prot_Ecto-sp13_S_contig6934.17927.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6934.17927.1
Unique Nameprot_Ecto-sp13_S_contig6934.17927.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length542
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5K147_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K147_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 3.960e-26
Identity = 63/114 (55.26%), Postives = 81/114 (71.05%), Query Frame = 0 
Query:    1 MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSEREDVERGLDDHGDKKWRKALLSVTTARNRLGVVLEQNGKYAEASTLLEQSQAVLEDMLGPDHPEVASSLNNRAGL 114
            M+RLA Q+W GTGYCLPDL +AAGQYD+ EK   Q +++ E    G++DHG K+ R+ALL + TAR RL  V  Q GKY+EA TL +Q+ A  E +LGP+HP +A  LNN AGL
Sbjct:  362 MMRLAGQNWRGTGYCLPDLQVAAGQYDLVEKDLGQRLTDAERKTHGVEDHGSKESRRALLRLNTARARLAYVRLQQGKYSEAETLYKQAAASNELVLGPEHPRLAMDLNNLAGL 475
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5KZG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG4_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 2.890e-25
Identity = 60/112 (53.57%), Postives = 78/112 (69.64%), Query Frame = 0 
Query:    1 MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSEREDVERGLDDHGDKKWRKALLSVTTARNRLGVVLEQNGKYAEASTLLEQSQAVLEDMLGPDHPEVASSLNNRA 112
            M+RLA+Q W  TGYCLP+L LA+GQYD AE+  RQ++SE E+ ++G++D    K R+ALL V TAR+ LG VL + GKY E   L  +   + ED LGPDHP+ A  LNNRA
Sbjct:  263 MIRLARQGWFRTGYCLPELLLASGQYDQAEEGLRQQLSEAENDKQGVEDDDSNKSRRALLGVNTARSNLGAVLREQGKYVEVGRLCLRDVEMGEDTLGPDHPDFAIRLNNRA 374
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.810e-24
Identity = 59/114 (51.75%), Postives = 80/114 (70.18%), Query Frame = 0 
Query:    1 MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSEREDVERGLDDHGDKKWRKALLSVTTARNRLGVVLEQNGKYAEASTLLEQSQAVLEDMLGPDHPEVASSLNNRAGL 114
            M+RLA Q+W GT Y LPD+ L AGQYD+AEKS RQE+++ E   R  +DH  ++ R+A+    TAR+RL  VLE+ GK+ EA T+   S ++L+   GPDHPE+A+ LNN AGL
Sbjct:  263 MIRLAGQNWAGTAYVLPDVQLDAGQYDLAEKSHRQELADAEHEAREFEDHDSEESRRAMHGENTARSRLAHVLEKQGKFEEAETIYRHSMSILKKTHGPDHPEIATGLNNWAGL 376
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 5.120e-24
Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 0 
Query:    1 MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSERE-DVERGLDDHGDKKWRKALLSVTTARNRLGVVLEQNGKYAEASTLLEQSQAVLEDMLGPDHPEVASSLNNRAGL 114
            M+RLA Q+W  TG+CLPDL LAAGQYD AE+S R+ + + E D  R  +DH  K+ R+ALL V  AR RL +VLE+ GK+AEA  L  ++  V E MLG DHP++A+S+NNRA L
Sbjct:  264 MMRLAGQNWRETGFCLPDLQLAAGQYDRAEESHRELLGDAENDAARVAEDHDSKESRQALLRVNAARARLALVLEKQGKHAEADPLYLRAIEVAEKMLGRDHPDLATSINNRAEL 378
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 9.800e-24
Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 0 
Query:    1 MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSEREDVERGLDDHGDKKWRKALLSVTTARNRLGVVLEQNGKYAEASTLLEQSQAVLEDMLGPDHPEVASSLNNRAG 113
            M+ LA ++W GTGY LPDL LAAG+YD+AEKS RQ +++ E+  R ++DH  K+ R AL     AR+RL  VL++ GKY EA TL  +S A+ E + GPDHP+VA  LNNRAG
Sbjct:  265 MLHLAGENWRGTGYVLPDLQLAAGEYDLAEKSQRQALTDAENEVREVEDHDSKESRWALDRENEARSRLATVLDKQGKYEEAETLCVRSLAIDEKVYGPDHPKVAIGLNNRAG 377
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5L9X6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9X6_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 4.180e-20
Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = 0 
Query:    1 MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSEREDV--ERGLDDHGDKKWRKALLSVTTARNRLGVVLEQNGKYAEASTLLEQSQAVLEDMLGPDHPEVASSLNN 110
            MVRLAQ+ W GTGYCL DL +AAGQ+D AE   RQE+SE ED   +R  D+H   K R+ALL  + AR  LGVV E   K+ EA  L   S A+ E++ GPDHP+VA+ L N
Sbjct:  108 MVRLAQRDWHGTGYCLTDLQVAAGQFDEAETGIRQEISEVEDELRDRREDNH---KPRQALLRASAARVNLGVVFENQDKFDEAEALFRSSLAIDEEIYGPDHPDVATVLGN 216
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: D7FXH0_ECTSI (Tetratricopeptide repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH0_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.230e-19
Identity = 56/109 (51.38%), Postives = 76/109 (69.72%), Query Frame = 0 
Query:    1 MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSEREDVERGLDDHGDKKWRKALLSVTTARNRLGVVLEQNGKYAEASTLLEQSQAVLEDMLGPDHPEVASSLN 109
            M+ LAQ++W GTG  LP L LAAGQYD AEK  RQ++SE ++ ERG +D+G  + R+A   V  A   LG VL++ GKYAEA  L  + QA+ E +LGP+HP +AS+L+
Sbjct:  264 MIGLAQRNWHGTGRFLPRLQLAAGQYDQAEKGFRQKLSEADNNERGEEDNGSTESREAPPDVIGAMASLGSVLQEQGKYAEAEALYVRCQAIEEKVLGPEHPSLASTLH 372
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5JK27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK27_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.550e-19
Identity = 54/112 (48.21%), Postives = 81/112 (72.32%), Query Frame = 0 
Query:    1 MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSEREDVERGLDDHGD-KKWRKALLSVTTARNRLGVVLEQNGKYAEASTLLEQSQAVLEDMLGPDHPEVASSLNNR 111
            M+ LA+Q+W GT + LP++ LAAGQY+ AEK  RQ + E E+     +D  D K+ R+ALL++ TA+  LG VL+Q GK+AEA +L + S A+LE++LG +HP+VA++L+ R
Sbjct:  233 MIHLARQNWCGTWHWLPEIQLAAGQYEEAEKGLRQLLLEAEEALSRFEDSSDTKESRQALLTLQTAKGTLGFVLQQQGKFAEAESLYKNSLAILEEVLGAEHPDVATTLSYR 344
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: D7FGT0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT0_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.060e-18
Identity = 61/129 (47.29%), Postives = 80/129 (62.02%), Query Frame = 0 
Query:    1 MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSEREDVERGLDDHGDKKWRKALLSVTTARNRLGVVL---------------EQNGKYAEASTLLEQSQAVLEDMLGPDHPEVASSLNNRAGL 114
            M+RLAQ++W GTG  LP L L AGQYD AEK  RQE+SE ED +RG++D  +K+ RK   S+ +A+  LG VL                  GKY EA  L ++S ++ E  LGPDHP+VA+SL + AGL
Sbjct:  264 MIRLAQRNWHGTGRFLPRLQLDAGQYDQAEKGFRQELSEAEDNKRGVEDKDNKESRKK--SLRSAKASLGCVLGLKSPGLEHGISRGHHGEGKYEEARALHQRSHSIFEKALGPDHPDVATSLTSLAGL 390
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: D8LGD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD7_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 2.530e-10
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 0 
Query:    1 MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSEREDVERGLDDHGDKKWRKALLSVTTARNRLGVVLEQNGK 78
            M+RLA Q+W  TG+CLPDL  AAGQYD+AE+S R+     E+  R  +D+  K+ R+ALL    AR RL +VLE+  +
Sbjct:  126 MMRLAGQNWRETGFCLPDLQRAAGQYDLAEESHRKLPKGAENDARVAEDYDSKESRRALLRANAARARLALVLEKQAR 203
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5K147_9PHAE3.960e-2655.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZG4_9PHAE2.890e-2553.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9V8_9PHAE1.810e-2451.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSC7_9PHAE5.120e-2454.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1L3_ECTSI9.800e-2453.98Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5L9X6_9PHAE4.180e-2053.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXH0_ECTSI1.230e-1951.38Tetratricopeptide repeat containing protein n=1 Ta... [more]
A0A6H5JK27_9PHAE1.550e-1948.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGT0_ECTSI1.060e-1847.29TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
D8LGD7_ECTSI2.530e-1048.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 283..303
NoneNo IPR availableCOILSCoilCoilcoord: 541..541
NoneNo IPR availablePFAMPF13424TPR_12coord: 189..264
e-value: 5.1E-19
score: 68.3
coord: 274..348
e-value: 1.0E-17
score: 64.1
coord: 483..532
e-value: 3.8E-8
score: 33.5
coord: 64..128
e-value: 6.4E-12
score: 45.6
coord: 399..473
e-value: 2.0E-18
score: 66.5
NoneNo IPR availablePFAMPF13374TPR_10coord: 357..397
e-value: 9.2E-7
score: 28.5
coord: 146..186
e-value: 6.4E-12
score: 44.9
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 282..387
coord: 185..299
coord: 367..484
coord: 468..532
coord: 22..196
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 356..376
score: 50.48
coord: 225..244
score: 29.0
coord: 312..329
score: 43.33
coord: 391..412
score: 37.27
coord: 247..265
score: 30.0
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 442..475
e-value: 0.0026
score: 27.0
coord: 316..349
e-value: 9.9
score: 15.0
coord: 147..180
e-value: 0.03
score: 23.5
coord: 105..138
e-value: 150.0
score: 4.7
coord: 189..223
e-value: 48.0
score: 9.0
coord: 484..517
e-value: 29.0
score: 10.9
coord: 63..96
e-value: 4.2
score: 16.3
coord: 232..265
e-value: 2.1E-5
score: 34.0
coord: 400..433
e-value: 15.0
score: 13.5
coord: 274..307
e-value: 0.43
score: 19.6
coord: 358..391
e-value: 0.48
score: 19.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 63..96
score: 5.841
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 358..391
score: 8.29
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 147..180
score: 6.372
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 442..475
score: 7.611
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 274..307
score: 5.399
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 484..517
score: 6.372
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 400..433
score: 5.251
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 232..265
score: 8.673
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 190..223
score: 5.222
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 316..349
score: 5.93
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 200..382
e-value: 2.2E-58
score: 199.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 396..539
e-value: 5.1E-49
score: 168.9
coord: 2..199
e-value: 1.6E-46
score: 160.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 394..532
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 64..185
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 142..264
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 310..429
IPR010069Filamentous haemagglutinin, 20-residue x2 repeatTIGRFAMTIGR01731TIGR01731coord: 105..119
e-value: 0.51
score: 8.4
coord: 400..414
e-value: 1.5
score: 6.9
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 63..517
score: 23.375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6934contigEcto-sp13_S_contig6934:2812..7794 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6934.17927.1mRNA_Ecto-sp13_S_contig6934.17927.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6934 145..7794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6934.17927.1 ID=prot_Ecto-sp13_S_contig6934.17927.1|Name=mRNA_Ecto-sp13_S_contig6934.17927.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=542bp
MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSEREDVERGLDDH
GDKKWRKALLSVTTARNRLGVVLEQNGKYAEASTLLEQSQAVLEDMLGPD
HPEVASSLNNRAGLLKTQGKYAQANPLYWRAAVISEAVLGPGHPNVAAAL
NNLAELLRMQGHFAQAEPLYGRVIEIWEEVHGPNHPLLATALSNRAALLN
TAQGDCENAAALYERSLAIREKTLGPDHPALAPALNNLAMLFKKQGKYDK
AEPLYERCQALDEKVLGSEHPCFALTLHNRAELLRAQAKYAEAEQLYDQS
QAIREKVLGPEHPDVAQSLNDRAGLLEDQGKYAEAAPLYERSQAIREKAL
GSDHPDVAQSLDHRAELLLTQEKYEEAEDLFSRSLAIREKTLGPYHPSVA
ASLNNQAGLLHSQGKFDDADPLYIRVLEILGKTFGEQHPDYASALSNRAE
LLRAQGKFREAEPMYKRSLAIGEKTFGPDHPEVASHLTNWAVLLHEQGKY
MEAIALLERVLSIRMQKLGENHPDTVSSKNSLEMVRGKVRA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR010069Fil_hemagglutn_20-aa_x2_rpt
IPR013026TPR-contain_dom