mRNA_Ecto-sp13_S_contig6916.17904.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6916.17904.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 553 bits (1424), Expect = 2.620e-193 Identity = 277/297 (93.27%), Postives = 280/297 (94.28%), Query Frame = 1
Query: 148 MGCCASLLKCCVRAETENPLLDGRYLGGVGDGPQQVDLNLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQ---ESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKGELKWRGK--GDMASSSRPVAG 1023
MGCCASLLKCCVRAETENPLLDGRYLGGVGD PQQVDLNLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQ ESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEK ++ G +M S RP G
Sbjct: 1 MGCCASLLKCCVRAETENPLLDGRYLGGVGDEPQQVDLNLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEG 297
BLAST of mRNA_Ecto-sp13_S_contig6916.17904.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA) HSP 1 Score: 199 bits (507), Expect = 8.900e-54 Identity = 107/237 (45.15%), Postives = 152/237 (64.14%), Query Frame = 1
Query: 271 FEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQESKRFVLLEYLVGGTLTESMLTRNPPA--DGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGS-FVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKGEL 972
+E+L+++ Y+T G MC IY+AE+RG +VVVK+PRDDC PE+A DLE E+++L L H +I+++LGAG R++ RF++LEYL GTL + + PP + + +++ ++ +F ++ A++LA AL YLH G+ FVVHRDLKP+NI F DG LKLFDFGLA+ V+RR R++ RY+MTGETGS RYM PEV LPYNEK ++
Sbjct: 137 WEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGL------------------REIPPY--RFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRR-ARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDV 352
BLAST of mRNA_Ecto-sp13_S_contig6916.17904.1 vs. uniprot
Match: A0A6H5L2R6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R6_9PHAE) HSP 1 Score: 182 bits (463), Expect = 1.900e-47 Identity = 109/264 (41.29%), Postives = 152/264 (57.58%), Query Frame = 1
Query: 214 GRYLGGVGDGPQQVDLN---LDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAID--------SALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKGEL 972
G+ G G Q+ + L + EL V Y+T G MC IY+AE G +V VK+PR DC +P VA DLE E+D+L+R+ H +I+ ++GAG + +Q+ RF++LE+L GTL + + + S R Q+ TKK +D +++LA AL +LH + F+VHRDLKP+N+ F DG LKLFDFGLA++V+RR R++ RYEMTGETGS RYM PEV LPYNEK ++
Sbjct: 183 GQGASSPGSGRQRENPGYRVLQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAG--------------------NREQKPHRFLVLEFLELGTLADKL--DGDAEEAANGSAFARRQKR----TKKYLDFYMVTMLERSMELALALEHLHYH-MPDMFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRR-NRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDV 418
BLAST of mRNA_Ecto-sp13_S_contig6916.17904.1 vs. uniprot
Match: A0A6H5JJI7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI7_9PHAE) HSP 1 Score: 181 bits (458), Expect = 2.980e-46 Identity = 103/248 (41.53%), Postives = 143/248 (57.66%), Query Frame = 1
Query: 232 VGDGPQ-QVDLNLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKGEL 972
+ D P+ ++D N+ ++++ ++YL G MC YTA G++VV+K P D + VA DLE E+ +L+ L H NIV +LGAGF+ PDG +RFV LEYL GGTL SS++R ++ K +D +L L +AL YLH A+ G V HRDLKP+NI F+ DG LKL DFGL KI++R+ +++Y MTG TGS RYM PE+A YNEKG++
Sbjct: 374 IPDAPKREIDTNIPVKQIQSLKYLAQGAMCVAYTALLNGQKVVLKTPLPDTSHAAVAANDLEVEMLLLKELHHDNIVSLLGAGFL------PDG---------------RRFVALEYLSGGTL---------------SSLLREHREK-PMRISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLRYMAPEIANHQEYNEKGDV 584
BLAST of mRNA_Ecto-sp13_S_contig6916.17904.1 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI) HSP 1 Score: 173 bits (438), Expect = 1.340e-45 Identity = 100/233 (42.92%), Postives = 139/233 (59.66%), Query Frame = 1
Query: 298 LTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAID--------SALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKGEL 972
+T G MC IY+AE G +V VK+PR DC +P VA DLE E+D+L+R+ H +I+ ++GAG + +Q+ RF++LE+L GTL + + + S R Q+ TKK +D +++LA AL +LH + F+VHRDLKP+N+ F DG LKLFDFGLA++V+RR R++ RYEMTGETGS RYM PEV LPYNEK ++
Sbjct: 1 MTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAG--------------------NREQKPHRFLVLEFLELGTLADKL--DGDAEEAANGSAFARRQKR----TKKYLDFYMVTMLERSMELALALEHLHYH-MPDMFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRR-NRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDV 205
BLAST of mRNA_Ecto-sp13_S_contig6916.17904.1 vs. uniprot
Match: A0A6V1S4W8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S4W8_HETAK) HSP 1 Score: 172 bits (435), Expect = 1.110e-43 Identity = 106/246 (43.09%), Postives = 139/246 (56.50%), Query Frame = 1
Query: 247 QQVDLNLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAF----SGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKGEL 972
++VD +L + L D ++L NGG C+IYTA+++ VVVKM +DD E AR DLE E+ L RL+HPN+VE+ GAGF NP +RF++LE L GGTLTE G S + ++ F + + A Q A+AL YLH AI G +HRDLKP NI F +G LKL DFGLAK V R G Q Y+++G+TGS RYM PEV +PYNEK ++
Sbjct: 216 KEVDTDLSWALLDDARFLANGGFCTIYTAQFKHLPVVVKMLKDDRLDMEAARADLEAEMHFLLRLRHPNVVEIYGAGF-NP----------------------ERFIVLERLDGGTLTE--------VGGGASHGIGPMKKRKPFSYLETLQYARQFAAALRYLHEDAIPGYVTIHRDLKPGNIGFKLLPNGGMVLKLMDFGLAKSVPR-GEAAGQTYQLSGDTGSVRYMAPEVMQSIPYNEKCDI 429
BLAST of mRNA_Ecto-sp13_S_contig6916.17904.1 vs. uniprot
Match: A0A835YS35_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS35_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.310e-43 Identity = 101/269 (37.55%), Postives = 147/269 (54.65%), Query Frame = 1
Query: 232 VGDGPQQVDLNLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPT-KKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRG-GRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKGE------LKWRGKGDMASSSRP 1014
V P ++ N+ F+ + +++L +GGMC +Y+ V+K + ++A +DL+TE+ ++Q L HPNIV++ GAG L E F+ +E L GGTL + T G+ V RW + T + A+ A +ASA+SY+H RA+ G+ ++HRDLK N+AF+ DG LKLFDFGLAKI+R R S RY++TG TGS RYM PEVA++ PYNE + L W ++AS RP
Sbjct: 27 VSHVPPELSFNIPFDSVSHLKHLADGGMCHVYSGILGHTPCVLKQDK-----LQLASRDLDTELQVMQVLDHPNIVKLYGAG---------------------LTPEGLTFICMEALSGGTLAHYLGTAGSHEGGL--GAVGRWLTRHLYMTLEDALRHAQGIASAISYMHTRAMPGAAIMHRDLKSSNLAFAADGTLKLFDFGLAKILRERDRADCSDRYKLTGNTGSLRYMAPEVALEQPYNETADVYSFSILLW----ELASLQRP 263
BLAST of mRNA_Ecto-sp13_S_contig6916.17904.1 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.140e-43 Identity = 94/240 (39.17%), Postives = 136/240 (56.67%), Query Frame = 1
Query: 253 VDLNLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKGEL 972
+LN+ + L++++YLT+GG I+TA G+ VVVK + +C +A ++E E+D+ RL H NIV ++GAG L + RFV+LE L GGTLT+ + D + RR+ + Q + ++ A LA AL Y HG+A+ G+ V+HRD+KP+NI F+ DG LKL DFGLAK+V + Y ++GETGS RYM PEVA PYN K ++
Sbjct: 42 ANLNMKWNSLQNIEYLTDGGNSWIHTAVVNGKSVVVKTLKPECQDMAMAINEIEAELDVHARLSHENIVALVGAG---------------------LTSKGVRFVVLERLDGGTLTQVL-----GYDTRIRDRRRRFFKRKQLSYLEVLNHARSLADALGYCHGKAVPGTLVLHRDVKPDNIGFTIDGTLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLRYMAPEVADNRPYNHKADV 255
BLAST of mRNA_Ecto-sp13_S_contig6916.17904.1 vs. uniprot
Match: A0A6H5J869_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J869_9PHAE) HSP 1 Score: 164 bits (414), Expect = 5.510e-43 Identity = 100/250 (40.00%), Postives = 142/250 (56.80%), Query Frame = 1
Query: 241 GPQQVDLNLDFEELRDVQYLTNGGMCSIYTAEWRG-----RRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGR-LKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKGEL 972
GP +VDL + FEE+ D++ L +G C+ + G +RV +K + + + KDL+ E+ ILQ L+HPN+V + GAG P+GG RFV E L GGTL+ ++ T++ P + +R++ FP +A+ A +ASAL+YLH A+ G+ V+HRD+KP N+AF+GD R LKLFDFGLAK++R Y MTG TGS RYM PEVA LP NE ++
Sbjct: 31 GPWEVDLAIPFEEITDIRPLADGTGCTCWQGSLGGNDEGNKRVAIKTLKASNSTSDSDAKDLDRELSILQHLRHPNVVRLAGAG------QSPEGG---------------RFVATELLSGGTLSAAIGTQDRPEG---TGWFQRFRVRTWFPMDEALRQAAGVASALAYLHDEAVPGAKVLHRDIKPNNLAFTGDFRTLKLFDFGLAKMLRPDDSIGDNLYTMTGNTGSMRYMAPEVARNLPANETADV 256
BLAST of mRNA_Ecto-sp13_S_contig6916.17904.1 vs. uniprot
Match: A0A836C8Q0_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Q0_9STRA) HSP 1 Score: 169 bits (427), Expect = 5.810e-43 Identity = 99/260 (38.08%), Postives = 143/260 (55.00%), Query Frame = 1
Query: 250 QVDLNLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKGELKWRGK--GDMASSSRPVAG 1023
+ +L++ ++ L+D ++L NG C+IYTA ++ V VK+ R D + +L E DIL RL HPNIV+++GAG + +RF+++E L GGTL + + D RR++ F + + A QLA AL Y+H A+ G V+HRDLKP+NIAF G G LK+ D GLAK+V G + Y+MTGETGS RYM PEVA++ PYN K ++ G +MA+ +P G
Sbjct: 187 EPNLDMRWDSLQDAEFLVNGSRCTIYTAFYKNLPVAVKLVRKDIPDKKTVYGELNMETDILMRLHHPNIVKLIGAGT-----------------------QPERFMVIERLDGGTLAQRCGSALNIRDRR-----RRFRTKTPFTYLELVTCARQLAHALRYMHTEAVPGCMVIHRDLKPDNIAFDGMGNLKILDMGLAKVVPLADGDPTAVYKMTGETGSLRYMAPEVALRKPYNGKADVYGFGMILWEMAAMRKPFEG 418 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6916.17904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6916.17904.1 >prot_Ecto-sp13_S_contig6916.17904.1 ID=prot_Ecto-sp13_S_contig6916.17904.1|Name=mRNA_Ecto-sp13_S_contig6916.17904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp MGCCASLLKCCVRAETENPLLDGRYLGGVGDGPQQVDLNLDFEELRDVQYback to top mRNA from alignment at Ecto-sp13_S_contig6916:124..6484- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6916.17904.1 ID=mRNA_Ecto-sp13_S_contig6916.17904.1|Name=mRNA_Ecto-sp13_S_contig6916.17904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6361bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6916:124..6484- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6916:124..6484- >mRNA_Ecto-sp13_S_contig6916.17904.1 ID=mRNA_Ecto-sp13_S_contig6916.17904.1|Name=mRNA_Ecto-sp13_S_contig6916.17904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=891bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6916:124..6484- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |