTCGTCCTCTGA
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