prot_Ecto-sp13_S_contig6901.17886.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6901.17886.1
Unique Nameprot_Ecto-sp13_S_contig6901.17886.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length797
Homology
BLAST of mRNA_Ecto-sp13_S_contig6901.17886.1 vs. uniprot
Match: D8LSX8_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX8_ECTSI)

HSP 1 Score: 1152 bits (2979), Expect = 0.000e+0
Identity = 650/798 (81.45%), Postives = 685/798 (85.84%), Query Frame = 0
Query:    1 VVLRQRAFFLSKVREAVQRMALVERRLTEQDNDLTEYRVTRSKAEGAVAALQGRQTEARLSSLEDDISGLKASLGGRTPTQELSEEIAATMKTALTAEMQRSEARLDQIRGVELTTASLERHRTDGEGGETARIRRELQDSEGSLQRRIEEVRASDLRRXXEISGEVVREREHRLKDRAEVEQEVFNVRASLQRTEQYWHERIHDRLNRLERSVESTVSDHSHTRSSVASIGSQLRQLQLEIQNARDTSRRAGQWASDRREEAPSPAIGAHHMPILAQSMQSAARPPQTTASTLA-DSPKTALEESGKVIPKEQDGARGSPNIIAGEEGVESTTGAMIPAVQACDHQPTHLECSSAVGVCSMPGVVATADATAGQENIEKDDNSADVDNKSYPPRDGDSSPPGSDQRSVGSIVNNGKDSKTPFPFKTGEGTGTPQQNGNLPEPHTLDRLYDRGKVIHASSADTLRKSALAAVSFSAEEDAALAASAGEAYDGRPSQLIRGRSPCSSPSSVSSCGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAEALDLNISPPKLLGDGLGASDNEKLADTEAGGSDVSQSRMARSTKTGSSSDSSFSVDDDEAVVGQQRGLGLPETCDNNDSSSRPGVGKTCAPTSSRSTLTMSERGSCDDVSATVGASKYGGRVHHENPRKAPPPXXXXXXMPSEIRRKSMAAVSTGPAPVSFRDRSASKDSGVVTAQCEFCLRRYLKSAMSTHLQVCELRLVRCPFQCGVKVLVRNLEKHMGSCSTKESAEGEGLVNA 797
            VVLRQRAFFLSKVREAVQRMALVERRL+EQDNDLTEYRVTRSKAEGAVAALQ RQ E RLS+LEDD+SGLKASLGGRTPTQELSEEIA T+ TALTAEMQRS+AR DQIRGVELTT SLERH TDGEGGETARIRRELQDSEGSLQRRIEEVRASDLRR  EISGEV+RER +RLKDRAEVEQEV N+RASLQRTE  WH RIHDRL+RLE SV ST+SDHSHTRSSV SIGSQL+QLQLEIQNARDTSRR GQWASDR EEAPS AI  HHMPILAQS+QSAARPPQTTASTLA DSPKTALEESG+V+P+EQDGA GS N IA EEGVES TG MIPAVQACD QPTH+ CSSAVG+CSMPG VATADATAGQENI++DDNS DVDN S+  RD DS+PP S+QRSVGS+VN  KD + P+PFKTGEG GTP++NG L EP   DRL D  KVIH SSADTLRKSALAAVSFSAEEDA LAASA EA DGRPSQ IRGRSPC+SPSSVSSCGSS   XXXXXX                                 PAEALDLNISPPKLLGDGLGASD  KLADTEAGGSDVSQSRMARSTK+GSSSDSSFSVDDDEAVVGQQRGLGLPETCDN DSSSRPGVGKTCAPTSSRST T SERG+CDDVSAT G S YGGRVHH+NP+K PPP      MPSE RRKS+AAVSTGPAPVSFRDRSASKDSGVVTAQCEFCLRRYLKSAMSTHLQVCELRLVRCPFQCGVKVLVRNLEKHMGSCS KES E  G+V+A
Sbjct:    6 VVLRQRAFFLSKVREAVQRMALVERRLSEQDNDLTEYRVTRSKAEGAVAALQDRQVEVRLSNLEDDLSGLKASLGGRTPTQELSEEIATTITTALTAEMQRSQARSDQIRGVELTTVSLERHLTDGEGGETARIRRELQDSEGSLQRRIEEVRASDLRRMEEISGEVLRERGNRLKDRAEVEQEVSNIRASLQRTEHSWHGRIHDRLDRLEGSVASTLSDHSHTRSSVTSIGSQLKQLQLEIQNARDTSRRTGQWASDRHEEAPSLAIDGHHMPILAQSVQSAARPPQTTASTLAADSPKTALEESGEVLPEEQDGATGSTNTIATEEGVESATGVMIPAVQACDDQPTHVGCSSAVGLCSMPGRVATADATAGQENIDQDDNSGDVDNNSFSLRDADSAPPESNQRSVGSVVNTDKDIEAPYPFKTGEGIGTPEKNGKLTEPPPADRLRDHRKVIHTSSADTLRKSALAAVSFSAEEDAVLAASAEEAGDGRPSQSIRGRSPCASPSSVSSCGSSAPSXXXXXXSPLPLLHTPSVDSTDAPQAGDPGGAEKPFAATTPAEALDLNISPPKLLGDGLGASDKGKLADTEAGGSDVSQSRMARSTKSGSSSDSSFSVDDDEAVVGQQRGLGLPETCDNIDSSSRPGVGKTCAPTSSRSTPTTSERGTCDDVSATAGVSTYGGRVHHKNPQKGPPPRAPRPEMPSETRRKSVAAVSTGPAPVSFRDRSASKDSGVVTAQCEFCLRRYLKSAMSTHLQVCELRLVRCPFQCGVKVLVRNLEKHMGSCSMKESVESGGVVDA 803          
BLAST of mRNA_Ecto-sp13_S_contig6901.17886.1 vs. uniprot
Match: A0A6H5L2E5_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E5_9PHAE)

HSP 1 Score: 941 bits (2431), Expect = 0.000e+0
Identity = 619/1029 (60.16%), Postives = 662/1029 (64.33%), Query Frame = 0
Query:    1 VVLRQRAFFLSKVREAVQRMALVERRLTEQDNDLTEYRVTRSKAEGAVAALQGRQTEARLSSLEDDISGLKASLGGRTPTQELSEEIAATMKTALTAEMQRSEARLDQ------------------------------------------------------------------------------------------------------------------------------IRGVELTTASLERHRTDGEGGETARIRRELQDSEGSLQRRIEEVRASDLRRXXEISGEVVREREHRLKDRAEV-----------------------------------------------------EQEVFNVRASLQRTEQYWHERIHDRLNRLERSVESTVSDHSHTRSSVASIGSQLRQLQLEIQNARDTSRRAGQWASDRREEAPSPAIGAHHMPILAQSMQSAARPPQTTASTLA-DSPKTALEESGKVIPKEQDGARGSPNIIAGEEGVESTTGAMIPAVQACDHQPTHLECSSAVGVCSMPGVVATADATAGQENIEKDDNSADVDNKSYPPRDGDSSPPGSDQRSVGSIVNNGKDSKTPFPFKTGEGTGTPQQNGNLPEPHTLDRLYDRGKVIHASSADTLRKSALAAVSFSAEEDAALAASAGEAYDGRPSQLIRGRSPCSSPSSVSSCGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAEALDLNISPPKLLGDGLGASDNEKLADTEAGGSDVSQSRMARSTKTGSSSDSSFSVDDDEAVVGQQRGLGLPETCDNNDSS----SRPGVGKTCAPTSSRSTLTMSERGSCDDVSATVGASKYGGRVHHENPRKAPPPXXXXXXMPSEIRRKSMAAVSTGPAPVSFRDRSASK------------------------------------------------DSGVVTAQCEFCLRRYLKSAMSTHLQVCELRLVRCPFQCGVKVLVRNLEKHMGSCSTKESAEGEGLVNA 797
            VVLRQRAFFLSKVR AVQRMALVERRL+EQDNDLTEYRVTRSKAEGAVAAL+GRQ                              E+A TMKTALTAEMQRS+A+LDQ                                                                                                                              IRGVELTTASLERH T GEG ETARIRRELQDSEGSLQRRIEEVRASD+RR  EISGEV+RERE+RLKDRAEV                                                     E+EV NVRASL+RTEQYWH RIHDRL+RLE S+ ST+SDHSHT+S V SIGSQL+QLQLEIQNARDT RRAGQWASDRR EAPS AIG HH PILAQ +QSAARP QTTASTLA DSPKTALEESG+V+P+EQDGARGS N IA EEGVESTTGAMIPAVQACD QPT LECSSAVG+CSMPG V  ADATAGQ +I++DD   DVDNKS P RDGDS+P  S QRSVGS+V+NGKDS+T +PFKTGEGTGTP+Q G LPEP  +DRL+   K IH SSADTLR  ALAAVSFSAEEDAALAASA E  DG PSQLIRG SP SSPSSV SCG  XXXXXXXXXXXXXXX                           PAEALD N++PPKLLGDGLGASD+ K+ADTEAGGSDVSQSRMA STK GSSSDSSFSVDDDEAVVGQQRGLGL ETCDN+ S+    SRPG GKTCAPTSS ST T SERG+CDDVSAT G S YGGRVHH+NP+K PPP  XXX MP ++RRKSMAAVSTGPAPVSFRDRSASK                                                DSGVVTAQCEFCLRRYLKSAMSTHLQVCELRLVRCPFQCGVKVLVRNLEKHMGSCS KESAE EG+VNA
Sbjct:    6 VVLRQRAFFLSKVRGAVQRMALVERRLSEQDNDLTEYRVTRSKAEGAVAALRGRQ------------------------------ELATTMKTALTAEMQRSQAKLDQDKRWMEAILKKERKQHEDVMVAWKEQMDTLSQQVKEAETKWRRAEAADYGMRRNSIPVRWKHDTVAVHDSIQCYVASARVNALISEAKQTASSRWPSEPISNTSSQRMIETPHAPLFTFARCTENQIRGVELTTASLERHLTGGEGSETARIRRELQDSEGSLQRRIEEVRASDVRRMEEISGEVLRERENRLKDRAEVNRDSLWRHQTTWFTGSGKINERDTKPATMAHFRSVYPRAELSRMARDMRSVMVEKEVSNVRASLERTEQYWHGRIHDRLDRLEGSMASTLSDHSHTQSLVTSIGSQLKQLQLEIQNARDTRRRAGQWASDRRGEAPSRAIGNHHTPILAQVVQSAARPSQTTASTLAADSPKTALEESGEVLPEEQDGARGSTNTIAREEGVESTTGAMIPAVQACDDQPTPLECSSAVGLCSMPGGVTPADATAGQGSIDQDDYLGDVDNKSCPLRDGDSAPFKSGQRSVGSVVDNGKDSETQYPFKTGEGTGTPEQRGTLPEPPPVDRLHVHRKAIHTSSADTLR--ALAAVSFSAEEDAALAASAEEVGDGHPSQLIRGPSPRSSPSSVPSCGXXXXXXXXXXXXXXXXXHTPSVNSTGAPQADDPGGAEKYFAATSPAEALDPNVAPPKLLGDGLGASDSSKIADTEAGGSDVSQSRMAASTKPGSSSDSSFSVDDDEAVVGQQRGLGLRETCDNDHSTPTTTSRPGGGKTCAPTSSLSTSTTSERGTCDDVSATPGVSTYGGRVHHKNPQKGPPPRAXXXEMPLDMRRKSMAAVSTGPAPVSFRDRSASKVTGLVRTIFAETRRAAFSARIPTKLIVLFAEVTTEPLALRCMPVVSWQDSGVVTAQCEFCLRRYLKSAMSTHLQVCELRLVRCPFQCGVKVLVRNLEKHMGSCSMKESAESEGVVNA 1002          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6901.17886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSX8_ECTSI0.000e+081.45SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2E5_9PHAE0.000e+060.16SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..248
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 725..787
e-value: 1.5E-9
score: 39.4
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 736..788

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6901contigEcto-sp13_S_contig6901:2..6273 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6901.17886.1mRNA_Ecto-sp13_S_contig6901.17886.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6901 2..6273 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6901.17886.1 ID=prot_Ecto-sp13_S_contig6901.17886.1|Name=mRNA_Ecto-sp13_S_contig6901.17886.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=797bp
VVLRQRAFFLSKVREAVQRMALVERRLTEQDNDLTEYRVTRSKAEGAVAA
LQGRQTEARLSSLEDDISGLKASLGGRTPTQELSEEIAATMKTALTAEMQ
RSEARLDQIRGVELTTASLERHRTDGEGGETARIRRELQDSEGSLQRRIE
EVRASDLRRMEEISGEVVREREHRLKDRAEVEQEVFNVRASLQRTEQYWH
ERIHDRLNRLERSVESTVSDHSHTRSSVASIGSQLRQLQLEIQNARDTSR
RAGQWASDRREEAPSPAIGAHHMPILAQSMQSAARPPQTTASTLADSPKT
ALEESGKVIPKEQDGARGSPNIIAGEEGVESTTGAMIPAVQACDHQPTHL
ECSSAVGVCSMPGVVATADATAGQENIEKDDNSADVDNKSYPPRDGDSSP
PGSDQRSVGSIVNNGKDSKTPFPFKTGEGTGTPQQNGNLPEPHTLDRLYD
RGKVIHASSADTLRKSALAAVSFSAEEDAALAASAGEAYDGRPSQLIRGR
SPCSSPSSVSSCGSSAPSSSSPPPSPMSPPHTSSVNSTGAPQADDPGGAE
TPFAARTPAEALDLNISPPKLLGDGLGASDNEKLADTEAGGSDVSQSRMA
RSTKTGSSSDSSFSVDDDEAVVGQQRGLGLPETCDNNDSSSRPGVGKTCA
PTSSRSTLTMSERGSCDDVSATVGASKYGGRVHHENPRKAPPPRAPPPEM
PSEIRRKSMAAVSTGPAPVSFRDRSASKDSGVVTAQCEFCLRRYLKSAMS
THLQVCELRLVRCPFQCGVKVLVRNLEKHMGSCSTKESAEGEGLVNA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR008974TRAF-like