mRNA_Ecto-sp13_S_contig69.17880.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig69.17880.1
Unique NamemRNA_Ecto-sp13_S_contig69.17880.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig69.17880.1 vs. uniprot
Match: D7FKJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ3_ECTSI)

HSP 1 Score: 577 bits (1487), Expect = 4.400e-199
Identity = 314/348 (90.23%), Postives = 326/348 (93.68%), Query Frame = 1 
Query:   40 MRVSASAVTLACAGCLSGTAAFQASLFQGAPLQRARAAAAVRDGASTAATSTDASARTRRTACRGSNXXXXXXXXXXXXXXXXXXXXVSRQDFFKQAGLSLAALAVGGATGAAPARAQTGSAVEVMRLRFGDKLRRAAKMLDELQDDILNNDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYAGVANSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGMEGGSLSATKAIVKLETSSALGMREIKVVPLEYVAKTLDQQGMFNSKSTKKIRPSS 1083
            MRVSASAVTLACAGCLSGTAAFQASLFQGAPLQRARAAAAVRDGASTA T+ DASART+RTACRGSN XXXX               VSR DFFKQAGLSLAA+A+GGATGAAPA+AQ GSAVEVMRLRFGDKLRRAAKMLDELQDDI N+DWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYA V+NSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIG+EGGSLSATKAIVKLETSSALGMREIKVVPL+YVAKT+DQQGMFNSK+TKK+RPSS
Sbjct:    1 MRVSASAVTLACAGCLSGTAAFQASLFQGAPLQRARAAAAVRDGASTATTTADASARTQRTACRGSNGXXXXSVGTRTTVVMDGGGSVSRLDFFKQAGLSLAAVAMGGATGAAPAKAQAGSAVEVMRLRFGDKLRRAAKMLDELQDDISNSDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYADVSNSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGVEGGSLSATKAIVKLETSSALGMREIKVVPLDYVAKTVDQQGMFNSKTTKKMRPSS 348
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BLAST of mRNA_Ecto-sp13_S_contig69.17880.1 vs. uniprot
Match: A0A7S3Y3I2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3I2_HETAK)

HSP 1 Score: 252 bits (644), Expect = 6.790e-74
Identity = 149/254 (58.66%), Postives = 175/254 (68.90%), Query Frame = 1 
Query:  301 VSRQDFFKQAGLSLAALAVG-GATGAAPARAQTGSAVEVMRLRFGDKLRRAAKMLDELQDDILNNDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYAGVANSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGMEG--GSLSATK--AIVKLETS--SALGMREIKVVPLEYVAKTLDQQG 1041
            V R+DFF  A    AAL +G G   A PA A    A E     +GD+LRR A+ LDELQ DI N DW+ V TYP  FR  VPVFT+YTDA F  +   D  SRVALRYEVGR +GAVERLKRAAE+++ REAQ+AFA +SVAYDRYLKAG LYD YD VTSTE F+A V +S+L++ PP+ DPPKIKD VLL AGPDKGKTG +IG+E   GS    K   IVKL+ +      +REIKVVP   VAK LD +G
Sbjct:   48 VGRRDFFAGA----AALGLGAGLMDALPAAAAPAPAKEAALKGYGDRLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDTEG 297
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BLAST of mRNA_Ecto-sp13_S_contig69.17880.1 vs. uniprot
Match: A0A0G4GSY0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GSY0_VITBC)

HSP 1 Score: 232 bits (592), Expect = 6.900e-66
Identity = 115/217 (53.00%), Postives = 158/217 (72.81%), Query Frame = 1 
Query:  424 RFGDKLRRAAKMLDELQDDILNNDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYAGVANSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGMEGGSLSATK--AIVKLETSSALGMREIKVVPLEYVAKTLDQQGMFNSKSTKK 1068
            +   ++R+ A +LDELQ DI + DWD++ +YP   R  VP+FTKYTD+AFP  DPVD  +R ALRYEVGR +G+VERLKRA ++++ RE + AFAAMSV++DRYLKAG+LY+ YD + STE F+ GV +S L YVPP +DPPKI+D VLL+ GPDKGKTG ++G+EG  ++  K   +VKL+T     +RE+KVVP  ++AK   +Q    S + K+
Sbjct:  107 KIAPRIRQIATVLDELQADIYDEDWDILASYPQQLRAYVPIFTKYTDSAFPGKDPVDENTRFALRYEVGRLFGSVERLKRAVDKKDVRETEEAFAAMSVSFDRYLKAGDLYEVYDPIISTEKFFEGVEDSQLVYVPPLRDPPKIRDQVLLLRGPDKGKTGILLGVEGDEVAKVKRKGVVKLDTKVG-SIRELKVVPYAFIAKRKGEQEPDESLAMKR 322
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BLAST of mRNA_Ecto-sp13_S_contig69.17880.1 vs. uniprot
Match: A0A7S3Y3T3_HETAK (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3T3_HETAK)

HSP 1 Score: 243 bits (620), Expect = 2.290e-65
Identity = 132/211 (62.56%), Postives = 156/211 (73.93%), Query Frame = 1 
Query:  427 FGDKLRRAAKMLDELQDDILNNDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYAGVANSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGMEG--GSLSATK--AIVKLETS--SALGMREIKVVPLEYVAKTLDQQG 1041
            +GD+LRR A+ LDELQ DI N DW+ V TYP  FR  VPVFT+YTDA F  +   D  SRVALRYEVGR +GAVERLKRAAE+++ REAQ+AFA +SVAYDRYLKAG LYD YD VTSTE F+A V +S+L++ PP+ DPPKIKD VLL AGPDKGKTG +IG+E   GS    K   IVKL+ +      +REIKVVP   VAK LD +G
Sbjct:  596 YGDRLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDTEG 806
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BLAST of mRNA_Ecto-sp13_S_contig69.17880.1 vs. uniprot
Match: A0A7R9UEJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEJ4_9STRA)

HSP 1 Score: 209 bits (533), Expect = 3.080e-59
Identity = 96/166 (57.83%), Postives = 130/166 (78.31%), Query Frame = 1 
Query:  424 RFGDKLRRAAKMLDELQDDILNNDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYAGVANSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGME 921
            R G+K+RR A++LD+LQ DI   DW  ++TYP   R+ VP+FTKYTD AFP++  +DT +R ALRYEVGRF+GAVERLKRA + ++  EA+++FA +S+++DRYLKAGNLY+ YD + STE FY G+ +  L +VPPS + PK +D VLL+AGPDKGKTG +IG+E
Sbjct:   39 RAGEKIRRIARILDDLQRDIFEEDWTFISTYPVELRSFVPIFTKYTDTAFPSESAIDTQTRFALRYEVGRFFGAVERLKRAVDSRDIGEAEASFAQISISFDRYLKAGNLYEQYDPIVSTEKFYEGIPDKDLVFVPPSAETPKTRDPVLLIAGPDKGKTGLLIGIE 204
[Close]
BLAST of mRNA_Ecto-sp13_S_contig69.17880.1 vs. uniprot
Match: B7FPD1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPD1_PHATC)

HSP 1 Score: 192 bits (489), Expect = 1.290e-51
Identity = 100/204 (49.02%), Postives = 137/204 (67.16%), Query Frame = 1 
Query:  427 FGDKLRRAAKMLDELQDDILNNDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYAGVANSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGMEGGSLSATKAIVKLETSSALGMREIKVVPLEYVAKTLDQQ 1038
               K+R    ++DELQ D++   WDLV +YP   R+ VPVFT YTD+AFP+D P D   RVALRYEVGRF+ +VER K+AA +Q   EA  A++ M++ +DRYL+ G LY  YD   STE ++ G+A+ +L Y  P  DPP ++D V+LV GP+KGKTG +IGM   S    K+++KL+     GMREI+VV  ++VAK L +Q
Sbjct:  110 LASKIRNIGSVMDELQRDLMQERWDLVESYPAQLRSFVPVFTTYTDSAFPSDAPTDKGLRVALRYEVGRFFASVERFKQAASRQALDEAYLAYSEMALHFDRYLRVGGLYTYYDDSISTEPYFQGIADDALVYSDPKTDPPFVRDLVILVRGPEKGKTGIIIGMY--SDGTNKSVIKLDRYK--GMREIRVVANDWVAKRLGEQ 309
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BLAST of mRNA_Ecto-sp13_S_contig69.17880.1 vs. uniprot
Match: A0A0G4FIK4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FIK4_9ALVE)

HSP 1 Score: 186 bits (473), Expect = 1.190e-49
Identity = 94/205 (45.85%), Postives = 137/205 (66.83%), Query Frame = 1 
Query:  436 KLRRAAKMLDELQDDILNNDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYAGVANSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGMEG---------GSLSATKAIVKLETSSALGMREIKVVPLEYVAK 1023
            ++R  A  L++L+ DI++ +W+LV  YP  F+T +P+FTKYTD AFP DD VD  +R ALRY VG FYGAV +L+R  E ++  +  +A+  +++A+DRYLKAG+LY  YD V STE F++ ++NS L+Y PP K+PP   D VLL+ GPDKGKTG ++ +E          G+    +AIV+L+      +REI+ +P  Y+AK
Sbjct:   92 RIRAIATTLEQLEKDIMDEEWELVDEYPEQFKTFLPLFTKYTDQAFPGDDEVDKNTRFALRYAVGSFYGAVAQLRRVVETRSKMDILAAYGQIALAFDRYLKAGDLYGAYDPVVSTEMFFSQISNSQLRYQPPEKNPPFPTDPVLLIKGPDKGKTGMLLSVEPFVKGLDDIPGNEERRRAIVRLDDKIGT-IREIRELPFTYIAK 295
[Close]
BLAST of mRNA_Ecto-sp13_S_contig69.17880.1 vs. uniprot
Match: A0A7S2UB68_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB68_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.690e-49
Identity = 96/202 (47.52%), Postives = 135/202 (66.83%), Query Frame = 1 
Query:  433 DKLRRAAKMLDELQDDILNNDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYAGVANSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGMEGGSLSATKAIVKLETSSALGMREIKVVPLEYVAKTLDQQ 1038
            +K+R   ++LDELQ D++   WDLV  YPN  R+ VPVFT YTD+AFP+D+P D   RVALRYEVGRF+ ++ER ++A  ++   EA  A++ M++ +DRYL  G LY  YD V +TE ++ G++ S+L Y  P KD P ++D ++LV GPDKGKTG +IG+     +     VKL+ S   GMREIK+VP  +  K L +Q
Sbjct:  137 NKIRSIGQVLDELQRDLMQERWDLVEQYPNQLRSYVPVFTTYTDSAFPSDEPTDKGLRVALRYEVGRFFASLERFRQAVARRALSEAYVAYSDMALHFDRYLHVGGLYTYYDDVVTTEVYFKGISESALVYADPIKDAPDVRDLIVLVKGPDKGKTGIVIGIYPDGTN--NCAVKLDRSK--GMREIKIVPRSWAGKRLGEQ 334
[Close]
BLAST of mRNA_Ecto-sp13_S_contig69.17880.1 vs. uniprot
Match: B8BUB6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUB6_THAPS)

HSP 1 Score: 187 bits (475), Expect = 2.090e-49
Identity = 96/204 (47.06%), Postives = 135/204 (66.18%), Query Frame = 1 
Query:  427 FGDKLRRAAKMLDELQDDILNNDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYAGVANSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGMEGGSLSATKAIVKLETSSALGMREIKVVPLEYVAKTLDQQ 1038
              +K+R  +K++DELQ D++   WDLV  YPN  R+ VPVFT YTD+AFPTD P D   RVALRYEVGRF+ ++ERLK A  +++  EA  A++ MS+ +DRYL+ G LY  YD   S E ++ G   ++L YV P KDP  ++D ++L  GPDKG+TG +IG+      +   +VKL+ +   G+REI+VVP  + AK L +Q
Sbjct:  132 LSNKIRGVSKVMDELQRDLMQERWDLVENYPNQLRSYVPVFTSYTDSAFPTDIPTDQGLRVALRYEVGRFFASLERLKTATSRRSINEAYVAYSDMSLHFDRYLRVGGLYTFYDDTVSLETYFQGTPETNLVYVDPKKDPALVRDLIVLREGPDKGRTGIVIGIYPDG--SNTCVVKLDRTR--GIREIRVVPCMWAAKRLGEQ 331
[Close]
BLAST of mRNA_Ecto-sp13_S_contig69.17880.1 vs. uniprot
