prot_Ecto-sp13_S_contig101504.179.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig101504.179.1
Unique Nameprot_Ecto-sp13_S_contig101504.179.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length82
Homology
BLAST of mRNA_Ecto-sp13_S_contig101504.179.1 vs. uniprot
Match: A0A6H5J9J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9J1_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 7.890e-41
Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0
Query:    1 QANLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVARDGCKEKV 74
            +ANLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVA+DGCKEKV
Sbjct:  560 RANLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVAQDGCKEKV 633          
BLAST of mRNA_Ecto-sp13_S_contig101504.179.1 vs. uniprot
Match: W7TJD8_9STRA (Atp-dependent rna helicase ddx1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJD8_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.210e-29
Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 0
Query:    3 NLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVARDGCKEKV 74
            NL AFK+GDVRFLICTDVAARG+DI+ LP+VIN TLPD  ENYIHR+GRVGR DCLGLA+S+VA  G +EKV
Sbjct:  580 NLQAFKEGDVRFLICTDVAARGIDIQNLPFVINYTLPDAVENYIHRVGRVGRADCLGLAISLVAASGYQEKV 651          
BLAST of mRNA_Ecto-sp13_S_contig101504.179.1 vs. uniprot
Match: A0A7S2WVU8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVU8_9STRA)

HSP 1 Score: 116 bits (291), Expect = 9.830e-29
Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 0
Query:    3 NLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVA 66
            NL AFK+GDVRFLICTDVAARG+DI+GLPYV+N+TLPDVPENYIHRIGRVGR D +GLAVS+VA
Sbjct:  303 NLAAFKEGDVRFLICTDVAARGIDIQGLPYVVNVTLPDVPENYIHRIGRVGRADRMGLAVSLVA 366          
BLAST of mRNA_Ecto-sp13_S_contig101504.179.1 vs. uniprot
Match: A0A183T7I9_SCHSO (Helicase C-terminal domain-containing protein n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183T7I9_SCHSO)

HSP 1 Score: 112 bits (279), Expect = 1.010e-28
Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    1 QANLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVARDGCKEKV 74
            +ANL  FK+GDV FLICTDVAARG+DI GLPYVIN+TLPD  ENY+HRIGRVGR + +GLA+S+VA   CKEKV
Sbjct:  107 KANLQKFKNGDVNFLICTDVAARGLDITGLPYVINVTLPDEKENYVHRIGRVGRAERMGLAISLVA--ACKEKV 178          
BLAST of mRNA_Ecto-sp13_S_contig101504.179.1 vs. uniprot
Match: A0A7S0HCK1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HCK1_9CRYP)

HSP 1 Score: 108 bits (270), Expect = 5.240e-28
Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    4 LDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVARDG-----CKEKVQG 76
            + AFKDGDVRFLI TDVAARG+DI GLPYV+NMTLPDV  NY+HRIGRVGR D +GLA+S VA +      C++ V+G
Sbjct:    1 MQAFKDGDVRFLIATDVAARGIDISGLPYVVNMTLPDVAANYVHRIGRVGRADKMGLAISFVATEKERVWFCQKNVKG 78          
BLAST of mRNA_Ecto-sp13_S_contig101504.179.1 vs. uniprot
Match: A0A0R3SKL4_HYMDI (Uncharacterized protein n=2 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A0R3SKL4_HYMDI)

HSP 1 Score: 111 bits (278), Expect = 1.230e-27
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    1 QANLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVARDGCKEKV 74
            +ANL  FKDG+V FLICTDVAARG+DI GLPYVIN+TLPD  +NY+HRIGRVGR + +GLA+S+VA   CKEKV
Sbjct:  292 KANLQRFKDGEVNFLICTDVAARGIDITGLPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT--CKEKV 363          
BLAST of mRNA_Ecto-sp13_S_contig101504.179.1 vs. uniprot
Match: A0A482T3W9_9ARCH (DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3W9_9ARCH)

HSP 1 Score: 108 bits (269), Expect = 2.320e-27
Identity = 49/72 (68.06%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    3 NLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVARDGCKEKV 74
            NL  FKDG+++FLICTDVAARG+D+  LPYVIN+TLPD P++Y+HR+GR GR D +GLA+SIVA D  KEKV
Sbjct:   51 NLQRFKDGEIKFLICTDVAARGIDVDSLPYVINVTLPDQPDDYVHRVGRAGRADRMGLAISIVAMDN-KEKV 121          
BLAST of mRNA_Ecto-sp13_S_contig101504.179.1 vs. uniprot
Match: A0A7S0T1I6_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T1I6_9CHLO)

HSP 1 Score: 112 bits (280), Expect = 2.940e-27
Identity = 51/64 (79.69%), Postives = 60/64 (93.75%), Query Frame = 0
Query:    3 NLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVA 66
            NL AFK+GDVRF+ICTDVAARG+DIKGLP+VINMTLPD PE+YIHRIGRVGR D +GLA+S+V+
Sbjct:  338 NLQAFKEGDVRFMICTDVAARGLDIKGLPFVINMTLPDRPEDYIHRIGRVGRADTMGLAISLVS 401          
BLAST of mRNA_Ecto-sp13_S_contig101504.179.1 vs. uniprot
Match: A0A8J4TNC2_9TREM (ATP-dependent RNA helicase DDX1 n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4TNC2_9TREM)

HSP 1 Score: 109 bits (272), Expect = 4.360e-27
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    1 QANLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVARDGCKEKV 74
            +ANL  FK+GDVRFLICTDVAARG+DI GLPYVIN+TLPD  +NY+HRIGRVGR + +GLA+S+VA    KEKV
Sbjct:  136 KANLQKFKNGDVRFLICTDVAARGIDIAGLPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT--VKEKV 207          
BLAST of mRNA_Ecto-sp13_S_contig101504.179.1 vs. uniprot
Match: A0A8J1XQR3_OWEFU (Ofus.G062670 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XQR3_OWEFU)

HSP 1 Score: 107 bits (268), Expect = 5.880e-27
Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 QANLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVARDGCKEKV 74
            + NL+ FK G+V+FLICTDVAARG+DI GLP+VIN+TLPD  +NY+HRIGRVGR + +GLA+S+VA+  CKEKV
Sbjct:   79 KGNLERFKRGEVKFLICTDVAARGIDITGLPFVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAQ--CKEKV 150          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig101504.179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9J1_9PHAE7.890e-4197.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TJD8_9STRA1.210e-2976.39Atp-dependent rna helicase ddx1 n=2 Tax=Monodopsid... [more]
A0A7S2WVU8_9STRA9.830e-2984.38Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A183T7I9_SCHSO1.010e-2872.97Helicase C-terminal domain-containing protein n=1 ... [more]
A0A7S0HCK1_9CRYP5.240e-2866.67Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A0R3SKL4_HYMDI1.230e-2771.62Uncharacterized protein n=2 Tax=Hymenolepis diminu... [more]
A0A482T3W9_9ARCH2.320e-2768.06DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906... [more]
A0A7S0T1I6_9CHLO2.940e-2779.69Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A8J4TNC2_9TREM4.360e-2771.62ATP-dependent RNA helicase DDX1 n=1 Tax=Paragonimu... [more]
A0A8J1XQR3_OWEFU5.880e-2767.57Ofus.G062670 protein n=1 Tax=Owenia fusiformis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 1..56
e-value: 1.0E-6
score: 38.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 3..54
e-value: 3.1E-17
score: 62.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..81
score: 13.248
NoneNo IPR availableGENE3D3.40.50.300coord: 1..79
e-value: 4.6E-24
score: 86.8
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..68
NoneNo IPR availablePANTHERPTHR24031:SF307ATP-DEPENDENT RNA HELICASE DDX1coord: 1..68
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig101504contigEcto-sp13_S_contig101504:154..399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig101504.179.1mRNA_Ecto-sp13_S_contig101504.179.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig101504 154..399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig101504.179.1 ID=prot_Ecto-sp13_S_contig101504.179.1|Name=mRNA_Ecto-sp13_S_contig101504.179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=82bp
QANLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIG
RVGRQDCLGLAVSIVARDGCKEKVQGVRNEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase