mRNA_Ecto-sp13_S_contig6934.17927.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: D7FTB3_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB3_ECTSI) HSP 1 Score: 347 bits (890), Expect = 2.620e-101 Identity = 176/261 (67.43%), Postives = 212/261 (81.23%), Query Frame = 3
Query: 198 MNVNIEEVLRLETELKAQGEIARSAS--LAAKVNMLKYLQVQAVAEYQTEYDGLYYELNKEGGLECLRRIAPFRSPERQQPKVLETQDCGEGDRLEKELDFYLAEAELAKQGLDELAATVTNDLRQCEVQRVSVKSRESTRRKAIRFCGGDVRKITDMARVTVMCDTPKALEQAYLAIIGSLQPQDVLRVSNGFNSDWMPSGYRDVKVNPIVNEHLCEIQLQLRNFFALKSGQHAVYTWARELDVTTEVRASHLFENLSPK 974
MN++I+EVLRLE ELK + ++S L AK N+LKY+QV V ++ YD L+YELN+ GGLECLR IAP RS +R QPK+ E QDC EGDRLE++L FYL +A LAK LD L A+V D + E+QRV VKSRESTRRKAI+FCGGDVRKITDMARVTV+C+TP+ALEQA+ AI+GSLQPQDVLRV+NGFNSDWMPSGYRDVKVN +V+EHLCEIQLQLR F ALKS QHAVY WAR+L+VT+E+ +FEN+SP+
Sbjct: 44 MNIDIKEVLRLEDELKKTLRESPTSSIRLDAKTNLLKYVQVNTVLGFEEAYDDLFYELNENGGLECLRSIAPARSKDRFQPKISELQDCDEGDRLEQQLQFYLTDAGLAKPFLDVLVASVAQDSTKYEIQRVGVKSRESTRRKAIKFCGGDVRKITDMARVTVICETPEALEQAFSAILGSLQPQDVLRVANGFNSDWMPSGYRDVKVNAVVHEHLCEIQLQLREFVALKSDQHAVYEWARDLNVTSEMEPEDMFENISPE 304
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE) HSP 1 Score: 325 bits (834), Expect = 2.430e-99 Identity = 172/260 (66.15%), Postives = 202/260 (77.69%), Query Frame = 3
Query: 198 MNVNIEEVLRLETELKAQGEIARS-ASLAAKVNMLKYLQVQAVAEYQTEYDGLYYELNKEGGLECLRRIAPFRSPERQQPKVLETQDCGEGDRLEKELDFYLAEAELAKQGLDELAATVTNDLRQCEVQRVSVKSRESTRRKAIRFCGGDVRKITDMARVTVMCDTPKALEQAYLAIIGSLQPQDVLRVSNGFNSDWMPSGYRDVKVNPIVNEHLCEIQLQLRNFFALKSGQHAVYTWARELDVTTEVRASHLFENLSPK 974
MNV+IEE+LRLE ELKA E S A+ AK+N+LK LQVQ V ++Q YD LYYELNKEGGLECLR IAP RS QPKVL+ Q+C EG +LE +L FYLA+AELAK LDEL V +D + +VQ VKS ESTRRKA CGGDVRK+ DMARV V+C TP+AL++AYLAI+G L +VLRV NGFNSDWMPSGYRDVK+NP+VN+HLCEIQL LR FFALK GQH VY WAREL+VTTE+R LF+N+SP+
Sbjct: 1 MNVDIEELLRLENELKASCERETSPATPDAKMNILKCLQVQTVVQFQLAYDDLYYELNKEGGLECLRSIAPARSTGIVQPKVLDPQNCDEGGQLENQLQFYLADAELAKPHLDELITKVAHDSSKYKVQCADVKSWESTRRKASNSCGGDVRKVADMARVAVICATPEALKEAYLAIMG-LPEANVLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPE 259
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: D7FH93_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH93_ECTSI) HSP 1 Score: 322 bits (824), Expect = 4.090e-96 Identity = 169/263 (64.26%), Postives = 201/263 (76.43%), Query Frame = 3