Match: A0A7S2R2S4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2S4_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.810e-49
Identity = 106/236 (44.92%), Postives = 148/236 (62.71%), Query Frame = 1 
Query:  343 AALAVGGATGAAPARAQTGSAVEVMRLRFG---DKLRRAAKMLDELQDDILNNDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYAGVANSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGM-EGGSLSATKAIVKLETSSALGMREIKVVPLEYVAKTLDQQ 1038
            A L +G AT  AP  +   ++    + + G   +K+R+   ++DELQ D++   WDLV  YP   R+LVP+FT YTDAAFP++ P D   RVALRYEVGRF+G++ERLK+A  ++   EA  A++ MS+ YDRYL  G LY  YD+    E  YA +  S+L Y  P + PP+++D V+LV GPD GK G +IG+ + GS      +VKL+     GMR+IKVV   +VAK L +Q
Sbjct:   21 AVLTIGAATTVAPKISYAVASDLKPKPKLGGLPNKIRKVGGIMDELQRDLMQERWDLVEKYPPQLRSLVPIFTTYTDAAFPSEAPSDAGLRVALRYEVGRFFGSLERLKQATNRRALNEAYLAYSDMSLHYDRYLHVGGLYSYYDATIDNEPLYANIPRSALTYADPVRYPPEVRDLVILVKGPDMGKIGILIGLYDDGS---GNCVVKLD--QVKGMRDIKVVSKRWVAKRLGEQ 251
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69.17880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKJ3_ECTSI4.400e-19990.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3Y3I2_HETAK6.790e-7458.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4GSY0_VITBC6.900e-6653.00Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S3Y3T3_HETAK2.290e-6562.56Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A7R9UEJ4_9STRA3.080e-5957.83Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
B7FPD1_PHATC1.290e-5149.02Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A0G4FIK4_9ALVE1.190e-4945.85Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S2UB68_9STRA1.690e-4947.52Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8BUB6_THAPS2.090e-4947.06Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2R2S4_9STRA2.810e-4944.92Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69contigEcto-sp13_S_contig69:30266..38030 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score580.9
Seed ortholog evalue4.1e-163
Seed eggNOG ortholog2880.D7FKJ3
Model size2391
Hectar predicted targeting categorychloroplast
Exons8
EggNOG OGs2BGND@1,2S19T@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_001860.1
Cds size1047
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69.17880.1prot_Ecto-sp13_S_contig69.17880.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig69 31571..37991 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463948.0921037-UTR-Ecto-sp13_S_contig69:30265..315701681463948.0921037-UTR-Ecto-sp13_S_contig69:30265..31570Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig69 30266..31570 -
1681463948.180524-UTR-Ecto-sp13_S_contig69:37991..380301681463948.180524-UTR-Ecto-sp13_S_contig69:37991..38030Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig69 37992..38030 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463948.105252-CDS-Ecto-sp13_S_contig69:31570..316601681463948.105252-CDS-Ecto-sp13_S_contig69:31570..31660Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 31571..31660 -
1681463948.1143138-CDS-Ecto-sp13_S_contig69:32222..323541681463948.1143138-CDS-Ecto-sp13_S_contig69:32222..32354Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 32223..32354 -
1681463948.1232884-CDS-Ecto-sp13_S_contig69:32993..331161681463948.1232884-CDS-Ecto-sp13_S_contig69:32993..33116Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 32994..33116 -
1681463948.1321363-CDS-Ecto-sp13_S_contig69:33679..338031681463948.1321363-CDS-Ecto-sp13_S_contig69:33679..33803Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 33680..33803 -
1681463948.1410296-CDS-Ecto-sp13_S_contig69:34105..342301681463948.1410296-CDS-Ecto-sp13_S_contig69:34105..34230Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 34106..34230 -
1681463948.1501267-CDS-Ecto-sp13_S_contig69:34976..351441681463948.1501267-CDS-Ecto-sp13_S_contig69:34976..35144Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 34977..35144 -
1681463948.1591592-CDS-Ecto-sp13_S_contig69:36372..366171681463948.1591592-CDS-Ecto-sp13_S_contig69:36372..36617Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 36373..36617 -
1681463948.1706634-CDS-Ecto-sp13_S_contig69:37951..379911681463948.1706634-CDS-Ecto-sp13_S_contig69:37951..37991Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 37952..37991 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig69.17880.1

>prot_Ecto-sp13_S_contig69.17880.1 ID=prot_Ecto-sp13_S_contig69.17880.1|Name=mRNA_Ecto-sp13_S_contig69.17880.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=349bp
MRVSASAVTLACAGCLSGTAAFQASLFQGAPLQRARAAAAVRDGASTAAT
STDASARTRRTACRGSNGGGGSSVGTRTTVVMDGGGGVSRQDFFKQAGLS
LAALAVGGATGAAPARAQTGSAVEVMRLRFGDKLRRAAKMLDELQDDILN
NDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFY
GAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEG
FYAGVANSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGMEGGSLSA
TKAIVKLETSSALGMREIKVVPLEYVAKTLDQQGMFNSKSTKKIRPSS*
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mRNA from alignment at Ecto-sp13_S_contig69:30266..38030-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig69.17880.1 ID=mRNA_Ecto-sp13_S_contig69.17880.1|Name=mRNA_Ecto-sp13_S_contig69.17880.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7765bp|location=Sequence derived from alignment at Ecto-sp13_S_contig69:30266..38030- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGACGTGTGAGGTGTGCTTCCGCTGTCCCCGGAGAACGATGAGGGTATC
AGCATCAGCAGTAACGTTGGCTTGTGCAGGTGCGTTGTGATAGAGAGCGC
TTGGATGATACTGTTCTACGCGTGGTGTGAGAGGACTCAGGATGTCAAGT
AGTGTTTTCCTCCTCTGGACCGCAGCTGGAGACACAGACGCATGAACCTT
GTGGTATGCGGCAGCAGCAGTTGTTCATGACATTCACAGCCTTAATGGAC
CTACACTTCAAGGAAGGCGTTGTCTTACTGCTAGATTACTCTCACAGTAG
AGCGGATTCCAGTTGTTCTTCAGCATGTGGCCAACTCCAACTTTTGAATC
TGATCTGACGTGCTGACATCCCCACCTGTTGCCATTAACCTGTCAGCTGG
AGGAACGAATGTGCATGTGCTGGCCTTTGTCGTAAACCTACAGCATGTAG
CCTCTGACATATGGTAGAGAGCCTCCAGCAGCAGTGTGTCACATAGTTGA
CAAGAATCCGGTATCCTTAAACTGTCTGCCATTGTGAAGCTTTCAGTAGT
TGTTGTTGGACGAGACGGTTCAAGACAGATTGCAACGTACGCGAACAAGC
CGACCCAGCACATGCAACTTTCATGTTACCCCTGCCACCTGTACATCTAC
AACGTCGCAATGGGTGGGCGTTTTGCCACGGTCAGCAGGCTCACGGCCCA
GGTGTGAGAAGCAAGACGTCCAACCGGTTGCGATGCACCCAACGTGTTCG
GCCTCGAGACAGGGCTTCGTGTTTCGTTCTGTTCTAAAATTGTTGATACA
CATCGTTCAGCGCAGCAGCAGGTACCCCGGAGCAGAACGTCTTTCCTAAA
GGTATCGTACCCTTCTACCTGCGACGTACTACTGACTGCTGGACAGAGGC
ACTGCAGCAGCCCGATAGACAAGATGCAAGACGGCGCGCACAAACTGTCG
TGTTGAACCTATTATCCGCAGGGGAGATATCACTGCCCGGAAAGCGTGTG
CGAGGACCAACTTGTGTTGGACGTGCCTGTCCACGGATAGAGATGAAAAC
AGAGATGCAGTGTGAAGTGAAAAGAAGAGGCGACCGAAACCGCGGGTATG
TTGTAAAGGAAGCAAAGTCAGCAATGAACATACCTGCATGCACTAGCAAC
AGCAAGGCCAGAGTCCGGATTGCACAAATCGACCCCGCCTCATTCCTACC
CTATTGTGGTTATACCAAAGAAGTCTGGTGGCATACGTATCACGCACGGC
CAACTACCGAAAGTTGAACCTATGTGCAGCTTTGGTCGACTTCCGATTCC
CCGTCCATACCCATCCCCTTTAAATCACAAGGTAACGTAGGCATGCTCAA
CCTTGTACTCTGCACGCACGCTTTCCCCTTTCCACGAACTCCGACTATGT
GGTGGGTCTTCAGGGTGCCTCTCGGGCACCGCCGCCTTCCAAGCATCGCT
TTTCCAAGGCGCTCCTCTGCAACGAGCAAGAGCAGCAGCAGCGGTGCGAG
ATGGCGCGAGCACCGCGGCCACCTCAACGGACGCGTCAGCGCGGACACGA
CGCACGGCGTGCCGAGGGAGCAATGGCGGCGGCGGAAGCAGCGTGGGCAC
CCGAACAACAGTGGTGATGGACGGCGGCGGCGGGGTCTCTAGACAGGACT
TCTTCAAGGTGTGCTCAACCGGCATAGGAAGCCTGCTTGCCGGTAATTAA
CGACTGGCGTGGTCCGGTTTGGTGCTAGATTTAGAAAACCGGGCCGCCCG
GGGGGGGGGATACTCAGGGGGCTCTTGCCCCCGTTTAGGTTTTCTTACCC
GCCACATGACGCGGGTACCAGCATGTGTACGTGCGGCTCTTGCTGTAGGT
TGACAGCCATCTTGCTGTTTCAGCTGCGATTGAATCAGTGGTGGTAGCAA
GGCCGGGGGGGGGCAGGCGGTAACGAAGACAAGCCATGTCGCCGCAAACA
ACCCACTCCCGTCGGCATTATTACGCTGCCTGCAGCGCCTACCCTTCCTC
CGCCCCGACATGTTTGGGGTACTTGGATACGAGACCCGATCTGGACAGCA
GTGTGTGGGGGGGATATGCTGTTTGGGGTTCAAGTGCGGGGCCCCTCGAG
AGAGAGCACGCACATGTGTCTACTTTTTGGCTCGTTGTCTCGCCATGTCT
ATACTGTTGTGTGCAGGAAGGAGCGCGGTGTGATCATCAAGGCTTATGTC
ATCTCCATCGCTCCTGGGTTAACATGGTCCCCAAACTCTATTTCATGCTT
CCGTGAGAAGGCGCGGTAGCCTCCGTGGGAAGGCGCGGAGACAGCTAACA
CGTTGAATCCTTGTAGAGTCTGGGGACTATGTTGACCCAGGACCGACGTA
GATGAAATAAACCTTGACTATCACACCGTGCTCCTTCTAGCGTACAGAAG
TATAGAGCAAAGTTCATTCAGCGAACGCATGTGCGTGCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCGATCGAGGGGGCCCGCACTTGGAC
ACCCAATAGCATGCCCCCCCACCCACATCCTCTCCAGATTGGATCTCGTA
CCCAAACACGACATGATGCTGCGCACTCTCTCCTCTGCTTGCATCTCTGC
GGTCTCCGTTGTAGTTACCCCGAGTCTGTTCTCTCGTGTCGCCTGACCTT
GTACAGCGACGAAATCATTAAAAGTGGTTTTTCTTATTTGACAATAGGGG
AGTATTGCTGAACCGGTCACGTGATAGGAGCCGGAGGAAGTCAAGCACCT
CAGACGGGTTATCTCTGACTCATGGATGATACACAGGCCTCTTAGTACCA
CATTATTTGGCGTAGGCTCAAGAGTCCGTGAATAGAAACATGCACACCAT
TAACATTTTCGGTGGCCGTGCCTCCCTCGTGTGCAGCAAGCGGGGTTGAG
CCTGGCCGCCTTGGCAGTGGGAGGGGCGACAGGCGCAGCACCCGCCAGAG
CGCAGACGGGATCGGCTGTTGAGGTGATGCGCTTGAGGTTCGGCGACAAG
CTCCGACGAGCGGCGAAGATGCTGGACGAGCTGCAAGACGACATCTTGAA
CAACGTGAGACACACATAGCAGGCGGGCCAGAGCACAAAAGCCACACCAA
AGCTGATAGCGACGCGTGTGCTTGGGGGGCTGGCGCATCCTGACACTCCG
TGTGTTGATGGGCATATGCCCGGACGCTCTCTTTCGCTCCCGGCGCTTGT
GTTGCTGCCTTCTCTTTATTGCTCGGTTGCGGCTTTTGAGGACGAGAGAC
TCTTCGTGAAATAGGGGATAGGCTCCGCTATCGTCGACGTGGTTGGAGGG
TAGGGTTGGGCACGAGCTCCACTGCCTCCTGAGTTGCGAGCTTTTGCCCC
GTTGTATCATTGCTTCGTGCGGCGACACCCGTGGCCGGTCGGTAAGTTCG
AGATAAATGATGTAACCGCAGGCGCCTCTTGCCGCGAGGAAGGCGCAACA
CCGCCGTTACCCCCTGTTGCGATGTCGGTCGGCCGTTCACGAATTTTGTA
CCTACGGTGTGTTGTGTAGAGGTCGAAGGTTGAGCACTGCGGCCACCACC
GAAAGATGCGGTGATCAAACGAAGGGCGCCGTCTGCGTGCGCTGCTTGCC
CATCAGCATGTGACTTTGTTTTTCGTCCCCCAGTGTGCGCGAACAGGCCC
CCTGCTCTCGGGGCTCGTTCGACACTTTTCGACGCGAGTTCATCGAGGAA
CACCCTTGGCCATTTGATTGTTGTTGTTCGATTGTAGCATGAGTGTCGTA
TTTGTTTACCGTGGCGCGCACTCTATTTTTTTTTTTTACTCGTTTGGCAG
GACTGGGACCTTGTTACGACCTACCCGAACGCGTTCCGCACGCTGGTGCC
CGTGTTCACTAAGTACACAGATGCCGCCTTCCCGACGGACGACCCCGTGG
ACACCACCTCGAGGGTCGCGCTCAGGTGAGCCCACTGACCAGTGGCCAGG
GCGACAGGCAGAGATGGTATGAATGCGTGCATCTTCTTTCGAGCGCTACA
AAGAAAATGCGAGTTTTTCCTGCTCTGAGAGAAACAAAAAAAGGCGTCCT
GAAAATCGCGAAAAACGACCACCGCCACCTCCACACGCCGTGTGTTCTAT
CAACTTCCTTTGCCCCATACACTCTTTCCTGTTTTCGACAAGCCGCACCA
AGTCAATCCTGACGGAATCAACCAACCAAGTATCTGCTGTTGGTCTATCT
CTGTCGGCGTGATTGCTGTACCCGTAGGTACGAAGTCGGCCGATTCTACG
GAGCGGTTGAGCGCCTGAAGCGAGCGGCGGAGCAGCAAAACAGCAGAGAG
GCGCAGTCAGCCTTTGCGGCCATGTCTGTGGCCTACGACAGGTATCTCAA
GGTATGTATGTAAGCGGGAACAAAGGGTGAGATTTCATTGAGAATGGTGG
TACTTGAGAGAGACAGACAGACAGACAGACAGACAGAGAAAAAGCGGCTC
CACTTGACTGTGGATGTTGCACCAAACGGGTGTGGTTTCGTACTGAGAAC
TGGGCTCCGTAGGGGCGGAAGGTGCCTGGGTGGAGATCTGTATCCCGGTT
GCAGGAAGTTCCGGTTTTTTTTTTTTCTCTGCGCGTTCCTCTCGGTTCGG
GCGATCTCCGGACGTTGTGCTCTCGGGGGCAGGAGCGTCTCGAGGTAAGA
GACTACCAAGTGTGCGGCTACAAAGAAAAGGTTGGGATTGTGAAACGGCT
AGGGTAGGGAACGCTTACAAGTACACACCGATAGCATTTTTGTGTAACTA
TTCGATGAAAAATATCCTTGCTCGTAGATTTCAGACTAGGGAGTACAGCT
TCCATTTGCTTGCTGTTGCTGCGTCTGCGCTGCTCCTTGTTGTTGTCGAA
TGTCCGACGGTGCTCGCTCGTCTCTTGGTTTCCTTCCCTTCCCCGACGTG
TTTGTGTTGAATAGGCCGGTAACCTGTACGATGGGTACGACTCTGTTACG
TCCACCGAGGGCTTCTACGCGGGTGTGGCCAACAGCAGCCTCAAGTACGT
GCCTCCCAGCAAGGACCCTCCCAAGATTAAGGACAATGTGAGAGAGACGG
ACAGAGAGAGACACGCAAGACAGACAGAGAGAGACACGTACGAGAGATAG
AGAGCCGGCCGGGGGGGAGACAGCGAAGGAGAAGTTAGAGGGAGAGAACA
GGATAGAGAAACATACAAATACAACGTGTCGAAGGGAGAAATGGGATGGA
CGAGGCGGCGGAGAGAGAGAGGGACGAAGAAGTGACACGTATCGGCGAAG
GATTCGTGTTCTCCACTGGGCTGTCTTGTAGTGGAGGGGCTCCCCGAGGC
GCTTGACTCGCGTCGGTAACCGTGGTGGCATCATCTCCCGCGTCGAATAC
CGTATGCGAAGGCGGGGGTTGAATCGAAGCGAGACCTGGCCGTTTCGGCT
GTGTGCCCTTTGTTGCTCTCTTGAGTCTGATGCGCTCGAGTTTTATGCAG
TCGGTGAAACCAGCAACTGCTGCATCCCTATAGGTGGCTTGGTGTTTTCC
GGACGGAGTTTTTTTTTTTTCTGTTCTTCAAGCCACGTTGATCATACGGC
CAGATGAGTACATTTGATTACAACCCCCGGCCTCCATACGTGCCTGTAGA
GGGATGCGTGGCAGGTTGTTCGAGGCTGTTAGGTCAACCTCTAACCCCCC
CCCCCCTCCTCTTCGGGTAAATCCAGGTGCTCTTGGTGGCGGGCCCGGAC
AAGGGAAAGACTGGGTTCATGATCGGGATGGAAGGCGGGAGCTTGTCGGC
GACGAAGGCGATCGTCAAGCTGGAGACGAGCTCTGCGCTCGGCATGCGCG
AGATCAAGGTACGCGCTGCGGAGCTCTGCATGTTGAGATAGAGAACGAGA
AAGAGAGAGAAGGAGAGAAAGAAAGCGGCATCAGAATCCGCCATCTTCCT
TGCTTGCCGTTCATGCGCCTCGTTTTCTTTCGTTTGCTGTGCTGTCGGAG
AACCTATCACGTGATGAGCCGTACACGGCCGGTGGTCTTGATGGTAAACC
AGGTGAATACTCTTTGAGTTTTCGCCGTTCGTAGTCGTTCGTGGGAAACT
TGCGTGTGTTGTTCTCTAACGCCAGGGAGGTAGACAAGGCGGAGCCCGTG
AAGCGTGAAGTGTTTTTTTGTTTGGCTGATTCCCTTTTCCGCCCACCGCC
GGATGACATGACCGTTTTTCAGCCCCAAGTGTCCCCACACTCAAAACATA
AACGCTGCGCGCAACACACGTAGATTACCACGTGTTTTGCCTCTGAATCT
ACACCGAAACAAAAATGTATACTGCAATCCGACAATCGCATCACATCGTG
CTCGTTAGCATGTGTGCGTAAGTTCGCCCCCTCTACTGTACCCCTGCGCG
ATTGGATTTATTATTTGAAGGTCGTGCCGCTTGAGTACGTGGCCAAGACT
CTGGACCAGCAGGGCATGTTCAACAGCAAAAGCACGAAGAAGATTCGTCC
GTCTTCGTAGTATGCCTCCGTACCACCTCTTCGGGCACCTTCCGGTCTTT
GATGGCGGGGGGAGGATTGAGCATCGACGGCTGGGAGCCCGGCACACACA
GGGCCTTCGCAAGCAGTGCCAGCCGTGTGTCGCCTAGAATCGGCATGATG
AGTTAATTGGATGCCCACAGCATCGGTCGGGTGGCGTTGGCCGTCTATTT
GCTCGCGATTTGGAGAGGGATCATGTCGTCGTCCCACTGCCGACCCGTAG
GCCTACGTCCTGATGTGATGATGTGAGCCAACGACAACAAGGACAAACCA
TCATACATGGTCGATGATGGATTTCGGGCGGATTGTGCGGGCGCGAGATG
AGTGAACATGGGAACCGCGCAAGCAGGCAGGCACGGTCCATAGACTAGTT
GAAGCAGTTCCCCCGGCTCCAACGTTCAGGATGAGACGAAAGTTGCTTGC
CACACGGAGACTTTTATCGCACGAGAGGCGGCGTCCCGATTCCTACGGCA
CGGGGAAGGCGAAAAACGGAAGGAGGCGTGCACTTGCTTGCCTTGCTGTG
TTGAGTTTTCGGAGTTAGCGGCAACAACAGCATAGTGCCTTTCGTCTCAA
ATTTAGTTGTCTATCTTCCTCCCCCCCCCCCCATTCCCTCACCCTTTGAG
TGCAAGTAACGGTTAGATTTTTGTGCTTGCTTCGTGTGTTCCTTATTCTC
GGAAGGCCTTGTGGCAGACGTAAAGAACCCGTGTAACAAGGCTTGGTGAT
TGCAAATCGTTTCGTGGTTTTCTGTTTTTGCTCCACGCATGCGTCCGAAG
CAGAGCATGCGCAACGACACGAGCGCATGAATCCTTAGGGGGTACGCGAA
CCGCGGTAGGTAGGTAGATAGGTAGGAAGTAGGTTGGCACGTAAATAGAG
TACAACGAGGCTCTCTCAGCACGGCAAGGGTTTCGTATCTTCACTGCGTG
CAACAAAATAGAGGTAGGTGCGTCTTAACGTTTTGTGATTCGAGTCTCTC
GGTCAGCTTGTTGTGCTTGGATCTGACCACTCCTTGGTTTTCCGGAGTGC
GGAAGGTCTTGCCAGGGCGGTGTGTGTACCATCGCTAAGAACCCTCTGGT
CCGCCCCGACAAAATGCGGTGGTATATTTTTCAACGCTTTTATGAAGTAG
AACCACTGCTAACTTGTCGTTTCGGTTGGCATGGGTGGTGACTTTGTCTG
TCGTGGCTGCGAAAGTGCGGAAACGGAGAGGGGTTGAGTGGATCGACTGT
GTTGAGCTAGTGGATCCAAGCATTCACCTGACACTCCGCGTTCTCCCTTC
TCTGGTACGTGTGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig69:30266..38030-

>mRNA_Ecto-sp13_S_contig69.17880.1 ID=mRNA_Ecto-sp13_S_contig69.17880.1|Name=mRNA_Ecto-sp13_S_contig69.17880.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1047bp|location=Sequence derived from alignment at Ecto-sp13_S_contig69:30266..38030- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGGGTATCAGCATCAGCAGTAACGTTGGCTTGTGCAGGGTGCCTCTC
GGGCACCGCCGCCTTCCAAGCATCGCTTTTCCAAGGCGCTCCTCTGCAAC
GAGCAAGAGCAGCAGCAGCGGTGCGAGATGGCGCGAGCACCGCGGCCACC
TCAACGGACGCGTCAGCGCGGACACGACGCACGGCGTGCCGAGGGAGCAA
TGGCGGCGGCGGAAGCAGCGTGGGCACCCGAACAACAGTGGTGATGGACG
GCGGCGGCGGGGTCTCTAGACAGGACTTCTTCAAGCAAGCGGGGTTGAGC
CTGGCCGCCTTGGCAGTGGGAGGGGCGACAGGCGCAGCACCCGCCAGAGC
GCAGACGGGATCGGCTGTTGAGGTGATGCGCTTGAGGTTCGGCGACAAGC
TCCGACGAGCGGCGAAGATGCTGGACGAGCTGCAAGACGACATCTTGAAC
AACGACTGGGACCTTGTTACGACCTACCCGAACGCGTTCCGCACGCTGGT
GCCCGTGTTCACTAAGTACACAGATGCCGCCTTCCCGACGGACGACCCCG
TGGACACCACCTCGAGGGTCGCGCTCAGGTACGAAGTCGGCCGATTCTAC
GGAGCGGTTGAGCGCCTGAAGCGAGCGGCGGAGCAGCAAAACAGCAGAGA
GGCGCAGTCAGCCTTTGCGGCCATGTCTGTGGCCTACGACAGGTATCTCA
AGGCCGGTAACCTGTACGATGGGTACGACTCTGTTACGTCCACCGAGGGC
TTCTACGCGGGTGTGGCCAACAGCAGCCTCAAGTACGTGCCTCCCAGCAA
GGACCCTCCCAAGATTAAGGACAATGTGCTCTTGGTGGCGGGCCCGGACA
AGGGAAAGACTGGGTTCATGATCGGGATGGAAGGCGGGAGCTTGTCGGCG
ACGAAGGCGATCGTCAAGCTGGAGACGAGCTCTGCGCTCGGCATGCGCGA
GATCAAGGTCGTGCCGCTTGAGTACGTGGCCAAGACTCTGGACCAGCAGG
GCATGTTCAACAGCAAAAGCACGAAGAAGATTCGTCCGTCTTCGTAG
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