prot_Ecto-sp13_S_contig69129.17899.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69129.17899.1
Unique Nameprot_Ecto-sp13_S_contig69129.17899.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length56
Homology
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BLAST of mRNA_Ecto-sp13_S_contig69129.17899.1 vs. uniprot
Match: A0A6H5KKC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC6_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.100e-17
Identity = 49/56 (87.50%), Postives = 51/56 (91.07%), Query Frame = 0 
Query:    1 MRTRKRDVLRKIIFGKSVPNKNRAASRANTKGGGGEVEDTGGSAVAWGGTPALPSG 56
            MRTRKRD+LR I+FGKSVP KN AASRANTKGGG EVEDTGGSAVAWGGT ALPSG
Sbjct:  440 MRTRKRDMLRNILFGKSVP-KNSAASRANTKGGG-EVEDTGGSAVAWGGTHALPSG 493
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BLAST of mRNA_Ecto-sp13_S_contig69129.17899.1 vs. uniprot
Match: D7FPD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD3_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.640e-16
Identity = 45/56 (80.36%), Postives = 48/56 (85.71%), Query Frame = 0 
Query:    1 MRTRKRDVLRKIIFGKSVPNKNRAASRANTKGGGGEVEDTGGSAVAWGGTPALPSG 56
            MRTRKRDVLRKIIF K  P  N+AASRANTKGGGGEVE+ GGSAVA GGT ALP+G
Sbjct:  249 MRTRKRDVLRKIIFRKPGPKNNKAASRANTKGGGGEVENAGGSAVAGGGTQALPAG 304
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69129.17899.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKC6_9PHAE1.100e-1787.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPD3_ECTSI1.640e-1680.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69129contigEcto-sp13_S_contig69129:48..647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69129.17899.1mRNA_Ecto-sp13_S_contig69129.17899.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69129 48..666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69129.17899.1 ID=prot_Ecto-sp13_S_contig69129.17899.1|Name=mRNA_Ecto-sp13_S_contig69129.17899.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp
MRTRKRDVLRKIIFGKSVPNKNRAASRANTKGGGGEVEDTGGSAVAWGGT
PALPSG
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