prot_Ecto-sp13_S_contig6938.17932.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6938.17932.1
Unique Nameprot_Ecto-sp13_S_contig6938.17932.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length526
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6938.17932.1 vs. uniprot
Match: D8LSH1_ECTSI (Serine/threonine protein kinase, possibly NIMA-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH1_ECTSI)

HSP 1 Score: 672 bits (1735), Expect = 8.280e-233
Identity = 486/528 (92.05%), Postives = 490/528 (92.80%), Query Frame = 0 
Query:    1 MHALSDQLIDLKMDDAVPMANLIVEEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKHQLELEEEKRIAAEMALNRLRRKAAERRRRASLSRSNSPMGGEGGRIGSGSPRYPXXXXXXXXXXXXXXXXXXXXXXXXXDGSPTRGRRPSILQRLGSLATSPLQSRRKSLSTPASPSGGNDSPRGGSNNGSQSARGPGAGMSDVDKXXXXXXXXXXXXXXXXXXXXXXXRAVAKGPTGAPRQSLGRPKEATDYVVNPTRRRSKSGANSNNSSXXXEVSSRSXXXXXXXXXXXXXXXXXRPRVSQDGETSSKCHLSPDLPKLQLGVNASATPALRSGRSSADR--GGSPREERGSGKGDSLFEEEDDSNDLFRVLKEQAKAHAKEGEDKEVHDREEELRAKLREAEQRCLDLQSSMEKVREAGKRRGSIIVPPPPSGVSAGGAEALDDMGLPKLSVDINPSTRGSLSPGGGGSAQRYSRSASNCSGDEDMASDFEDEPVPYCQSHLEEIHDAPTPVGNLVDRVQ 526
            MHALSDQLIDLKMDDAVPMANLIVEEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKHQLELEEEKRIAAEMALNRLRRKAAERRRRASLSRSNSPMGGEGGRIGSGSPRYPXXXXXXXXXXXXXXXXXXXXXXX  DGS TRGRRPSILQRLGSLATSPLQSRRKSLSTPASPSGGNDSPRGGSNNGSQSARGPGAGMSDVD XXXXXXXXXXXXXXXXXXXXXXX AVAKGPTGAPRQSLGRPKEATDYVVNPTRRRSKSG NSNN  XXXEVSSRS  XXXXXXXX       RPR SQDGE+SSKCHLSPDLPKLQLG NASATPALRSGRSSADR  GGSPRE RGSGKGDSLFEEEDDSNDLFRVLKEQAKAHAKEGEDKE+HDREEELRAKLREAEQRCLDLQS+MEKVREAGKRRGSI              EALDDMGLPKLSVD+NPSTRGSLSPGGGGSAQRYSRS SNCSGDED ASDFEDEPVPYCQSHLEEIHDAPTPVGNLVDRVQ
Sbjct:  281 MHALSDQLIDLKMDDAVPMANLIVEEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKHQLELEEEKRIAAEMALNRLRRKAAERRRRASLSRSNSPMGGEGGRIGSGSPRYPXXXXXXXXXXXXXXXXXXXXXXX--DGSHTRGRRPSILQRLGSLATSPLQSRRKSLSTPASPSGGNDSPRGGSNNGSQSARGPGAGMSDVDXXXXXXXXXXXXXXXXXXXXXXXXSAVAKGPTGAPRQSLGRPKEATDYVVNPTRRRSKSGTNSNNXXXXXEVSSRSARXXXXXXXXRGGGENGRPRASQDGESSSKCHLSPDLPKLQLGANASATPALRSGRSSADRYSGGSPREGRGSGKGDSLFEEEDDSNDLFRVLKEQAKAHAKEGEDKEIHDREEELRAKLREAEQRCLDLQSNMEKVREAGKRRGSIXXXXXXXXXXXXXGEALDDMGLPKLSVDVNPSTRGSLSPGGGGSAQRYSRSVSNCSGDEDRASDFEDEPVPYCQSHLEEIHDAPTPVGNLVDRVQ 806
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6938.17932.1 vs. uniprot
Match: A0A6H5KTY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY0_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.150e-13
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:  492 MASDFEDEPVPYCQSHLEEIHDAPTPVGNLVDRVQ 526
            MASDFEDEPVPYCQSHLEEIHDAPTPVGNLVDRVQ
Sbjct:    1 MASDFEDEPVPYCQSHLEEIHDAPTPVGNLVDRVQ 35
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6938.17932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSH1_ECTSI8.280e-23392.05Serine/threonine protein kinase, possibly NIMA-lik... [more]
A0A6H5KTY0_9PHAE2.150e-13100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availableCOILSCoilCoilcoord: 390..424

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6938contigEcto-sp13_S_contig6938:828..7300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6938.17932.1mRNA_Ecto-sp13_S_contig6938.17932.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6938 816..7300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6938.17932.1 ID=prot_Ecto-sp13_S_contig6938.17932.1|Name=mRNA_Ecto-sp13_S_contig6938.17932.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=526bp
MHALSDQLIDLKMDDAVPMANLIVEEGEGDGPNAPSPSESDAVAAAAAAA
AQSGGSRSQLKAQKHQLELEEEKRIAAEMALNRLRRKAAERRRRASLSRS
NSPMGGEGGRIGSGSPRYPGSPGSPGSPDNGDTGTGGGGGGGDGDGSPTR
GRRPSILQRLGSLATSPLQSRRKSLSTPASPSGGNDSPRGGSNNGSQSAR
GPGAGMSDVDKAMALAVAAAEKLDGDGGGDGGGGRAVAKGPTGAPRQSLG
RPKEATDYVVNPTRRRSKSGANSNNSSGGGEVSSRSARGSAGGGSPRGGG
EGGRPRVSQDGETSSKCHLSPDLPKLQLGVNASATPALRSGRSSADRGGS
PREERGSGKGDSLFEEEDDSNDLFRVLKEQAKAHAKEGEDKEVHDREEEL
RAKLREAEQRCLDLQSSMEKVREAGKRRGSIIVPPPPSGVSAGGAEALDD
MGLPKLSVDINPSTRGSLSPGGGGSAQRYSRSASNCSGDEDMASDFEDEP
VPYCQSHLEEIHDAPTPVGNLVDRVQ
back to top