prot_Ecto-sp13_S_contig69006.17885.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69006.17885.1
Unique Nameprot_Ecto-sp13_S_contig69006.17885.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
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BLAST of mRNA_Ecto-sp13_S_contig69006.17885.1 vs. uniprot
Match: D7G424_ECTSI (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G424_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 3.050e-24
Identity = 48/55 (87.27%), Postives = 53/55 (96.36%), Query Frame = 0 
Query:   19 QVRPPILFIAAEHDQLCPVGTVREAAAQAINAKLSIHNKTHFDIYLGETLQVTVR 73
            +VRPPILFIAAEHDQLCPVGTVREAAAQAINAKLSIH+KTHFDIYLG+TLQ  ++
Sbjct:  295 KVRPPILFIAAEHDQLCPVGTVREAAAQAINAKLSIHDKTHFDIYLGDTLQAILK 349
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69006.17885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G424_ECTSI3.050e-2487.27AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..78
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 18..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69006contigEcto-sp13_S_contig69006:53..289 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69006.17885.1mRNA_Ecto-sp13_S_contig69006.17885.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69006 41..289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69006.17885.1 ID=prot_Ecto-sp13_S_contig69006.17885.1|Name=mRNA_Ecto-sp13_S_contig69006.17885.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
MLLLGPFAYAPVCNARETQVRPPILFIAAEHDQLCPVGTVREAAAQAINA
KLSIHNKTHFDIYLGETLQVTVRLRRLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase