prot_Ecto-sp13_S_contig6900.17884.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6900.17884.1
Unique Nameprot_Ecto-sp13_S_contig6900.17884.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length413
Homology
BLAST of mRNA_Ecto-sp13_S_contig6900.17884.1 vs. uniprot
Match: D8LM66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM66_ECTSI)

HSP 1 Score: 536 bits (1382), Expect = 6.990e-188
Identity = 334/405 (82.47%), Postives = 347/405 (85.68%), Query Frame = 0
Query:    1 MGGKVTARRDSISPPRRASSAASKSFLAVSGAVSRDWLRHEVGEEAAACLPVELGGDLDLAAWSWEGWVERRIKREDLAESNMNLAEVDSEFAPATWRYLDASHRLAEATGAQDYAHVLVEALQGGLTVPVAWVKRTLGDMVQAREAHQRTSSGGDVWVCVDRLCGMSRELVVVCPASNEADPLHISAEFEIDNSSDSFGLSLRRKRXXXXXXXXXXXXX-FALSSLPPLLSPGAAVTPTTAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLAGEAEKKNNKPRPAAHRDNGTGQADRRSSEGSYNRRPRSPQWEAAXXXXXXXXXXXXNGGVCGAGGRLSAFASTSAVPLSTTGGVGAAAXXXXXXAGEGGKDSWDRACVRVTVTTEMSYK 404
            MGGKVTARR +ISPPRRAS+AASKSFLAVSGAVSRDWLRHEVGEE AACLPVELGGDLDLAAWSWEGWV RRIKREDLAESNMNLAE DSEFAPATWRYLDA HR+AEATG QDYAHVL EAL+GGLTVPVAWVKRTLGDMVQAR+AH+RTSSGGDVWVCVDRLCGMSRELVVVCPA+NEADPLHISAEFEIDNSSDSFGL+LRRKR              FALSSLP LLSPGAAVTPTTA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       TP+AGEAE+KNNKP P AHR NGTGQA RRSSEGSYNRRPRSPQ EAA            +GG+CGAGGRLSAFA+ S VPLST GGVGAA XXXXXX    GK S DRACVRVTVTTEMSYK
Sbjct:    1 MGGKVTARRGTISPPRRASTAASKSFLAVSGAVSRDWLRHEVGEEVAACLPVELGGDLDLAAWSWEGWVGRRIKREDLAESNMNLAEADSEFAPATWRYLDACHRMAEATGTQDYAHVLAEALEGGLTVPVAWVKRTLGDMVQARQAHERTSSGGDVWVCVDRLCGMSRELVVVCPATNEADPLHISAEFEIDNSSDSFGLNLRRKREGGAALPSPLPPPPFALSSLPSLLSPGAAVTPTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------TPVAGEAEQKNNKPPPPAHRYNGTGQAHRRSSEGSYNRRPRSPQREAAAAVAAAVT----SGGICGAGGRLSAFATASTVPLSTRGGVGAAXXXXXXXXXXXGKVSRDRACVRVTVTTEMSYK 394          
BLAST of mRNA_Ecto-sp13_S_contig6900.17884.1 vs. uniprot
Match: A0A6H5KG52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG52_9PHAE)

HSP 1 Score: 397 bits (1020), Expect = 2.580e-127
Identity = 327/785 (41.66%), Postives = 334/785 (42.55%), Query Frame = 0
Query:    1 MGGKVTARRDSISPPRRASSAASKSFLAVSGAVSRDWLRHEVGEEAAACLPVELGGDLDLAAWSWEGWVERRIKREDLAESNMNLAEVDSEFAPATWRYLDASHRLAEATGAQDYAHVLVEALQGGLTVPVAWVKRTLGDMVQAREAHQ-----------------------------------------------------------------------------------------------------------------------RTSSGGDVWVCVDRLCGMSRELVVVCPASNEADPLHISAEFEIDNSSDSFGLSLRRKRXXXXXXXXXXXXXFALSSLPPLLSPGAAVTPTTAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATP------------LAGEAEKKNNKPRPAAHRDNGTGQADRRSSEGSYNRRPRSPQWEAAXXXXXXXXXXXXNGGVCGAGGRLSAFASTSAVPLSTTGGVGAAAXXXXXXAGEGGKDSWDRACVRVTVTTEMSYKV 405
            MGGKV ARR SISPPRRASSAASKSFLAVSGAVSRDWLRHEVGEE AACLPVELGGDLDLAAWSWEGWVERRIK+EDLAESNMNLAEV SEFAPATWRYLDASHRLAEATG QDYAHVLVEALQGGLTVPVAWVKRTLGDMVQAREAH+                                                                                                                       RTSSGGDVWVCVDRLCGMSRELVVVCPASNE D LHISAEFEIDNSSDSFGLSL +KR              A + LP LLSPGA+VTPTTAMT                  XXXXXXXXXXXXXXXXXXX                                                                                                                                                                                                                                                          TP            LAGEAEKKNNKPRP  H D+GTGQADRRSSEGSYNRRPRSPQ EAA            N GVCGAGGRLSAFASTSAVP ST GGVGAA       AGEGGKDS DRACVRVTVTTEMSYK+
Sbjct:   57 MGGKVKARRGSISPPRRASSAASKSFLAVSGAVSRDWLRHEVGEEVAACLPVELGGDLDLAAWSWEGWVERRIKKEDLAESNMNLAEVGSEFAPATWRYLDASHRLAEATGTQDYAHVLVEALQGGLTVPVAWVKRTLGDMVQAREAHEPPWRGASSGDGAKASTRRATSKGLNQEWAQLWKDMGRDIVEIRGERIDVSASGXXXXXXXXXXXXXXXXXXXXXXXGNPEVVLAPLAKEISRAGTEGGIVGLTEVQCFLAARDILLSTKRTSSGGDVWVCVDRLCGMSRELVVVCPASNETDSLHISAEFEIDNSSDSFGLSLSKKREGG-----------AAAPLPSLLSPGASVTPTTAMTAGTACGTSSGDKAGNVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPFSPLSATWNGTGSGRWSPVEMNSVLGVIPVGDYAMEAGGAADEKTAPGQQTPPARQPGRVSMPATTPQAASCVSACSEDAIYPSRRKSYPAPAALPLASPPRRGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPRPALXXXXXXXXGAGSVGVPTATGATTPVAAXXXXXXXXXLAGEAEKKNNKPRPPTHLDSGTGQADRRSSEGSYNRRPRSPQGEAAAAAAAT------NEGVCGAGGRLSAFASTSAVP-STRGGVGAATGAAGPGAGEGGKDSRDRACVRVTVTTEMSYKI 823          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6900.17884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM66_ECTSI6.990e-18882.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KG52_9PHAE2.580e-12741.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6900contigEcto-sp13_S_contig6900:896..5948 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6900.17884.1mRNA_Ecto-sp13_S_contig6900.17884.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6900 896..6409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6900.17884.1 ID=prot_Ecto-sp13_S_contig6900.17884.1|Name=mRNA_Ecto-sp13_S_contig6900.17884.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=413bp
MGGKVTARRDSISPPRRASSAASKSFLAVSGAVSRDWLRHEVGEEAAACL
PVELGGDLDLAAWSWEGWVERRIKREDLAESNMNLAEVDSEFAPATWRYL
DASHRLAEATGAQDYAHVLVEALQGGLTVPVAWVKRTLGDMVQAREAHQR
TSSGGDVWVCVDRLCGMSRELVVVCPASNEADPLHISAEFEIDNSSDSFG
LSLRRKREGGAAAAAPPPPPFALSSLPPLLSPGAAVTPTTAMTTGTASGT
SGGGKAGDVVGVPTATGAATPAAAPAAPAAATPLAGEAEKKNNKPRPAAH
RDNGTGQADRRSSEGSYNRRPRSPQWEAAAAAAAAAAAAATNGGVCGAGG
RLSAFASTSAVPLSTTGGVGAAAGAAGAGAGEGGKDSWDRACVRVTVTTE
MSYKVIKKTIFC*
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