mRNA_Ecto-sp13_S_contig6909.17895.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6909.17895.1
Unique NamemRNA_Ecto-sp13_S_contig6909.17895.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6909.17895.1 vs. uniprot
Match: D8LN11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN11_ECTSI)

HSP 1 Score: 1977 bits (5123), Expect = 0.000e+0
Identity = 1124/1301 (86.40%), Postives = 1150/1301 (88.39%), Query Frame = 1 
Query:    4 MFDMLDSERQGRVLESDLFKHLLPLLEKTGLCSPLRKESTGRRKSSVKGSVPRRPRPSAARPSGPKIPPRPAGTPPATAKRRITSPTTGGVRRETFSAAPTTANQTSSSPSNGSSQGPKRDSAASADGLNRTLSPGYLRERPSKFWVTPEHGGGGDPPASGQFAPLVDRVDPVESRTAXXXXXXXXXXXXXXELGLKRNNETENVSGAKGNSHHQTESEQGKEATVTTGRAENGTNRQAEEQAGGISGAATEEAKELAPSGDLDAEPAVDPLAGKDVLEWTAADVRTWIRALPRGLATFAEAEAFAKGRVDGKKLATLKLSDIKRKEFRHAKFKAKIPTALWVEIKRIQQTVPTPVTAMTVAAAAATTAAVLPSRFSPGQTIVDEAVNTPLCTVKQSVGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGRSLEELVAEGEGELYDGTPAEIQGRLLSYSIQLARGLGHIHRCGVLHQDIKPANIMVSNDAGLLITDFGFATVGQFGPPPQLPAEKPTSVPALDATAAGVEPVGEGLEKGCGCDKASPSGNPQGGVDTGSGNEPQGPSGWIPGYSDSGGPHTSASENRCCGSMERDMIAAEGRQQARTAAGGSAEQAQVPHSCPVVGTGAGPPLITKVSPATAPAEPAGRRSPLAGNGGGPCSAGKEVMDGTGGASGLLQQNGDNGRPPNRYSVLFSTLRGYTPRYQSPEVSAIIKKKDXXXXAVM--------QEGGRSMKIGAQQHPSASRSEKNHDMVDAWSSQFSHRSDMWAAGVVVLEMYAGGLGNLPAGQGDNALELLETLVRNTVGHDGGHKNCASADGEDKTKKGRDTFLVDMPEGVLAVLREVFQRTAGNRPFSMEALAARLSETLGGMLEKKLAVVPCPSAGAPSSSSLCEQAPVYVECDENHAKVGRLHMWLGKALFLKGDDRREQAMQEYREGVRVLLESEAERRSPSMALFRWYLGKALLENGEIDEALPHLAESVSIDPENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQLRMQRIDEKRRKNAEEEQQRVSRSLQESEGAGTPQGAASPKPGDAEESGTPLAVTTPSDEPTAAMSGFAQSRLLALERASSSTRTYALENLSDYRNHKLAGKLIGDTWGSGGGVTHPIDYSFGDKNTRDVATLAEVRRFSVGDEISGGPDMSASGKPLQPLHCCGFSSPYDDTRVDTGIDGKFVICGLLSPGQASLHIPGEAYTATRST 3882
            MFDMLDSERQGRVLESDLFKH LPLLEKTGL  P RKESTGRRKSSVKG                                                                   GPKR+SAASADGLNRTLSPGYLRERPSKFWVTPEHGGGGDPPASG FAPL DRVDPVESRTAXXXXXXXXXXXXXXELG++RNNET+NVSG KG SHHQTESEQGKEATVTTGRAENGTNRQAEEQAGG SGAATEEAKE   SGD DAEPAVDPLAGKDVLEWTAADVRTWIRALPRGLATFAEAEAFAKGRVDGKKLATL LSDIKRKEFRHAKFKAKIPTALWVEIKRIQQTVPTPVTA+TVAA AATTAA LPSRFSPGQTIVDEAVNTPLCTVKQSVGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTG+SLEELVAEGEGELYDGTPAE                           DIK ANIMVSNDAGLLITDFGFATVGQFGPPPQLPAEK T+VPA+ +TAAGVEPVGEGLEKGCGC K+SPSGNPQ GVDTGSGNEP+ PSGWIPGYS+SGGPHTSAS NRCCGSMERDM AAEGRQ+ARTAAGGSAEQAQV HSCPVVGTGAGPP+ITKVSPATA AEPAGRRSPLAGNGGGP  AGKE+MDG+GG SGLLQQNGD GRPPNR SVL  TL+GYTPRYQSPEVSAI+K   XXXX           QEGGRSMKIGAQQHP ASRSEKNHD VDAW SQFSHRSDMWAAGVVVLEMYAGGLGNLPAGQG+NALELLETLVRNTVGHDGG +NCASADGEDKTKKGRDTFLVDMPEGVLAVLREVFQRTAGNRPFSMEALAARLSETLGGMLEKKLAVVPCPSAGAPSSSSLCEQAPVYVECDENHAKVGRLHMWLGKALFLKGDDRREQA+QEYREGVRVLLESEAERRSPSMALFRWYLGKALLENGEIDEALPHLAESVSIDPENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQLRM RIDEKRRK+AEEEQQRVSRSLQESEGAGTPQGAASPKPGDAEESGTPLA TTPSDEPTAAMSGFAQSRLLALERASSSTRTYALENLSDYRNHKLAGKLIGDTWGSGGGV HPIDYSFGDKNTRD ATLAEVRRFSVGDEI GGPD+SASGKPL+PLHCCGFSSPYDDTRVDT +DG+FVICGLLSPGQASLHIPGEAYTATRST
Sbjct:    1 MFDMLDSERQGRVLESDLFKHFLPLLEKTGLSGPPRKESTGRRKSSVKG-------------------------------------------------------------------GPKRNSAASADGLNRTLSPGYLRERPSKFWVTPEHGGGGDPPASGPFAPLQDRVDPVESRTAXXXXXXXXXXXXXXELGVERNNETKNVSGTKGTSHHQTESEQGKEATVTTGRAENGTNRQAEEQAGGTSGAATEEAKEAVASGDSDAEPAVDPLAGKDVLEWTAADVRTWIRALPRGLATFAEAEAFAKGRVDGKKLATLTLSDIKRKEFRHAKFKAKIPTALWVEIKRIQQTVPTPVTAVTVAAVAATTAAALPSRFSPGQTIVDEAVNTPLCTVKQSVGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGKSLEELVAEGEGELYDGTPAE---------------------------DIKSANIMVSNDAGLLITDFGFATVGQFGPPPQLPAEKSTAVPAIASTAAGVEPVGEGLEKGCGCGKSSPSGNPQSGVDTGSGNEPEVPSGWIPGYSESGGPHTSASGNRCCGSMERDMSAAEGRQEARTAAGGSAEQAQVQHSCPVVGTGAGPPVITKVSPATAAAEPAGRRSPLAGNGGGPGGAGKEIMDGSGGGSGLLQQNGDGGRPPNRDSVLLGTLKGYTPRYQSPEVSAIMKXXXXXXXXXXXXXXXXXXQEGGRSMKIGAQQHPPASRSEKNHDTVDAWRSQFSHRSDMWAAGVVVLEMYAGGLGNLPAGQGENALELLETLVRNTVGHDGGRRNCASADGEDKTKKGRDTFLVDMPEGVLAVLREVFQRTAGNRPFSMEALAARLSETLGGMLEKKLAVVPCPSAGAPSSSSLCEQAPVYVECDENHAKVGRLHMWLGKALFLKGDDRREQALQEYREGVRVLLESEAERRSPSMALFRWYLGKALLENGEIDEALPHLAESVSIDPENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQLRMHRIDEKRRKSAEEEQQRVSRSLQESEGAGTPQGAASPKPGDAEESGTPLAATTPSDEPTAAMSGFAQSRLLALERASSSTRTYALENLSDYRNHKLAGKLIGDTWGSGGGVAHPIDYSFGDKNTRDAATLAEVRRFSVGDEIVGGPDISASGKPLEPLHCCGFSSPYDDTRVDTEVDGRFVICGLLSPGQASLHIPGEAYTATRST 1207
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6909.17895.1 vs. uniprot
Match: A0A7W9HD96_9ACTN (Non-specific serine/threonine protein kinase n=1 Tax=Streptomyces caelestis TaxID=36816 RepID=A0A7W9HD96_9ACTN)

HSP 1 Score: 98.6 bits (244), Expect = 1.220e-17
Identity = 64/174 (36.78%), Postives = 92/174 (52.87%), Query Frame = 1 
Query: 1183 VKQSVGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGRSLEELVAEGEGELYDGTPAEIQGRLLSYSIQLARGLGHIHRCGVLHQDIKPANIMVSNDAGLLITDFGFATVGQFGPPP 1704
            V  ++GQG  G V++V   G G+D    LA+K+ R  ++  DE D+ R   V E    V ++ HP++    +   +G          F ++V G SL E +   EG LY G   E+ GR+L  +IQ+ARGL H H  GV+HQD+KP N+++       ITDFG A    FG  P
Sbjct:   27 VTGALGQGGMGLVHRVRHLGWGTD----LAVKSPR-PELFRDEADKER--FVREAETWVGLELHPHLCGCHYVRTIGGVPR-----VFAEYVNGGSLRESI--DEGRLYRGAREEVVGRILDIAIQMARGLAHAHLSGVVHQDVKPGNVLLDRQGTAKITDFGLARARHFGTRP 186
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6909.17895.1 vs. uniprot
Match: A0A354WCX3_9CYAN (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Planktothrix sp. UBA10369 TaxID=2055760 RepID=A0A354WCX3_9CYAN)

HSP 1 Score: 99.0 bits (245), Expect = 2.280e-17
Identity = 65/190 (34.21%), Postives = 103/190 (54.21%), Query Frame = 1 
Query: 1117 LPSRFSPGQTIVDEAVNTPLCTVKQSVGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGRSLEELVAEGEGE---LYDGTPAEIQGRLLSYSIQLARGLGHIHRCGVLHQDIKPANIMVSNDAGLLITDFGFA 1677
            +P ++  GQ+IVD      L  V+  +GQG FG+VY+V+ TG       +LA+KT ++  ++  E + +    + E    V++  HP++V   +   +G          F +FV G SL + +   EGE   LY G  AE   R+L  +IQ A GL + H  G++HQD+KP+N M++ D  + +TDFG A
Sbjct:   33 VPDQWQVGQSIVD------LYNVEADIGQGGFGQVYKVLHTGWNI----SLAVKTPKVDKLTEKEVENF----IREAETWVKLGLHPHIVTCFYVRKLGKSPR-----VFAEFVGGGSLHDWIYSKEGEIPRLYQGRQAESFRRILDIAIQFAWGLHYSHEQGLIHQDVKPSNTMMTADGTVKVTDFGLA 203
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6909.17895.1 vs. uniprot
Match: H2JUZ2_STRHJ (Non-specific serine/threonine protein kinase n=11 Tax=Streptomyces TaxID=1883 RepID=H2JUZ2_STRHJ)

HSP 1 Score: 97.4 bits (241), Expect = 1.370e-16
Identity = 69/202 (34.16%), Postives = 101/202 (50.00%), Query Frame = 1 
Query: 1183 VKQSVGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGRSLEELVAEGEGELYDGTPAEIQGRLLSYSIQLARGLGHIHRCGVLHQDIKPANIMVSNDAGLLITDFGFATVGQFGPPPQLPAEKPTSVPALDATAAGVEPVGEGLE 1788
            V  ++GQG  G V++V   G G+D    LA+K+ R  ++  DE D+ R   V E    V ++ HP++    +   +G          F ++V G SL E +   +G LY G   E+ GR+L  ++Q+ARGL H H  GV+HQD+KP N+++       ITDFG A    FG        +PT     D  A G  P G  L+
Sbjct:   27 VTGALGQGGMGRVHRVRHLGWGTD----LAVKSPR-PELFRDEADQER--FVREAETWVGLELHPHLCGCHYVRTIGGVPR-----VFAEYVDGGSLRESI--DDGRLYRGARDEVVGRILDIAVQMARGLAHAHLSGVVHQDVKPGNVLLDRRGTAKITDFGLARARHFG-------TRPTP---SDRVADGAAPGGAALD 204
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6909.17895.1 vs. uniprot
Match: A0A6J7ZKI8_PLARU (Non-specific serine/threonine protein kinase n=1 Tax=Planktothrix rubescens NIVA-CYA 18 TaxID=329571 RepID=A0A6J7ZKI8_PLARU)

HSP 1 Score: 97.1 bits (240), Expect = 1.910e-16
Identity = 64/190 (33.68%), Postives = 102/190 (53.68%), Query Frame = 1 
Query: 1117 LPSRFSPGQTIVDEAVNTPLCTVKQSVGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGRSLEELVAEGEGE---LYDGTPAEIQGRLLSYSIQLARGLGHIHRCGVLHQDIKPANIMVSNDAGLLITDFGFA 1677
            +P ++  GQ+IVD      L  V+  +GQG FG+VY+V+ TG       +LA+KT ++  ++  E + +    + E    V++  HP++V   +   +G          F +FV G SL + +   +GE   LY G  AE   R+L  +IQ A GL + H  G++HQD+KP N M++ D  + +TDFG A
Sbjct:   33 VPDQWQVGQSIVD------LYNVEADIGQGGFGQVYKVLHTGWNI----SLAVKTPKVDKLTEKEVENF----IREAETWVKLGLHPHIVTCFYVRKLGKSPR-----VFAEFVGGGSLHDWIYSKDGEIPRLYQGGQAESFRRILDIAIQFAWGLHYSHEQGLIHQDVKPGNTMMTADGTVKVTDFGLA 203
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6909.17895.1 vs. uniprot
Match: D5ZVG1_STRV1 (Non-specific serine/threonine protein kinase (Fragment) n=2 Tax=Streptomyces viridosporus TaxID=67581 RepID=D5ZVG1_STRV1)

HSP 1 Score: 94.7 bits (234), Expect = 8.370e-16
Identity = 61/171 (35.67%), Postives = 90/171 (52.63%), Query Frame = 1 
Query: 1183 VKQSVGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGRSLEELVAEGEGELYDGTPAEIQGRLLSYSIQLARGLGHIHRCGVLHQDIKPANIMVSNDAGLLITDFGFATVGQFG 1695
            V  ++GQG  G V++V   G G+D    LA+K+ R  ++  D+ D+ R   V E    V ++ HP++    +   +           F ++V G SL E +   EG LY G   E+ GR+L  +IQ+ARGL H H  GV+HQD+KP N+++       ITDFG A    FG
Sbjct:   75 VTGALGQGGMGVVHRVRHLGWGTD----LAVKSPR-PELFGDKADKER--FVREAETWVGLELHPHLCGCHYVRTIDGVPR-----VFAEYVNGGSLRESI--DEGRLYRGAREEVVGRILDIAIQMARGLAHAHLSGVVHQDVKPGNVLLDRQGTAKITDFGLARARHFG 231
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6909.17895.1 vs. uniprot
Match: UPI001892452B (serine/threonine-protein kinase n=4 Tax=Catenulispora TaxID=414878 RepID=UPI001892452B)

HSP 1 Score: 92.4 bits (228), Expect = 4.420e-15
Identity = 61/161 (37.89%), Postives = 87/161 (54.04%), Query Frame = 1 
Query: 1195 VGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGRSLEELVAEGEGELYDGTPAEIQGRLLSYSIQLARGLGHIHRCGVLHQDIKPANIMVSNDAGLLITDFGFA 1677
            +G+G  GEV++V   G G D    LAMK+  L  +  D     R   V E  A V + PHPNVV   +  ++           F ++V G  LE+ +  GEG LY G+   +  R+L ++IQ A GL   H  G++HQD+KP+N+MV+ D  L +TDFG A
Sbjct:   19 LGRGGMGEVHRVRHLGWGID----LAMKSA-LPGVLHDAAA--RESFVREAEAWVTLDPHPNVVACHYVRMIEGVPR-----IFAEYVAGSDLEQWI--GEGRLYQGSQESVLARILDFAIQAAWGLAAAHGQGLVHQDVKPSNMMVAGDDTLKVTDFGLA 165
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6909.17895.1 vs. uniprot
Match: A0A6G5RRK3_9ACTN (Non-specific serine/threonine protein kinase n=1 Tax=Streptomyces hawaiiensis TaxID=67305 RepID=A0A6G5RRK3_9ACTN)

HSP 1 Score: 91.7 bits (226), Expect = 8.010e-15
Identity = 61/171 (35.67%), Postives = 88/171 (51.46%), Query Frame = 1 
Query: 1183 VKQSVGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGRSLEELVAEGEGELYDGTPAEIQGRLLSYSIQLARGLGHIHRCGVLHQDIKPANIMVSNDAGLLITDFGFATVGQFG 1695
            V  ++GQG  G V++V   G  +D    LA+K+ R  ++  DE D  R   V E    V ++ HP++    +   +           F ++V G SL E +   EG LY G   E+ GR+L  +IQ+ARGL H H  GV+HQD+KP N+++       ITDFG A    FG
Sbjct:   27 VTGALGQGGMGLVHRVRHLGWDTD----LAVKSPR-PELFRDEADRQR--FVREAETWVGLELHPHLCGCHYVRTIDGVPR-----VFAEYVNGGSLRESI--DEGRLYRGARDEVLGRILDIAIQMARGLAHAHLSGVVHQDVKPGNVLLDRQGTAKITDFGLARARLFG 183
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6909.17895.1 vs. uniprot
Match: UPI0003494A8A (protein kinase n=1 Tax=Nocardiopsis chromatogenes TaxID=280239 RepID=UPI0003494A8A)

HSP 1 Score: 90.9 bits (224), Expect = 1.320e-14
Identity = 66/181 (36.46%), Postives = 92/181 (50.83%), Query Frame = 1 
Query: 1183 VKQSVGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGRSLEELVAEGEGELYDGTPAEIQGRLLSYSIQLARGLGHIHRCGVLHQDIKPANIMVSNDAGLLITDFGFATVGQFGPPPQLPAEKP 1725
            V Q  GQGA G V++V   G G+D    LA+K+ R  ++ +D     R   + E  A V +  HPNV    +  ++           F ++V G SL + +   +G LY G P  +  R+L  +IQ ARGL H H  G++HQD+KPANI+V  D    ITDFG A   +  PP   P   P
Sbjct:   19 VAQVHGQGAMGLVHRVRHLGWGAD----LAVKSPR-PEMFTDASGRAR--FIAEAEAWVGLGLHPNVCACHYVRVLDGIPR-----VFAEYVRGGSLRDRI--DDGRLYAGGPRRVLARVLDLAIQAARGLDHAHSKGLVHQDVKPANILVDEDGTAKITDFGLARA-RTAPPASGPGPAP 184
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6909.17895.1 vs. uniprot
Match: A0A810NWL5_9ACTN (Non-specific serine/threonine protein kinase n=2 Tax=Catellatospora TaxID=53365 RepID=A0A810NWL5_9ACTN)

HSP 1 Score: 90.9 bits (224), Expect = 1.340e-14
Identity = 58/161 (36.02%), Postives = 86/161 (53.42%), Query Frame = 1 
Query: 1204 GAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGRSLEELVAEGEGELYDGTPAEIQGRLLSYSIQLARGLGHIHRCGVLHQDIKPANIMVSNDAGLLITDFGFATVG 1686
            G  G VY+V   G  +D    LA+K+ R   + + E D+ R   V+E  A + +  HPNV    +   +           F ++V G SL E +   +G LY+G P E+  RLL  ++QLA GL H HR G++HQD+KPAN+++       +TDFG + VG
Sbjct:   32 GGMGLVYRVRHLGWDAD----LALKSPRPQQLRTAE-DQQR--FVDEAQAWISLGLHPNVCAAHYVRAVDGVPR-----VFAEYVPGGSLREAI--DDGRLYEGAPDEVLARLLDVAVQLAWGLAHAHRRGLVHQDVKPANVLLDEAGTAKVTDFGLSRVG 178
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6909.17895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN11_ECTSI0.000e+086.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7W9HD96_9ACTN1.220e-1736.78Non-specific serine/threonine protein kinase n=1 T... [more]
A0A354WCX3_9CYAN2.280e-1734.21Non-specific serine/threonine protein kinase (Frag... [more]
H2JUZ2_STRHJ1.370e-1634.16Non-specific serine/threonine protein kinase n=11 ... [more]
A0A6J7ZKI8_PLARU1.910e-1633.68Non-specific serine/threonine protein kinase n=1 T... [more]
D5ZVG1_STRV18.370e-1635.67Non-specific serine/threonine protein kinase (Frag... [more]
UPI001892452B4.420e-1537.89serine/threonine-protein kinase n=4 Tax=Catenulisp... [more]
A0A6G5RRK3_9ACTN8.010e-1535.67Non-specific serine/threonine protein kinase n=1 T... [more]
UPI0003494A8A1.320e-1436.46protein kinase n=1 Tax=Nocardiopsis chromatogenes ... [more]
A0A810NWL5_9ACTN1.340e-1436.02Non-specific serine/threonine protein kinase n=2 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6909contigEcto-sp13_S_contig6909:3..7891 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score1998.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LN11
Model size3882
KEGG koko:K04409,ko:K13412,ko:K19833
KEGG Pathwayko04010,ko04011,ko04012,ko04014,ko04024,ko04062,ko04360,ko04392,ko04510,ko04626,ko04650,ko04660,ko04666,ko04810,ko05120,ko05145,ko05205,ko05211,map04010,map04011,map04012,map04014,map04024,map04062,map04360,map04392,map04510,map04626,map04650,map04660,map04666,map04810,map05120,map05145,map05205,map05211
Hectar predicted targeting categoryother localisation
GOsGO:0000188,GO:0001932,GO:0001933,GO:0002831,GO:0003674,GO:0003824,GO:0004721,GO:0006464,GO:0006469,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019220,GO:0019222,GO:0019538,GO:0023051,GO:0023057,GO:0030587,GO:0031152,GO:0031323,GO:0031324,GO:0031347,GO:0031399,GO:0031400,GO:0031667,GO:0031668,GO:0031669,GO:0032101,GO:0032268,GO:0032269,GO:0032502,GO:0033549,GO:0033554,GO:0033673,GO:0036211,GO:0042325,GO:0042326,GO:0042578,GO:0042594,GO:0043086,GO:0043170,GO:0043405,GO:0043407,GO:0043408,GO:0043409,GO:0043412,GO:0043549,GO:0043900,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044764,GO:0045859,GO:0045936,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051703,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0070372,GO:0070373,GO:0071496,GO:0071704,GO:0071900,GO:0071901,GO:0080090,GO:0080134,GO:0090702,GO:0098630,GO:0098743,GO:0099120,GO:0140096,GO:1900424,GO:1901564,GO:1902531,GO:1902532
Exons12
EggNOG free text desc.Rac GTPase binding
EggNOG OGsKOG0578@1,KOG0578@2759
EC2.7.11.1
Cds size3879
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03036,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6909.17895.1prot_Ecto-sp13_S_contig6909.17895.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6909 6..7891 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463949.2521942-UTR-Ecto-sp13_S_contig6909:2..51681463949.2521942-UTR-Ecto-sp13_S_contig6909:2..5Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6909 3..5 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463949.2714903-CDS-Ecto-sp13_S_contig6909:5..1521681463949.2714903-CDS-Ecto-sp13_S_contig6909:5..152Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 6..152 +
1681463949.280354-CDS-Ecto-sp13_S_contig6909:690..15511681463949.280354-CDS-Ecto-sp13_S_contig6909:690..1551Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 691..1551 +
1681463949.2902315-CDS-Ecto-sp13_S_contig6909:1798..21401681463949.2902315-CDS-Ecto-sp13_S_contig6909:1798..2140Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 1799..2140 +
1681463949.2988915-CDS-Ecto-sp13_S_contig6909:2464..26381681463949.2988915-CDS-Ecto-sp13_S_contig6909:2464..2638Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 2465..2638 +
1681463949.3074496-CDS-Ecto-sp13_S_contig6909:3104..31851681463949.3074496-CDS-Ecto-sp13_S_contig6909:3104..3185Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 3105..3185 +
1681463949.3160381-CDS-Ecto-sp13_S_contig6909:3408..41911681463949.3160381-CDS-Ecto-sp13_S_contig6909:3408..4191Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 3409..4191 +
1681463949.324674-CDS-Ecto-sp13_S_contig6909:4576..49301681463949.324674-CDS-Ecto-sp13_S_contig6909:4576..4930Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 4577..4930 +
1681463949.333599-CDS-Ecto-sp13_S_contig6909:5319..54691681463949.333599-CDS-Ecto-sp13_S_contig6909:5319..5469Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 5320..5469 +
1681463949.3445437-CDS-Ecto-sp13_S_contig6909:6161..63471681463949.3445437-CDS-Ecto-sp13_S_contig6909:6161..6347Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 6162..6347 +
1681463949.3547578-CDS-Ecto-sp13_S_contig6909:6572..68511681463949.3547578-CDS-Ecto-sp13_S_contig6909:6572..6851Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 6573..6851 +
1681463949.3653631-CDS-Ecto-sp13_S_contig6909:7137..74371681463949.3653631-CDS-Ecto-sp13_S_contig6909:7137..7437Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 7138..7437 +
1681463949.376228-CDS-Ecto-sp13_S_contig6909:7669..78911681463949.376228-CDS-Ecto-sp13_S_contig6909:7669..7891Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6909 7670..7891 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6909.17895.1

>prot_Ecto-sp13_S_contig6909.17895.1 ID=prot_Ecto-sp13_S_contig6909.17895.1|Name=mRNA_Ecto-sp13_S_contig6909.17895.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1293bp
MFDMLDSERQGRVLESDLFKHLLPLLEKTGLCSPLRKESTGRRKSSVKGS
VPRRPRPSAARPSGPKIPPRPAGTPPATAKRRITSPTTGGVRRETFSAAP
TTANQTSSSPSNGSSQGPKRDSAASADGLNRTLSPGYLRERPSKFWVTPE
HGGGGDPPASGQFAPLVDRVDPVESRTASGPLPPLEDRVAPIELGLKRNN
ETENVSGAKGNSHHQTESEQGKEATVTTGRAENGTNRQAEEQAGGISGAA
TEEAKELAPSGDLDAEPAVDPLAGKDVLEWTAADVRTWIRALPRGLATFA
EAEAFAKGRVDGKKLATLKLSDIKRKEFRHAKFKAKIPTALWVEIKRIQQ
TVPTPVTAMTVAAAAATTAAVLPSRFSPGQTIVDEAVNTPLCTVKQSVGQ
GAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILA
AVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGRSLEELVAEGEGE
LYDGTPAEIQGRLLSYSIQLARGLGHIHRCGVLHQDIKPANIMVSNDAGL
LITDFGFATVGQFGPPPQLPAEKPTSVPALDATAAGVEPVGEGLEKGCGC
DKASPSGNPQGGVDTGSGNEPQGPSGWIPGYSDSGGPHTSASENRCCGSM
ERDMIAAEGRQQARTAAGGSAEQAQVPHSCPVVGTGAGPPLITKVSPATA
PAEPAGRRSPLAGNGGGPCSAGKEVMDGTGGASGLLQQNGDNGRPPNRYS
VLFSTLRGYTPRYQSPEVSAIIKKKDDAAAAVMQEGGRSMKIGAQQHPSA
SRSEKNHDMVDAWSSQFSHRSDMWAAGVVVLEMYAGGLGNLPAGQGDNAL
ELLETLVRNTVGHDGGHKNCASADGEDKTKKGRDTFLVDMPEGVLAVLRE
VFQRTAGNRPFSMEALAARLSETLGGMLEKKLAVVPCPSAGAPSSSSLCE
QAPVYVECDENHAKVGRLHMWLGKALFLKGDDRREQAMQEYREGVRVLLE
SEAERRSPSMALFRWYLGKALLENGEIDEALPHLAESVSIDPENAKYRHT
LGLAKRVTGDEAGAREDLLEAALLDEEDAEDRYQLRMQRIDEKRRKNAEE
EQQRVSRSLQESEGAGTPQGAASPKPGDAEESGTPLAVTTPSDEPTAAMS
GFAQSRLLALERASSSTRTYALENLSDYRNHKLAGKLIGDTWGSGGGVTH
PIDYSFGDKNTRDVATLAEVRRFSVGDEISGGPDMSASGKPLQPLHCCGF
SSPYDDTRVDTGIDGKFVICGLLSPGQASLHIPGEAYTATRST
back to top

mRNA from alignment at Ecto-sp13_S_contig6909:3..7891+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6909.17895.1 ID=mRNA_Ecto-sp13_S_contig6909.17895.1|Name=mRNA_Ecto-sp13_S_contig6909.17895.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7889bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6909:3..7891+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCAATGTTCGATATGCTAGACTCTGAACGCCAGGGCAGGGTTTTAGAAAG
CGATCTCTTTAAACACTTGCTTCCCCTCCTGGAGAAGACGGGCCTTTGTA
GCCCACTGAGGAAAGAGTCAACGGGGCGGAGGAAGTCGTCAGTGAAAGGG
GTGAGGAGTTGTGACGCTCCGATCATTGGCTATCCGATATTGAGAAGTGT
ATTGGGATATGTTGTTTTCTTCGCGAACATTGAATTTTCTCTTTGATTGC
GGTGCCATCGTTAATGTTTTAGAAGAACTGGAGCGAAACCCTGCCTGTAT
TCCACAATGCTTGATGTGTTCGAAAGCGGACGCCATGGCTGTGTTGCCGG
TCTTACCCGGTACGAAACGTAGATGAAGCCGGGTCACGCGATCTCAAAGG
ACTGTGCACAGCAAGCTCGTTTTTCATTTCTGTTGTAGCGATCTTGGCAC
AATTTTCCTCTCTTTTTGGACACATTTTTGGCGTGGTTGTAGCAGTCGAC
TCAAGACACTCAATTTGAAACAAACAGAACCGCCCGCCGCGGTAAGAACG
GCGAGATATTGTTGAAGATATTGTTGTAGACATGCATACGTTATCCATGG
TTCAACTACCAGGGCGAGCAACAAATACGAACAACCCCACAATATTCCCC
ACGTCCTCGCCTACGCCCAACCACTTGCTCTTGTCCAGTCGGTGCCCAGA
CGCCCACGTCCTAGTGCCGCTCGTCCATCAGGGCCCAAAATACCACCGCG
ACCAGCGGGAACCCCTCCCGCAACCGCGAAAAGACGGATCACTTCTCCCA
CCACCGGAGGAGTGCGAAGGGAAACATTCTCCGCCGCTCCTACTACCGCG
AATCAGACTTCATCCTCGCCCTCGAATGGCTCCTCACAGGGGCCAAAAAG
GGATTCTGCCGCAAGTGCCGATGGCTTGAATCGAACGTTATCTCCAGGAT
ACCTTCGAGAACGGCCTTCGAAATTCTGGGTCACTCCGGAGCACGGCGGG
GGCGGCGATCCTCCTGCTTCTGGTCAATTCGCTCCCCTCGTAGACCGGGT
AGATCCGGTAGAGAGCCGGACTGCTTCTGGTCCGCTCCCTCCTCTCGAAG
ACCGAGTGGCACCGATAGAGCTCGGCTTGAAACGCAACAATGAAACGGAG
AACGTGAGCGGCGCAAAGGGAAACAGCCACCACCAGACCGAAAGTGAGCA
AGGGAAAGAAGCAACAGTCACCACCGGTAGGGCGGAAAATGGCACGAACC
GGCAGGCAGAGGAGCAAGCCGGAGGAATATCAGGAGCGGCGACCGAGGAG
GCGAAAGAACTTGCCCCCTCTGGAGATTTAGATGCTGAACCAGCGGTAGA
TCCGTTGGCCGGCAAAGACGTTCTAGAGTGGACGGCGGCTGACGTGCGGA
CGTGGATCCGGGCGCTGCCCCGAGGTTTGGCGACTTTCGCGGAGGCGGAA
GCCTTTGCGAAGGGTCGAGTGGATGGGAAGAAGCTTGCGACCCTGAAGCT
TTCGGACATCAAGCGGAAAGAGTTTCGTCACGCCAAGTTCAAGGCTAAGG
TAGGTGCTGATTGGTCCGTCCCGCTTGCTGATCTCCCCCCGTACGCTGCG
TAGTGCCCGGTGGGATCACGAAGTCGTCCCACAAGCGCTGCGCGTGGGGC
ACAAACAAAAGTGTAACCAGAAATGTTAAGCCGACATAGTTTCTCCGATG
CCGACATCGGGGTTGATCCGACAGCAGTTCTCCGTTTACCATCGGCCCCG
TTTGCTCGGTCCTTACGTTGTTCCGGGTCTCTACGTCCATTCTCAGATAC
CCACGGCACTGTGGGTCGAGATCAAACGGATTCAGCAGACCGTACCTACC
CCCGTCACGGCGATGACGGTGGCGGCGGCAGCGGCCACCACCGCAGCGGT
GCTGCCTTCACGTTTTTCACCAGGGCAAACAATCGTGGACGAGGCCGTCA
ACACACCCCTATGCACCGTGAAGCAGTCCGTCGGCCAGGGGGCCTTTGGG
GAGGTTTATCAGGTCGTTTGGACGGGGATCGGATCAGACAGGGGTTCGAC
CCTGGCGATGAAGACTGTGCGCCTGGCGGATATAAGCTCGGATGAGCGAG
ATGAGTACCGAGTTCTTCTCGTGGAGGAGATCCTGGCGGTGAGGACAATG
AACCCCGTCGCCTTTTTTCCATACCTTTACGGGGGGGGAACAACTAGGTT
TTCTAGTGGGCGAAAAATTTCCCTTGCAGAGCATTGCTCTCGGCGTAATA
CATTTCGAGTGAAAGTAGTTTGTTCACGACCGTGAGGACGGAGTCGGGCT
ATATTGACGGCGCCTCAGTCACATGAGACGCACAATCCCGTGGTTGACAG
AAGGTTTTTGTGCGGCTGCTCGGCTTTCGATTGTATTCGTCTCGACCCTG
TGCACCCTGCTACTCGTGGCCTCACGTGTGTCGTCTGCTGGCGTTTACCA
CACGGCTTGCAGGCGGTGCGCGTGAAACCCCACCCAAACGTCGTCAACGT
ACGGTTTGCGCACATCATGGGGTTCTGCAGTGAAAACGAGGAATACTTCT
GTTTTGAGGACTTCGTGACCGGTAGGAGCCTTGAGGAACTTGTCGCAGAG
GGCGAGGGAGAGCTGTATGATGGCACCCCGGCCGAGGTGACCCAACGTCG
CATTTTTGACACCATTAACACTCTCAATAACGTCGTGTCACTCCTCCCTT
TTGAAATAGTTCAGCAATAGTCGCCAACGGTAATCCTGATTGAGCGGAAT
TTCGTATCCGTGCTGTTCTACAACGGGGAGAGCCCGAAATCAACCACTGT
AAATTGTAAATTGCATTGAAGTATGAACGACATCATCCCCGCACGCTTTC
CACGGAGGTATTTTCTGGTTTTCGAATCCTTCAAACTGTGTCGAAACAAT
TCTAAATATGAGAGTTGACGAGGCAAGAGCGAAGCGGTTACGAGTGAGGC
AGTCTGCGCAGCACTTCATCGCGTTGAGATATGCCTAAACTTCTTGGTAT
CATTTCACTATCTGGTAGAGCCCCTGAATTTCGATTGTTCGGTTCCTCCC
GCGTGCGACATTTTGACTTTTCGGGGTGCATGGATGACTTGTTTTTATGC
AGATCCAGGGGCGCCTACTGAGCTATTCCATCCAGCTCGCGCGCGGGCTC
GGCCATATTCATCGCTGCGGCGTTCTGCACCAGGTGACGACTTCTCGCTT
CTTCCGCACTATTAGTCACCACTCGGGCGAAGGGAACACATCAGACTGAT
CGCACCACTCTCCTGAGGCCATCATCACCCGAGGCAAGAAACGATCGCCA
CACCCTTGAGAAGTCGTTTTCCTTCATCGTGTAATTTTTTTTCAAGAGAG
CCGAAAGCACGCAGCCCTGCCCGATTTCCTTACACCCACATCCATTTATC
GTCTAGGATATTAAACCAGCGAACATTATGGTGAGCAACGACGCGGGACT
ACTCATCACAGACTTCGGCTTCGCCACCGTGGGGCAGTTCGGTCCACCAC
CGCAGCTGCCGGCTGAAAAGCCGACCTCGGTTCCAGCCCTCGACGCCACC
GCTGCTGGGGTAGAACCAGTGGGAGAAGGTTTAGAAAAGGGATGTGGTTG
CGACAAAGCTTCCCCTTCAGGAAACCCTCAAGGTGGTGTCGACACGGGAA
GTGGCAATGAGCCTCAGGGACCATCCGGGTGGATCCCCGGCTACAGCGAT
TCCGGAGGACCCCATACCTCAGCCAGCGAAAACAGGTGCTGCGGCAGCAT
GGAACGGGACATGATTGCAGCTGAGGGCAGACAGCAGGCTAGGACGGCCG
CGGGTGGTTCTGCCGAGCAAGCCCAGGTACCGCATTCCTGCCCCGTAGTA
GGGACAGGGGCGGGGCCACCCCTGATTACAAAAGTGAGCCCAGCAACAGC
TCCAGCCGAGCCAGCCGGTAGGCGATCCCCGCTCGCGGGGAACGGTGGCG
GCCCCTGCAGTGCTGGGAAAGAAGTCATGGACGGAACCGGGGGGGCGTCA
GGGCTTTTGCAACAAAATGGCGACAACGGAAGGCCGCCGAATCGATACAG
CGTCCTCTTTAGTACCCTCAGAGGGTACACACCAAGATACCAGTCCCCAG
AAGTTTCCGCAATCATTAAAAAGAAAGATGATGCGGCGGCGGCGGTGATG
CAAGAAGGTGGTCGATCGATGAAAATCGGAGCCCAACAGGTCGGTGTATG
GCTTTGTGAAGTGCAAGGCACGATCACGTCGACACAACAGGATCGCGGTG
GTAGCAATCCTTGGAATCCGGCGTTTCTCAAGTTCAATAGGAAGGCCTCT
CGTGTGCCCGTTGGGTACCCACGGTGCCTCTCCCATTCCTAGCCGAGTCG
ACACACGATGGGGACACGCTCAGCCTGGACTTCCCTCGAACTTGGTCCTA
TGCAATCAAGACAGCATTCATCGAACAGCAAAGTTCCCTTGGTGTTCTAG
TAAAATCTGCCGAACAGGCAGTCCAACAGACCAACCACCCCGCACTGAAC
GAACCCTGTTGATTACACCCTCCTCTCTTATCAATCTTCGTCCGTCTTAC
CTCCCTTCTTTACCCTACCTTAAGCACCCATCCGCATCACGGTCGGAGAA
GAATCACGACATGGTCGATGCGTGGAGTTCCCAATTTTCCCATCGGAGCG
ATATGTGGGCGGCAGGGGTCGTAGTGCTCGAGATGTACGCGGGCGGTCTG
GGGAACCTGCCGGCAGGTCAGGGCGACAATGCCCTCGAATTACTTGAAAC
CCTGGTTCGCAATACCGTCGGGCATGACGGGGGGCATAAAAACTGCGCAA
GCGCAGACGGAGAAGACAAGACCAAGAAAGGGCGAGACACGTTTCTGGTG
GATATGCCGGAGGGAGTGCTTGCGGTTTTGCGGGAAGTTTTCCAGCGAAC
GGCTGGAAATCGACCGTTTTCGATGGAGGTGAGGTGTTCGTTGGGGTTGC
GGCTTTGACTTACGGCCGACAGTTCAAGCATCCACCAATAGTACGCCAGG
TTTGGGTGTGAGAAAAATGACCAGGAGCAATTTCGTGGCGAACGTGCGCT
GGATGTAGACATTTTGCTGTAACTGAGAGCGCTACTTTTCGCCCTAGTGT
TCTGAAAGCCTCTCTGGCCAAATGCAACATGTCTACCGCACCACAAGCGC
GTTGACAACGGAGAGTCTCCCCGGTTGGTGGCCTACGTGCTCTGTGTCTT
CGTATTGGTCTACGTTGAGGTTGACAAAGACATTATCAAGATTCTCCGAC
ACGTCCCCGACGCGCTTGCCCTATTGCTATGCCGTTTCACGTTTTTCTCT
CTGCCCTTACCGCCCAGGCGTTGGCGGCGCGCCTTTCCGAAACCCTTGGC
GGCATGCTGGAGAAAAAGCTCGCCGTTGTTCCGTGCCCTTCGGCCGGGGC
CCCCTCCTCTTCCTCGCTGTGCGAACAGGCGCCGGTCTACGTCGAGTGTG
ATGAGAATCACGCCAAGGTGAGGCTAAGAGGGTGATTCAGAGTCAACCCG
CATCCCACGAGCTCCAAACACGTCCCATGTATTGAGCGTCATCAACACTG
CCTCCGAACGTGGTCAAGTACAGTATGCTGTCCTTGGGCGGCATAGGCAA
GGGGTTGGGTTGTTGCTGCCTTGGTGTGTTGTTGGGCCAATGTCACGAAA
TGGAGGGAGGCCTGTCTCTCTTTTGCTTTGTTGCGCGCGGCTGGAGGCGT
TGCGCGGTGTTGGCTCGGTGCACGTTCGCCAGGGTAGAGGTATGCTTTCT
GGAGAACTGACGCAAGAAGGGACGCCAGTTCCATGCGTCCTTCAGCGTAA
CGTTAGGCGAAGTTCACCGATTTCATGCCCATCCAGGGTCAGACGATGGG
ACAGAAAGAAACCACGAAGACCAACCACCATTCGCGGCAAGGGCGTTTCC
TAAGACCACATGCACAACAAATGGAAAGAGGCACGCAACGTTAAGAGAGC
ACCACGATTCCTCAACAACATCACAAAGAAAAGCAATGCGTGCTGCTCTC
ACCTGAGAACGCATGACAACAACCGCGCAAATGCGAGCACGTGCGTTGCT
GCTTGTGTCGCGAGGTACGAGAACACCATATTTCATGTCTGCCTGCCGTG
GCGAAGTAGCCCATGACAACACGTCTCCTTTTGCTCCACAACGAACCTCG
CGTGGGAAGGTGGGGCGCCTGCACATGTGGCTTGGGAAAGCCCTTTTCTT
GAAGGGCGACGACCGGCGCGAGCAAGCCATGCAGGAGTACCGGGAGGGCG
TTAGGGTACTGCTGGAGAGCGAAGCCGAACGACGGTCACCGAGCATGGCT
CTCTTCCGTTGGTACCTGGGTAAAGCTCTGCTGGAGAATGGCGAGGTAAA
AACTGTACACCAGATGTTCTACTGGAAGAACGGGTGGGTGAAAGCACACC
ACCAAATCATCGCATGGCTCAAGGTATTCAAAAAACATGGTCGATATAAA
GGGCGACACAGCTAGTCCTCTGAAATCTGACAAGTTTTTCGCTTGCGCAT
CTGTCGATCCTTCCGTCGGACCGATATCGCTTCGCCCGCTCGCTCGCCGC
ACTACCCCTGGCCTTTGTAGATCGACGAGGCCCTGCCCCACCTCGCAGAG
TCGGTTTCGATAGACCCAGAAAATGCCAAGTACCGCCACACCCTCGGCCT
GGCCAAGCGCGTCACGGGCGACGAGGCCGGAGCACGGGAGGATCTCCTCG
AGGCAGCGCTGCTGGACGAGGAGGACGCGGAAGATCGGTACCAGCTCCGC
ATGCAACGCATCGACGAGAAGCGGAGAAAGAATGCAGAGGAGGAACAGCA
GCGCGTTTCACGGTCATTACAAGAGTCTGAGGGGGCTGGCACGCCGCAGG
TTTGACATGTCTCCGTAGTTCTAGCGCTCATAGGGTGCGGTGTGCGCCCA
AAATGTTGGACTGATTAGCTTGAGACTGGCGAGGAACCGTTCTTGCATTA
GGTTTGTAAATCATGTCGACCCACGGGAAAGAAGACATTTCCGATGAGTT
CATGTTTCGCTGAAGGTATTTTATCGATCACTCCGATAAGGAGCCGTCTT
ATTTCGCGCTCTACGTTGTTTCCTTCGAAAGCAGTCCCCGTCTGTTCATG
TCGCTGAGCTCCACCACCTGTTTTTGTTCCCCCAGGGAGCGGCGTCCCCC
AAGCCGGGCGATGCAGAGGAAAGCGGTACGCCCCTGGCGGTGACGACACC
AAGTGATGAGCCTACGGCCGCAATGTCCGGCTTCGCTCAATCGCGCCTCC
TGGCGCTTGAGAGGGCCTCTTCCTCGACTCGAACCTATGCCCTCGAGAAC
CTCAGCGACTACCGGAACCATAAATTGGCGGGCAAACTCATCGGAGACAC
TTGGGGAAGCGGCGGGGGGGTGACTCACCCCATCGATTACTCTTTTGGGG
ATAAAAACACCCGAGATGTGGCGACTCTTGCCGAGGTGGGCGGCCCGGCT
GCGATCGGGAATCGTGCCCCAAGCTGATGTCCCGAGATTGGCGACAAACA
AGATAGTGCTTGTCTTTGCGTGTATTGCTGTACTGACGCGCTTGAGGCTA
ACACCACCTCTACGCAACTCCTCGCCGTAGGTCGGTAGAACGGACGGTGG
CGCACGGACTGCGGGGTTCCTCATCTCTTGACGTTCCCGATGTCTCCAAC
ATCCCCCGTTGTTGCAGGTCCGGCGGTTCTCTGTCGGAGACGAAATTTCC
GGGGGGCCAGACATGTCCGCTTCTGGAAAACCGCTACAACCACTACACTG
TTGCGGCTTTTCTTCTCCGTACGATGACACGCGTGTTGACACGGGTATCG
ACGGAAAGTTTGTTATCTGCGGTCTCTTGTCCCCAGGACAGGCTAGCCTG
CATATTCCGGGAGAAGCGTACACGGCGACGAGGTCGACG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6909:3..7891+

>mRNA_Ecto-sp13_S_contig6909.17895.1 ID=mRNA_Ecto-sp13_S_contig6909.17895.1|Name=mRNA_Ecto-sp13_S_contig6909.17895.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6909:3..7891+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTCGATATGCTAGACTCTGAACGCCAGGGCAGGGTTTTAGAAAGCGA
TCTCTTTAAACACTTGCTTCCCCTCCTGGAGAAGACGGGCCTTTGTAGCC
CACTGAGGAAAGAGTCAACGGGGCGGAGGAAGTCGTCAGTGAAAGGGTCG
GTGCCCAGACGCCCACGTCCTAGTGCCGCTCGTCCATCAGGGCCCAAAAT
ACCACCGCGACCAGCGGGAACCCCTCCCGCAACCGCGAAAAGACGGATCA
CTTCTCCCACCACCGGAGGAGTGCGAAGGGAAACATTCTCCGCCGCTCCT
ACTACCGCGAATCAGACTTCATCCTCGCCCTCGAATGGCTCCTCACAGGG
GCCAAAAAGGGATTCTGCCGCAAGTGCCGATGGCTTGAATCGAACGTTAT
CTCCAGGATACCTTCGAGAACGGCCTTCGAAATTCTGGGTCACTCCGGAG
CACGGCGGGGGCGGCGATCCTCCTGCTTCTGGTCAATTCGCTCCCCTCGT
AGACCGGGTAGATCCGGTAGAGAGCCGGACTGCTTCTGGTCCGCTCCCTC
CTCTCGAAGACCGAGTGGCACCGATAGAGCTCGGCTTGAAACGCAACAAT
GAAACGGAGAACGTGAGCGGCGCAAAGGGAAACAGCCACCACCAGACCGA
AAGTGAGCAAGGGAAAGAAGCAACAGTCACCACCGGTAGGGCGGAAAATG
GCACGAACCGGCAGGCAGAGGAGCAAGCCGGAGGAATATCAGGAGCGGCG
ACCGAGGAGGCGAAAGAACTTGCCCCCTCTGGAGATTTAGATGCTGAACC
AGCGGTAGATCCGTTGGCCGGCAAAGACGTTCTAGAGTGGACGGCGGCTG
ACGTGCGGACGTGGATCCGGGCGCTGCCCCGAGGTTTGGCGACTTTCGCG
GAGGCGGAAGCCTTTGCGAAGGGTCGAGTGGATGGGAAGAAGCTTGCGAC
CCTGAAGCTTTCGGACATCAAGCGGAAAGAGTTTCGTCACGCCAAGTTCA
AGGCTAAGATACCCACGGCACTGTGGGTCGAGATCAAACGGATTCAGCAG
ACCGTACCTACCCCCGTCACGGCGATGACGGTGGCGGCGGCAGCGGCCAC
CACCGCAGCGGTGCTGCCTTCACGTTTTTCACCAGGGCAAACAATCGTGG
ACGAGGCCGTCAACACACCCCTATGCACCGTGAAGCAGTCCGTCGGCCAG
GGGGCCTTTGGGGAGGTTTATCAGGTCGTTTGGACGGGGATCGGATCAGA
CAGGGGTTCGACCCTGGCGATGAAGACTGTGCGCCTGGCGGATATAAGCT
CGGATGAGCGAGATGAGTACCGAGTTCTTCTCGTGGAGGAGATCCTGGCG
GCGGTGCGCGTGAAACCCCACCCAAACGTCGTCAACGTACGGTTTGCGCA
CATCATGGGGTTCTGCAGTGAAAACGAGGAATACTTCTGTTTTGAGGACT
TCGTGACCGGTAGGAGCCTTGAGGAACTTGTCGCAGAGGGCGAGGGAGAG
CTGTATGATGGCACCCCGGCCGAGATCCAGGGGCGCCTACTGAGCTATTC
CATCCAGCTCGCGCGCGGGCTCGGCCATATTCATCGCTGCGGCGTTCTGC
ACCAGGATATTAAACCAGCGAACATTATGGTGAGCAACGACGCGGGACTA
CTCATCACAGACTTCGGCTTCGCCACCGTGGGGCAGTTCGGTCCACCACC
GCAGCTGCCGGCTGAAAAGCCGACCTCGGTTCCAGCCCTCGACGCCACCG
CTGCTGGGGTAGAACCAGTGGGAGAAGGTTTAGAAAAGGGATGTGGTTGC
GACAAAGCTTCCCCTTCAGGAAACCCTCAAGGTGGTGTCGACACGGGAAG
TGGCAATGAGCCTCAGGGACCATCCGGGTGGATCCCCGGCTACAGCGATT
CCGGAGGACCCCATACCTCAGCCAGCGAAAACAGGTGCTGCGGCAGCATG
GAACGGGACATGATTGCAGCTGAGGGCAGACAGCAGGCTAGGACGGCCGC
GGGTGGTTCTGCCGAGCAAGCCCAGGTACCGCATTCCTGCCCCGTAGTAG
GGACAGGGGCGGGGCCACCCCTGATTACAAAAGTGAGCCCAGCAACAGCT
CCAGCCGAGCCAGCCGGTAGGCGATCCCCGCTCGCGGGGAACGGTGGCGG
CCCCTGCAGTGCTGGGAAAGAAGTCATGGACGGAACCGGGGGGGCGTCAG
GGCTTTTGCAACAAAATGGCGACAACGGAAGGCCGCCGAATCGATACAGC
GTCCTCTTTAGTACCCTCAGAGGGTACACACCAAGATACCAGTCCCCAGA
AGTTTCCGCAATCATTAAAAAGAAAGATGATGCGGCGGCGGCGGTGATGC
AAGAAGGTGGTCGATCGATGAAAATCGGAGCCCAACAGCACCCATCCGCA
TCACGGTCGGAGAAGAATCACGACATGGTCGATGCGTGGAGTTCCCAATT
TTCCCATCGGAGCGATATGTGGGCGGCAGGGGTCGTAGTGCTCGAGATGT
ACGCGGGCGGTCTGGGGAACCTGCCGGCAGGTCAGGGCGACAATGCCCTC
GAATTACTTGAAACCCTGGTTCGCAATACCGTCGGGCATGACGGGGGGCA
TAAAAACTGCGCAAGCGCAGACGGAGAAGACAAGACCAAGAAAGGGCGAG
ACACGTTTCTGGTGGATATGCCGGAGGGAGTGCTTGCGGTTTTGCGGGAA
GTTTTCCAGCGAACGGCTGGAAATCGACCGTTTTCGATGGAGGCGTTGGC
GGCGCGCCTTTCCGAAACCCTTGGCGGCATGCTGGAGAAAAAGCTCGCCG
TTGTTCCGTGCCCTTCGGCCGGGGCCCCCTCCTCTTCCTCGCTGTGCGAA
CAGGCGCCGGTCTACGTCGAGTGTGATGAGAATCACGCCAAGGTGGGGCG
CCTGCACATGTGGCTTGGGAAAGCCCTTTTCTTGAAGGGCGACGACCGGC
GCGAGCAAGCCATGCAGGAGTACCGGGAGGGCGTTAGGGTACTGCTGGAG
AGCGAAGCCGAACGACGGTCACCGAGCATGGCTCTCTTCCGTTGGTACCT
GGGTAAAGCTCTGCTGGAGAATGGCGAGATCGACGAGGCCCTGCCCCACC
TCGCAGAGTCGGTTTCGATAGACCCAGAAAATGCCAAGTACCGCCACACC
CTCGGCCTGGCCAAGCGCGTCACGGGCGACGAGGCCGGAGCACGGGAGGA
TCTCCTCGAGGCAGCGCTGCTGGACGAGGAGGACGCGGAAGATCGGTACC
AGCTCCGCATGCAACGCATCGACGAGAAGCGGAGAAAGAATGCAGAGGAG
GAACAGCAGCGCGTTTCACGGTCATTACAAGAGTCTGAGGGGGCTGGCAC
GCCGCAGGGAGCGGCGTCCCCCAAGCCGGGCGATGCAGAGGAAAGCGGTA
CGCCCCTGGCGGTGACGACACCAAGTGATGAGCCTACGGCCGCAATGTCC
GGCTTCGCTCAATCGCGCCTCCTGGCGCTTGAGAGGGCCTCTTCCTCGAC
TCGAACCTATGCCCTCGAGAACCTCAGCGACTACCGGAACCATAAATTGG
CGGGCAAACTCATCGGAGACACTTGGGGAAGCGGCGGGGGGGTGACTCAC
CCCATCGATTACTCTTTTGGGGATAAAAACACCCGAGATGTGGCGACTCT
TGCCGAGGTCCGGCGGTTCTCTGTCGGAGACGAAATTTCCGGGGGGCCAG
ACATGTCCGCTTCTGGAAAACCGCTACAACCACTACACTGTTGCGGCTTT
TCTTCTCCGTACGATGACACGCGTGTTGACACGGGTATCGACGGAAAGTT
TGTTATCTGCGGTCTCTTGTCCCCAGGACAGGCTAGCCTGCATATTCCGG
GAGAAGCGTACACGGCGACGAGGTCGACG
back to top