Query: 198 MNVNIEEVLRLETELKAQGEIARS-ASLAAKVNMLKYLQVQAVAEYQTEYDGLYYELNKEGGLECLRRIAPFRSPERQQPKVLETQDCGEGDRLEKELDFYLAEAELAKQGLDELAATVTNDLRQCEVQRVSVKSRESTRRKAIRFCGGDVRKITDMARVTVMCDTPKALEQAYLAIIGSLQPQDVLRVSNGFNSDWMPSGYRDVKVNPIVNEHLCEIQLQLRNFFALKSGQHAVYTWARELDVTTEVRASHLFENLSPKGSR 983
M+V+I E++RLE ELK E S SL AKVN+LKYLQVQ V +Q +YDGLYYELNK GGLECLR IA RS E QPKVL QDC E ++LEK+L FYLA+AELAK LDEL V +D + EVQR VKSRESTRRKA R GDVRK+ DMARVT++C P+AL++AY +I+ + Q VLR+ NGFNSDWMPSGYRDVK+NP+VNEHLCEIQL LR FFALK GQH VY WAR+L+VTT +R+ L +NLSP+ S+
Sbjct: 1 MDVDINELIRLEAELKTSCESETSPVSLDAKVNILKYLQVQTVLRFQGQYDGLYYELNKTGGLECLRGIAAVRSTELLQPKVLGLQDCSEDEQLEKQLQFYLADAELAKPNLDELVTKVAHDSSKYEVQRAEVKSRESTRRKASREHDGDVRKVADMARVTLICANPEALKEAYSSIM-EMPEQHVLRIKNGFNSDWMPSGYRDVKLNPVVNEHLCEIQLHLREFFALKGGQHEVYKWARDLNVTTGMRSEDLIKNLSPEVSK 262
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5JHK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK0_9PHAE) HSP 1 Score: 311 bits (797), Expect = 1.540e-95 Identity = 167/276 (60.51%), Postives = 203/276 (73.55%), Query Frame = 3
Query: 198 MNVNIEEVLRLETELKAQGEIARSA-SLAAKVNMLKYLQVQAVAEYQTEYDGLYYELNKEGGLECLRRIAPFRSPERQQPKVLETQDCGEGDRLEKELDFYLAEAELAKQGLDELAATVTNDLRQCEVQRVSVKSRESTRRKAIRFCGGDVRKITDMARVTVMCDTPKALEQAYLAIIGSLQPQDVLRVSNGFNSDWMPSGYRDVKVNPIVNEHLCEIQLQLRNFFALKSGQHAVYTWARELDVTTEVRASHLFENLSPKGSRGDGPPGSAALAWH 1022
M+V+I E+LRLE EL+ E R+ AK+N+LK+LQ++AV +Y+ YD LYYELNK GGLECLR IAP R + QPKVLE QDC E R +L+FYLA+AELAK LDEL A + +CEV VKSR ST+RKA + GGDVRK+ DMARV+V+CD P+AL++AYLAI+ S Q DVLRV+NGFNSDWMPSGYRDVKVNP+V+EHLCEIQL LR FF LK GQHAVY WAR+L VTT +RA +LFE LS + + + G A WH
Sbjct: 1 MSVDIAELLRLEAELENSCEDCRNPYDRDAKLNLLKFLQIRAVLQYEEAYDRLYYELNKHGGLECLREIAPARLKDLLQPKVLELQDCNEDVRFAAQLEFYLADAELAKNRLDELVADIAKHTGECEVHCAEVKSRASTQRKASKSYGGDVRKVADMARVSVICDNPEALKRAYLAIVESFQG-DVLRVANGFNSDWMPSGYRDVKVNPVVDEHLCEIQLHLREFFTLKGGQHAVYEWARDLKVTTIMRAENLFEFLSREIT--EEMIGLAERNWH 273
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI) HSP 1 Score: 323 bits (828), Expect = 3.840e-94 Identity = 168/261 (64.37%), Postives = 201/261 (77.01%), Query Frame = 3
Query: 195 LMNVNIEEVLRLETELKAQGEIARSA-SLAAKVNMLKYLQVQAVAEYQTEYDGLYYELNKEGGLECLRRIAPFRSPERQQPKVLETQDCGEGDRLEKELDFYLAEAELAKQGLDELAATVTNDLRQCEVQRVSVKSRESTRRKAIRFCGGDVRKITDMARVTVMCDTPKALEQAYLAIIGSLQPQDVLRVSNGFNSDWMPSGYRDVKVNPIVNEHLCEIQLQLRNFFALKSGQHAVYTWARELDVTTEVRASHLFENLSPK 974
++ V+I ++LRLE ELK E S+ SL AKVN+LKYLQVQ V ++Q YD LYYEL+K GGL+CLR IAP S QPKV + QDCGE ++LE +L FYLA+AELAK LDEL V +D+ + EVQ V VKSRESTRRKA RFC GDVRK+ D+ARVTV+C TP+AL++AYLAI+ L Q VL + NGF SDWMPSGYRDVK+NP+VNEHLCEIQL LR FFALK GQHAVY WAR+L+VTT++R LFE LS K
Sbjct: 1 MVAVDINDLLRLEAELKTSRERETSSTSLDAKVNLLKYLQVQTVLQFQAAYDDLYYELSKTGGLDCLRTIAPVPSTGVFQPKVFDPQDCGEDEQLENQLQFYLADAELAKAHLDELVMNVAHDMSKYEVQFVDVKSRESTRRKASRFCDGDVRKVADIARVTVICTTPEALKEAYLAIM-ELPTQQVLLIKNGFKSDWMPSGYRDVKLNPVVNEHLCEIQLHLREFFALKGGQHAVYEWARDLNVTTDMRCEDLFETLSAK 260
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE) HSP 1 Score: 318 bits (816), Expect = 3.910e-92 Identity = 165/260 (63.46%), Postives = 204/260 (78.46%), Query Frame = 3
Query: 204 VNIEEVLRLETELKA-QGEIARSASLAAKVNMLKYLQVQAVAEYQTEYDGLYYELNKEGGLECLRRIAPFRSPERQQPKVLETQDCGEGDRLEKELDFYLAEAELAKQGLDELAATVTNDLRQCEVQRVSVKSRESTRRKAIRFCGGDVRKITDMARVTVMCDTPKALEQAYLAIIGSLQPQDVLRVSNGFNSDWMPSGYRDVKVNPIVNEHLCEIQLQLRNFFALKSGQHAVYTWARELDVTTEVRASHLFENLSPKGS 980
V+I E+LRLE ELK+ + + SL AKVN+LKYLQ+Q V ++Q YD +YYEL++ GGL+CLR IAP RS QPKVL+ QDCG+ D+LEK+L+FYLA+AELAK LDEL V +D + EVQ V +KSRESTRRKA GDVRK+ DMARVTV+C TP+AL++AYLAI ++ +VLRV NGFNSDWMPSGYRDVK+NP+VN+HLCEIQL LR FF LK GQHAVY WAREL+VTT++R+ LF+NLSP+ S
Sbjct: 4 VDISELLRLEAELKSSRARETWTVSLDAKVNLLKYLQIQTVLQFQAAYDDMYYELHQTGGLDCLRSIAPVRSTGVFQPKVLDLQDCGQDDQLEKQLEFYLADAELAKACLDELVMNVAHDSSKYEVQCVEIKSRESTRRKASTGYDGDVRKVADMARVTVICATPEALKEAYLAI---MELPEVLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLRGFFELKGGQHAVYEWARELNVTTDMRSKDLFKNLSPEVS 260
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5K147_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K147_9PHAE) HSP 1 Score: 320 bits (821), Expect = 1.020e-90 Identity = 164/258 (63.57%), Postives = 197/258 (76.36%), Query Frame = 3
Query: 198 MNVNIEEVLRLETELK-AQGEIARSASLAAKVNMLKYLQVQAVAEYQTEYDGLYYELNKEGGLECLRRIAPFRSPERQQPKVLETQDCGEGDRLEKELDFYLAEAELAKQGLDELAATVTNDLRQCEVQRVSVKSRESTRRKAIRFCGGDVRKITDMARVTVMCDTPKALEQAYLAIIGSLQPQDVLRVSNGFNSDWMPSGYRDVKVNPIVNEHLCEIQLQLRNFFALKSGQHAVYTWARELDVTTEVRASHLFENLS 968
M ++IEE+ LE +LK ++G AS AKVN+LKYLQ++AV +Q YD LYYELNK+GGLECLR I P R E QPKVLE QDC E + LEK+LDFYLA+AEL K LDEL + + +D + VQ V VKSR+ TR KA + CGGDVRK+ DMARVTV+C TP+AL++ Y AI G +P VLRV NGFNSDWMPSGYRDVKVNP+VN HLCEIQLQLR FFALK GQHAVY WAREL+V ++RA +L++NLS
Sbjct: 98 MGMDIEELCDLEAKLKTSRGSDTSPASRDAKVNILKYLQIKAVTRFQEAYDDLYYELNKKGGLECLRSIVPIRWKEVLQPKVLELQDCDEDEELEKKLDFYLADAELTKPHLDELVSKIAHDSCKFVVQYVDVKSRDRTREKARKSCGGDVRKVADMARVTVVCATPEALKEVYSAITGLPKPHHVLRVKNGFNSDWMPSGYRDVKVNPVVNNHLCEIQLQLREFFALKGGQHAVYKWARELNVVADLRAEYLYKNLS 355
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5JK27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK27_9PHAE) HSP 1 Score: 308 bits (789), Expect = 2.930e-86 Identity = 155/226 (68.58%), Postives = 179/226 (79.20%), Query Frame = 3
Query: 294 MLKYLQVQAVAEYQTEYDGLYYELNKEGGLECLRRIAPFRSPERQQPKVLETQDCGEGD-RLEKELDFYLAEAELAKQGLDELAATVTNDLRQCEVQRVSVKSRESTRRKAIRFCGGDVRKITDMARVTVMCDTPKALEQAYLAIIGSLQPQDVLRVSNGFNSDWMPSGYRDVKVNPIVNEHLCEIQLQLRNFFALKSGQHAVYTWARELDVTTEVRASHLFENLS 968
MLKYLQVQ V +Y+ YD LYYELNKEGGLECLR IAP + + QPKVL QD D RL K+L FYLA+AELAK+ LDEL L C V V VKS ESTRRKA +FCGGDVRK+ DMARVTV+CDTP+AL+Q + I+G LQPQDVLRV NGF+SDW P GYRDVKVNP+VNEHLCEIQLQLRNFF LKSGQHAVYTWAR+L+V T+++A+ LF+N+S
Sbjct: 1 MLKYLQVQTVLQYEAAYDALYYELNKEGGLECLRNIAPVDTGDPLQPKVLNLQDYSNADDRLAKQLRFYLADAELAKKRLDELVTNAAEGLETCNVHCVVVKSLESTRRKASQFCGGDVRKVADMARVTVICDTPEALKQVFSKIMGLLQPQDVLRVKNGFDSDWTPGGYRDVKVNPVVNEHLCEIQLQLRNFFTLKSGQHAVYTWARDLNVVTKMQATDLFKNVS 226
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: A0A6H5KZG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG4_9PHAE) HSP 1 Score: 293 bits (751), Expect = 1.070e-84 Identity = 155/259 (59.85%), Postives = 193/259 (74.52%), Query Frame = 3
Query: 198 MNVNIEEVLRLETELKAQGEIARSASLA-AKVNMLKYLQVQAVAEYQTEYDGLYYELNKEGGLECLRRIAPFRSPERQQPKVLETQDCGEGD-RLEKELDFYLAEAELAKQGLDELAATVTNDLRQCEVQRVSVKSRESTRRKAIRFCGGDVRKITDMARVTVMCDTPKALEQAYLAIIGSLQPQDVLRVSNGFNSDWMPSGYRDVKVNPIVNEHLCEIQLQLRNFFALKSGQHAVYTWARELDVTTEVRASHLFENLS 968
M V+I++++ LE ELK + A + AKVN+LKYLQ+Q V +++ YD LYYEL KEGGLECLR IAPFRS + QPKVLE CG+ D RL +L+FYLA AELAK+ LDE+ + +D + EVQ V VKSREST+RK RF GGDVRK+ DMARV+V+C TP+ L+ Y I+GSL DV RV+NGFN+DWMP GYRDVK+NP+VNEHLCEIQL L +F LKS QHAVY WAR+L VT+++RA+ LF LS
Sbjct: 1 MKVDIKDLIGLEAELKKSCDSATPPVVRDAKVNLLKYLQIQTVLQFEAAYDNLYYELGKEGGLECLRDIAPFRSKDFSQPKVLELHGCGDEDVRLANQLEFYLAGAELAKRRLDEIITNLADDWGRYEVQHVEVKSRESTQRKVRRFYGGDVRKVADMARVSVICLTPEDLQHVYSDIMGSL---DVRRVTNGFNNDWMPGGYRDVKMNPVVNEHLCEIQLHLGDFSVLKSDQHAVYEWARDLKVTSKMRATDLFSTLS 256
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Match: D7FXH0_ECTSI (Tetratricopeptide repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH0_ECTSI) HSP 1 Score: 305 bits (780), Expect = 1.750e-84 Identity = 163/276 (59.06%), Postives = 202/276 (73.19%), Query Frame = 3
Query: 198 MNVNIEEVLRLETELKAQGEIARSA-SLAAKVNMLKYLQVQAVAEYQTEYDGLYYELNKEGGLECLRRIAPFRSPERQQPKVLETQDCGEGDRLEKELDFYLAEAELAKQGLDELAATVTNDLRQCEVQRVSVKSRESTRRKAIRFCGGDVRKITDMARVTVMCDTPKALEQAYLAIIGSLQPQDVLRVSNGFNSDWMPSGYRDVKVNPIVNEHLCEIQLQLRNFFALKSGQHAVYTWARELDVTTEVRASHLFENLSPKGSRGDGPPGSAALAWH 1022
M+V+I E+LRLE EL+ E ++ AK+N+LK+LQ++AV +++ YD LYYELNK GGLECLR IAP R + QPKVLE QDC EG R +L+FYLA+AELAK LDEL A + +CEV VKSR T+RKA + GGDVRK+ DMAR++V+CD P+AL++AYLAI+ S Q DVLRV+NGFNSDWMPSGYRDVKVNP+V++HLCEIQL LR FF LKS QHAVY WAR+L VTT VRA +LF LS + + + G A WH
Sbjct: 1 MSVDIAELLRLEAELENSCEDCQNPYDRDAKLNLLKFLQIRAVLQFEEAYDQLYYELNKHGGLECLREIAPARPKDLLQPKVLELQDCNEGVRFAAQLEFYLADAELAKNRLDELVADIAEHTGECEVHCAEVKSRAITQRKARKSYGGDVRKVADMARISVICDNPQALKRAYLAIVESFQG-DVLRVANGFNSDWMPSGYRDVKVNPVVDDHLCEIQLHLREFFTLKSSQHAVYEWARDLKVTTIVRAENLFGVLSREIT--EEMIGLAQRNWH 273 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6934.17927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6934.17927.1 >prot_Ecto-sp13_S_contig6934.17927.1 ID=prot_Ecto-sp13_S_contig6934.17927.1|Name=mRNA_Ecto-sp13_S_contig6934.17927.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=542bp MVRLAQQHWLGTGYCLPDLYLAAGQYDMAEKSCRQEVSEREDVERGLDDHback to top mRNA from alignment at Ecto-sp13_S_contig6934:145..7794+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6934.17927.1 ID=mRNA_Ecto-sp13_S_contig6934.17927.1|Name=mRNA_Ecto-sp13_S_contig6934.17927.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7650bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6934:145..7794+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6934:145..7794+ >mRNA_Ecto-sp13_S_contig6934.17927.1 ID=mRNA_Ecto-sp13_S_contig6934.17927.1|Name=mRNA_Ecto-sp13_S_contig6934.17927.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1626bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6934:145..7794+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |