mRNA_Ecto-sp13_S_contig69.17879.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig69.17879.1
Unique NamemRNA_Ecto-sp13_S_contig69.17879.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: D7FKJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ2_ECTSI)

HSP 1 Score: 748 bits (1930), Expect = 9.520e-236
Identity = 369/374 (98.66%), Postives = 371/374 (99.20%), Query Frame = 2
Query:    2 LRNTEESWFRLRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGWGGDP 1123
            LRNTEES FRLRPG+VLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPS ALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNR EFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVL+TKLRYAISNCRAMDADDTSVGRTAAGLGWGGDP
Sbjct: 3851 LRNTEESLFRLRPGEVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSAALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRLEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLETKLRYAISNCRAMDADDTSVGRTAAGLGWGGDP 4224          
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A6H5KQU0_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU0_9PHAE)

HSP 1 Score: 735 bits (1897), Expect = 2.490e-231
Identity = 361/374 (96.52%), Postives = 369/374 (98.66%), Query Frame = 2
Query:    2 LRNTEESWFRLRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGWGGDP 1123
            LRNT+ S+FRLRPG+VLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPS ALH EMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHL G+ATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNR EFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFW+VLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSS+EVL+TKLRYA+SNCRAMDADDTSVGRTAAGLGWGGDP
Sbjct: 4023 LRNTKASFFRLRPGEVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSAALHDEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLGGIATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRLEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWNVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSQEVLETKLRYAMSNCRAMDADDTSVGRTAAGLGWGGDP 4396          
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A7S3H169_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H169_9STRA)

HSP 1 Score: 362 bits (928), Expect = 1.310e-110
Identity = 181/361 (50.14%), Postives = 239/361 (66.20%), Query Frame = 2
Query:   29 RLRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
            RLR  D LYST F+GEHA D GGPYRESF  Y  ELQS AL LL++ PN  + VG NREKW+ NP     G ++++  EM  FLG+LMG+A+RS++ L L+LPSIVWK LVR    ++DLE +DF+L +SL  +RNI++        F +     F   +AD     L  P G+ ++VT + R ++ D+   +++ E+     AIR GL+++VP+  L L +W +LE  VCG+ EVDV LLE+ T+Y+ C   D+H+  FW  +R FS  E+S  LRF WGRSRLPLSA  F Q FK+Q+F ++P DAY PVAHTCFFSLELP YSS E++K KLRYAI NC A+D DDT  G   A +GW
Sbjct:  273 RLRRSDKLYSTKFMGEHAVDGGGPYRESFMMYTQELQSTALSLLLRTPNGRHGVGFNREKWILNP-----GATSSVEMEMFAFLGKLMGIAMRSKDYLALNLPSIVWKLLVRDTPVKEDLEGIDFSLVRSLDLLRNINMDPALYAATFFET----FTTNSADDRLVEL-VPQGSTKDVTYETRHQYCDLVLNYRLHEFDRQAAAIRSGLSTIVPVALLSLCTWSQLETLVCGKPEVDVSLLESVTDYSSCAASDTHIQYFWQAMRDFSHEERSALLRFTWGRSRLPLSAADFPQRFKLQSFRKSPPDAYYPVAHTCFFSLELPCYSSLEIMKEKLRYAIFNCEAIDGDDTGSGEAIAAMGW 623          
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A7S2D6A2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6A2_9STRA)

HSP 1 Score: 344 bits (882), Expect = 4.850e-107
Identity = 169/359 (47.08%), Postives = 237/359 (66.02%), Query Frame = 2
Query:   35 RPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
            R  D +Y+ +F+GE +HDAGGPYRES++EY  EL+S +LPL+++ PN  +  G NRE+W+ NP+     P T    ++  FLG++MG+A+R+++ + L++  ++W  LV + +T + L  VD  L QS+  +R+I   GV+ +E F  + +  F     D     L  PGGA R+VT  +R E+AD  E ++M E+   V  IR GL+  +P   L LF+  ELE  VCG  ++D+DLLE+CTEY+ C   D HV  FW V+R FS  E+S+FLRF WGRSRLPL+A  F Q FK+ +F+R+PAD Y PVAHTCFF LELP+YSS  +++ KLRYAI NC A+D DDT VG  AA +GW
Sbjct:   30 RETDRVYNVIFMGERSHDAGGPYRESWSEYAHELESASLPLMLRTPNGRHSTGQNRERWVLNPS-----PLTQTKRDLFSFLGKMMGIAVRTRQFMALNVAPMIWDLLVGAEVTGEMLAGVDEMLIQSMTKIRHIENEGVS-EEMFEYVVMETFTTLATDDRSVEL-LPGGAQRDVTFSSRCEYADSVERYRMHEFDEQVACIREGLSRSLPTGLLSLFTGAELERMVCGTPDIDIDLLESCTEYSSCSANDQHVKFFWQVMREFSNEERSMFLRFTWGRSRLPLNAASFSQRFKLLSFSRSPADQYYPVAHTCFFQLELPQYSSPAIMRDKLRYAIYNCTAIDGDDTGVGMAAAAMGW 381          
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A835Z4N2_9STRA (HECT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N2_9STRA)

HSP 1 Score: 349 bits (896), Expect = 5.980e-106
Identity = 184/357 (51.54%), Postives = 239/357 (66.95%), Query Frame = 2
Query:   50 LYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGIN-REKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVA--TDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
            LY+T+F+GE A DAGGPYRE+FA Y  ELQS ALPLL++ PN+ +  G++ R+ WL NP     G ++ +  EML FLG+LMG A+R++E L L+L  +VWK LV    TR+DLE VD  L +S+ AVR     G    T++ F D  L  F     DG    L  PGG    VT  NR ++A + E+ ++ E +   EA+R GLA VVP+  L LF+W+E E  VCGR  VDV LLE+ TEY+ C R+D+HV  FW  LR+F   E+++FLRF WGR+RLPL+ADQF Q FK+Q+F R+PAD YLPVAHTCFFSLELP YSS EV+  KL YAI NC+A+D D+T     AA +G+
Sbjct:  271 LYTTLFMGERAQDAGGPYRETFAMYAQELQSAALPLLLRTPNAKHAAGLSGRDHWLLNP-----GATSPVQLEMLVFLGKLMGHAMRTREYLALNLSPLVWKALVGQEATREDLECVDMQLAKSMDAVRGKAADGTPSLTEDVFADAVLETFTAIALDGREVEL-RPGGRDEPVTWANRLDYATLVEQQRLNESKQQAEAVRAGLAMVVPLAVLSLFTWEEAEEMVCGRPGVDVALLESVTEYSGCRREDAHVRLFWTALRAFGDEERAMFLRFCWGRTRLPLTADQFAQRFKLQSFGRSPADDYLPVAHTCFFSLELPAYSSLEVMTKKLLYAIYNCQAIDGDETDTAMRAAAMGY 621          
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A7S2D583_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D583_9STRA)

HSP 1 Score: 344 bits (882), Expect = 4.320e-105
Identity = 169/359 (47.08%), Postives = 237/359 (66.02%), Query Frame = 2
Query:   35 RPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
            R  D +Y+ +F+GE +HDAGGPYRES++EY  EL+S +LPL+++ PN  +  G NRE+W+ NP+     P T    ++  FLG++MG+A+R+++ + L++  ++W  LV + +T + L  VD  L QS+  +R+I   GV+ +E F  + +  F     D     L  PGGA R+VT  +R E+AD  E ++M E+   V  IR GL+  +P   L LF+  ELE  VCG  ++D+DLLE+CTEY+ C   D HV  FW V+R FS  E+S+FLRF WGRSRLPL+A  F Q FK+ +F+R+PAD Y PVAHTCFF LELP+YSS  +++ KLRYAI NC A+D DDT VG  AA +GW
Sbjct:  174 RETDRVYNVIFMGERSHDAGGPYRESWSEYAHELESASLPLMLRTPNGRHSTGQNRERWVLNPS-----PLTQTKRDLFSFLGKMMGIAVRTRQFMALNVAPMIWDLLVGAEVTGEMLAGVDEMLIQSMTKIRHIENEGVS-EEMFEYVVMETFTTLATDDRSVEL-LPGGAQRDVTFSSRCEYADSVERYRMHEFDEQVACIREGLSRSLPTGLLSLFTGAELERMVCGTPDIDIDLLESCTEYSSCSANDQHVKFFWQVMREFSNEERSMFLRFTWGRSRLPLNAASFSQRFKLLSFSRSPADQYYPVAHTCFFQLELPQYSSPAIMRDKLRYAIYNCTAIDGDDTGVGMAAAAMGW 525          
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A1V9Y8E5_9STRA (HECT E3 ubiquitin ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8E5_9STRA)

HSP 1 Score: 333 bits (855), Expect = 7.310e-102
Identity = 170/362 (46.96%), Postives = 232/362 (64.09%), Query Frame = 2
Query:   26 FRLRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
            +  R  D +Y   F+GE+A DAGGPYRE+F +Y  ELQS  LPLL++ PN+ ++VG  REKW+ NP  G  G  + L   +  FLG++MG  +RS++ + LDL  ++WK LV  P+   DLE++D  L QS+  +R I   GV T+E F D+ L  F   + D     +  P G +  VT   R EFAD+ E F++ E+   +  +  GL  V+P+++L LF+ +E E  VCG  EV + LL+ CTEY+ C   D H+  FW  L +FS +E+S FLRF WGRSRLP S  +F Q FK+Q+F++TPAD+YLPVAHTCFF+LELP YSS+E+L  KL YAI NC+ +DAD  SV   A  LGW
Sbjct:  114 YHFRRSDNVYYVKFLGENAEDAGGPYRETFCQYSCELQSSQLPLLLRTPNAAHNVGAFREKWVLNP--GAFGSQSRLRRRLFEFLGKIMGAIVRSRDYIALDLALVMWKWLVHEPLQVSDLESMDRMLVQSMAKIRTIDSLGV-TEEMFEDIVLETFTTLSTDNRMVEIK-PNGKSIPVTFATRCEFADLVEHFRLHEFDQVLRYVELGLGKVLPLQYLHLFTANEFEKMVCGSPEVSISLLQQCTEYSSCAATDQHIVWFWATLNAFSHQERSAFLRFVWGRSRLPNSVAEFPQWFKLQSFSKTPADSYLPVAHTCFFALELPPYSSQELLSKKLLYAIYNCQEIDADGDSV--AANQLGW 469          
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A6A3Z2F3_9STRA (HECT domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z2F3_9STRA)

HSP 1 Score: 337 bits (863), Expect = 1.710e-100
Identity = 186/364 (51.10%), Postives = 232/364 (63.74%), Query Frame = 2
Query:   32 LRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPA----DAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
             R  D LY   F+GE+A DAGGPYRE+FA+YC ELQS  L L++  PNS ++VG+ REKWL +P     G  +A   +ML FLG+LMG +IRS++ L L+L  IVWK+L    +  DDL AVD  L  S+  +R I   GV T+E F D+ +  F    AD     L  PGGA   VT  +R E+AD+ E+ ++ E     +AI RGLA VVP + L  FS  ELE+ VCG  EVDVDLLE CTEY+ C   D H+  FW  LR FS  E+S FLRF WGRSRLP SAD+F Q FK+Q+F +  A    DAY+PVAHTCFFS+E+P YSS  VL+ KL YAI NC+ +D D  SV   A  LGW
Sbjct:  323 FRREDALYHVTFLGENAQDAGGPYRETFAQYCEELQSAQLSLILPTPNSQHNVGVGREKWLLSP-----GAQSATALQMLEFLGKLMGASIRSKQYLALNLAPIVWKKLAGERLGLDDLAAVDSMLVNSMSKMRTIDRYGV-TEEMFEDIVMETFTTLGADNRVIELK-PGGAHLPVTFSSRCEYADLVEQARLHESNDQAQAIFRGLAKVVPAKLLACFSSAELELMVCGSPEVDVDLLEKCTEYSSCSPTDDHIIWFWRALRDFSHEERSAFLRFVWGRSRLPASADEFPQRFKLQSFNQQRAGRSVDAYMPVAHTCFFSIEVPAYSSEAVLREKLLYAIYNCQEIDGDGDSV--AANQLGW 677          
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A6H5K114_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K114_9PHAE)

HSP 1 Score: 353 bits (906), Expect = 6.860e-100
Identity = 182/363 (50.14%), Postives = 242/363 (66.67%), Query Frame = 2
Query:   32 LRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGWGGD 1120
            LR    LY+ VF+GE + DAGGPYRES++ Y  ELQS ALPLLI+ PN V+  G+ R++++PNP     G ++    EM  FLG++MG AIRS+E + L+L  +VWK LV   +   DLE VD  LT+S++ +R I  +GV T   F D+ +  F   + D     L  PGG    VT DNR E+AD+ E+ ++ E    V+ IR+GLA VVP+  L +F+WDE+E  VCG+ EVDVDLLEA  EY+ C ++  H+  FW  LR F+P+E+S+ ++F WGR+RLPL+A+ F Q FK+Q FAR+PAD YLPVAHTCFFSLELP YSS EV+K +L +A  NC A+D DD   G  AA LGW  D
Sbjct: 5442 LRTHSKLYNCVFMGERSQDAGGPYRESWSMYAQELQSSALPLLIRTPNGVHAAGMGRDRYVPNP-----GATSPDQVEMFVFLGKIMGHAIRSKEYIGLNLSVVVWKALVGQEVQLSDLENVDVLLTRSMQDIRTIDQKGV-TRTLFSDIVMENFTAVSLDNREVELK-PGGKNISVTWDNRFEYADLMEKQRLSECCSMVKHIRKGLAMVVPLTVLGMFNWDEVETMVCGKPEVDVDLLEAIAEYSGCRKEQPHIKFFWQALREFTPQERSMLIKFTWGRTRLPLTAEGFSQRFKLQNFARSPADDYLPVAHTCFFSLELPAYSSLEVMKERLLFAAFNCSAIDGDDNFAGMNAAALGWDWD 5797          
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A8J5J0G7_9STRA (HECT domain-containing protein (Fragment) n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J0G7_9STRA)

HSP 1 Score: 334 bits (857), Expect = 5.460e-99
Identity = 183/364 (50.27%), Postives = 232/364 (63.74%), Query Frame = 2
Query:   32 LRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAF----ARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
             R  D LY   F+GE+A DAGGPYRE+FA+YC ELQS  LPL++  PNS ++VG+ REKWL +P     G  ++   +ML FLG+LMG +IRS++ L L+L  +VWK+L    +  DDL A+D  L  S+  +R I   GV T+E F D+ +  F    AD     L  PGGA   VT  +R E+AD+ E+ ++ E     +AI RGLA VVP + L  FS  ELE+ VCG  EVDV+LLE CTEY+ C   D H+  FW  LR FS  E+S FLRF WGRSRLP SAD+F Q FK+Q+F    A    DAY+PVAHTCFFS+E+P YSS  VL+ KL YAI NC+ +D D  SV   A  LGW
Sbjct:  382 FRREDALYHVTFLGENAQDAGGPYRETFAQYCEELQSTQLPLMLPTPNSQHNVGVGREKWLLSP-----GAQSSTTLQMLEFLGKLMGASIRSKQYLALNLAPLVWKKLAGERLVLDDLAAMDSMLVNSMSRMRTIDHYGV-TEEMFEDIVMETFTTLGADNQVIELK-PGGAHLPVTFSSRCEYADLVEQARLHESDDQAQAIFRGLAKVVPAKLLACFSGAELELMVCGLPEVDVNLLEKCTEYSSCSPTDDHIIWFWRALRDFSHEERSAFLRFVWGRSRLPASADEFPQRFKLQSFNMQRAGRSVDAYMPVAHTCFFSIEIPAYSSESVLREKLLYAIYNCQEIDGDGDSV--AANQLGW 736          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKJ2_ECTSI9.520e-23698.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQU0_9PHAE2.490e-23196.52HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3H169_9STRA1.310e-11050.14Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7S2D6A2_9STRA4.850e-10747.08Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835Z4N2_9STRA5.980e-10651.54HECT domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2D583_9STRA4.320e-10547.08Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1V9Y8E5_9STRA7.310e-10246.96HECT E3 ubiquitin ligase n=1 Tax=Thraustotheca cla... [more]
A0A6A3Z2F3_9STRA1.710e-10051.10HECT domain-containing protein n=5 Tax=Phytophthor... [more]
A0A6H5K114_9PHAE6.860e-10050.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J5J0G7_9STRA5.460e-9950.27HECT domain-containing protein (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69contigEcto-sp13_S_contig69:24873..29687 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score569.7
Seed ortholog evalue7.7e-160
Seed eggNOG ortholog2880.D7FKJ2
Model size2607
KEGG koko:K10614
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.RNA localization to chromatin
EggNOG OGsCOG5184@1,KOG1426@2759,KOG2242@1,KOG2242@2759
EC2.3.2.26
Cds size861
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69.17879.1prot_Ecto-sp13_S_contig69.17879.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig69 25564..28206 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463947.9724834-UTR-Ecto-sp13_S_contig69:24872..249671681463947.9724834-UTR-Ecto-sp13_S_contig69:24872..24967Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig69 24873..24967 +
1681463947.9850087-UTR-Ecto-sp13_S_contig69:25393..255631681463947.9850087-UTR-Ecto-sp13_S_contig69:25393..25563Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig69 25394..25563 +
1681463948.0616329-UTR-Ecto-sp13_S_contig69:28206..296871681463948.0616329-UTR-Ecto-sp13_S_contig69:28206..29687Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig69 28207..29687 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463947.9967022-CDS-Ecto-sp13_S_contig69:25563..256761681463947.9967022-CDS-Ecto-sp13_S_contig69:25563..25676Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 25564..25676 +
1681463948.010373-CDS-Ecto-sp13_S_contig69:25927..261801681463948.010373-CDS-Ecto-sp13_S_contig69:25927..26180Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 25928..26180 +
1681463948.0218606-CDS-Ecto-sp13_S_contig69:26451..266781681463948.0218606-CDS-Ecto-sp13_S_contig69:26451..26678Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 26452..26678 +
1681463948.0402367-CDS-Ecto-sp13_S_contig69:27141..272981681463948.0402367-CDS-Ecto-sp13_S_contig69:27141..27298Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 27142..27298 +
1681463948.0508249-CDS-Ecto-sp13_S_contig69:28095..282061681463948.0508249-CDS-Ecto-sp13_S_contig69:28095..28206Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig69 28096..28206 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig69.17879.1

>prot_Ecto-sp13_S_contig69.17879.1 ID=prot_Ecto-sp13_S_contig69.17879.1|Name=mRNA_Ecto-sp13_S_contig69.17879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp
MLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQ
SLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVT
LDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVF
VCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFA
WGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSRE
VLKTKLRYAISNCRAMDADDTSVGRTAAGLGWGGDP*
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mRNA from alignment at Ecto-sp13_S_contig69:24873..29687+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig69.17879.1 ID=mRNA_Ecto-sp13_S_contig69.17879.1|Name=mRNA_Ecto-sp13_S_contig69.17879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4815bp|location=Sequence derived from alignment at Ecto-sp13_S_contig69:24873..29687+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATTGAGGAATACGGAAGAGTCGTGGTTCCGGCTACGGCCGGGAGACGTGC TCTACAGTACGGTTTTTGTCGGAGAACATGCGCACGATGCGGGAGGTACG TCGTTGGTCAGTCGCAGCACGTGCTGTTTGCCTTGAGGTGATGGATCTTT TTTGGATGTTGTGCGTATCTGCGTGAGGAAGTCTGCGTGTTTGCTTGGTT TACGCGTGTTTGTTCGCTTCGTGTGACGGCATTGTTGTTCGCTTCCGACG TCTTCAAGAAGGCCGCCGCGCATTCCTAGTTTTGTTTGAACACCCTGCCC GACAACCGTCTCGATGTTCATCACGTTGCCGCAGCAGGCGCAAAAGCCGT GTGTTTTATACCCCCGCTTCATGCTTGCCGCTCTCCCTCCAGAATAAAGT GTGACAGTTGCCCCGGAGCGCCACTTCGCGACCTCGACAATAATACCTAT CCAAGCAGCATACATTACACACGCTTTCGAATGTTTTTCCCTCTGCCCCC GTCCTCTTGTCTCTCGTCTAGGCCCGTACCGCGAGTCCTTCGCCGAGTAT TGCGCCGAGCTTCAGTCTGGTGCGCTGCCGTTGCTGATCAAGTGTCCCAA CTCGGTGAACGACGTCGGCATCAACCGTGAGAAGTGGCTCCCGAACCCGG CCATCGGCAAGGTAGGCCCCAGCACGGCGCTGCACGCCGAGATGCTGGGT TTCCTCGGCCGTTTGATGGGCGTCGCAATTCGCTCTCAGGAGCCGCTCGA CCTGGACCTGCCTTCGATAGTCTGGAAGCAGCTCGTGCGCTCGCCGATTA CCAGGTAAAACAAATCCGGCGCTGGTGCACGACGATGGCAGGCTCGGGCG ATACCGATGAAAAATTTTTAGCCCTTGAGGAGAAAGGAGTACAACGGCTG GGAAAGTACGTTCCGACTATCAACGGCAAGCGCCGCCGTGAACTTGAGCC CCTTCTTTCTACACATAAAACCCGTCTACGAAGCCTCTGACACTGATTCA TGCCCGTCTCGCCACGTGCGTGGCCTTCGCCCCTCGAACCTCTCCAACCG CACAGGGACGACCTAGAGGCGGTCGATTTCGCGCTGACTCAAAGCCTCAA GGCCGTCCGCAACATCCACCTGCGAGGAGTTGCAACAGACGAGGCTTTCA GAGACCTGGGGCTCGGCGGGTTCGAGGTCGCCACCGCGGACGGCGGGAGG GCGGGGCTGCCGACTCCCGGTGGGGCCGCGCGGGAGGTGACCCTGGACAA CCGCCAGGAGTTCGCCGATATGGCGGAGGAATTCAAGATGCGAGAGTATC GGGTGCCGGTAAGGACAGCGTTGTGTGTTGGTGGTCTTGATGGCTGCTGT TGTTGCTCTGCACGGCTTCTCTTGCCGGTATGTAACATGCAGTTTCTGCC GGCCGTTTGAAAGCGGGGTCCCGCGTGTTGGCTGCTATACTTATCCGCGT GTTCAATTGTCTTACCTGTTTCGAGGTGCACTATCTCGTACATTATTAGC GTGTGCCCGATGATTTGTCTTTCAAGGAGTTCTCGCCCCTCGTTTTCTTC TGCCTTAATGATTCTGCACGCACGTGAAGGTGGAGGCCATCCGTCGCGGC CTGGCTTCCGTCGTCCCCATAGAGCACCTCAGGCTTTTCTCGTGGGACGA GCTGGAGGTGTTCGTGTGCGGCCGCAAGGAGGTGGACGTGGACCTCCTGG AGGCCTGCACGGAGTACACCCTGTGCTGCCGACAGGATTCGCACGTGTCG GCCTTCTGGGACGTGCTCAGGTCCTTCTCGCCGAGGGAGAAGTCGCTCTT CCTCAGGTACCGTTGCGTGCCGCAGTCGTCGTACTCGTCGTCGCCGTCGT AGCGCTGTGCGAATGGGTATGCCACAGAAACGTTCGCGCTCGCTCGGTTA CCCGGCTGCCTTGTTTACCGAAGAGCGAAAACCGCGCCCGCTCCCGTTTT TGAGTCACAGTGTGGTGGCTGTATACCGTACCATCCGGTGCCGCTAAGTG CGAAAATGGTGGCATACGATGCCGAGAGCTGCCTCAGAAGGGTTTCCATG TCGTCGCGATGGGTTGTTAAACTGGTTACGCCTGCTTCCAGAGGTTTCCT AGATTCTCTACCACCAGCAATGGCGTTACACCGCGTGAAGTACTGTACGC CAAGTAGTATGAAAGGACGGGCCCAGTACGGCCCCGGACGCCGGGTCACA TCGATCATCGTGTGTTGGCGGGCAGTCAAAACATGTCGCCTCTGCAATTT TTTTCTTTTTGCAACGCAGGTTCGCGTGGGGGCGATCGCGCCTACCGCTG AGCGCGGACCAGTTCCACCAGGCCTTCAAGATCCAGGCCTTCGCCCGCAC TCCCGCGGACGCCTACCTGCCCGTGGCGCACACGTGCTTCTTCAGCTTGG AACTGCCTCGTTACAGCAGCCGAGAGGTGGGATGAAGTGTGGATCACCCC GATACGCCCGGTTTGTCGTGTCTGTCGATGTTACTCAGGTAGTGAAGCTT TTTTTCTACAATTTTGTGATATGTCGATGTATTCGAGACTGTTTTACTGC CTTGTCGAACGCGTGGTGCAGTGGGTTGCAATTGGGTTGACGCAAGTTGA CGTCCGGTGAACAGAAGGCGAGGGAACGTTGGCGTGGGGTGAATACTAAT AGAACGGTGAGATCGACCGTTGAGGGTTGAAATCGTGAAAACATAGGGTG GAACTAGGGTGGAACTAGGGTGGAACTAGGGTGGAATGTGGTCAAGAGAG GTCAAGATGATGCCAAACCAAATAACGTTCGGGGTCCAAAGTCACCGTCA ACCCAATTGCAACCTCGATTCACCCGATTTCGACATGTATTGACCGGGGT TAAACTTTTGTATTAATTGCACCTTTTAAGGGTAAGTTAGCCTGCGACCA CGGGAATCGACCGCGTCGAGTGTTGGATCAGTACGGACATACGAAGGTAC TGGGTAGAGAGAGATCGGAATATTCTTTATGTGAAGACAACAACAGCAGC AACAACAACCAAGGCCAACATCGCTCAGTCCAACCACTGGCAATCCGGAT GTAGCCCTCTGTCAGCGCAATTTTACCCCGATCTCAATCTCGGTTGTCTT GATTTCACCCTCTCGCAGTTGATGCATGTGTGTCAATCCCCCCCCCCCCT CATATATGCTAATTTGTCGCTTGCCCATGTCACGACGCGGTCCACTGCCC GCACCGGACGCCAATCTTGTCAGGTCTTAAAGACAAAGCTTAGGTACGCA ATCTCCAACTGCCGCGCGATGGACGCGGACGATACGAGCGTCGGGCGAAC GGCTGCTGGCCTAGGTTGGGGCGGGGATCCGTGAGCAATGAACGAGGCGC GTTCAGCGCCGGTCGCGTGAGCTCAGTAGGTGATAGCAGTGTTCAATCCG TAGACGAGCGACCTGGGGAGATAAAGGGGTTGGATCGCGGGAGGTGACCG CCACTTCTTGTTCTAAGTGGCCGGTCGGGAATGTAAGAAATCGTGGTGAG TGAATACGCAGTGCGACGTTGTCCTGCTGTCTGTGAATGTGTTCGGGGGT GATTTTTTGAGACTACGTTTGTGTGTGTGCACACAGAGGTAGGTGTGTTG GTGTTGCTCTGTGTCCCCTTACATTGGGGGTACACTCTTGAGGTTTTTCT GATGTCGTTTCCTTTTCTTCCGGTGTGCTTTGTTTGGGTTTGGTCACAAA TGAGCGCCCATGCAACGTGTACGGTTGCGTGAAGCAAAGGATGCCGCCCT TTGTGTGCCTGGGTTGTCTGTGTATATACGTGTCTCGTCCTTGATGGTCT TTTAGTTCAAGATTGTTCCGTGTTTCATACTGTAGACTTCCGCACGGGAG TGGGCGCGGGATTCAGTCCTGATCGAACGTGAACAACACCAGCTGTCGGT GTCAACAGCGTGCAAGACCACCATCAACTATGAAACAGCGCGACATACAT TTTTGTGTTGTACGCTGCCCCTGTATGGAATTTTGACTAAAAGTATGGTA TGCAGCATTGTTTAAAGGGTTCTCTTCTCAGGAGGCGCTTCTTTTTGGGA CGATGGAATTCGTGTTGAATCGGAATTCGTGTTGAATCGTACACGCTTTG GATGATGGTGTAGTTTGTGCGTGATCGTTTGTCGGGGGCGACCGCAGGTT ATGAATCCGATAGCAGGAAAGGAAGGTTGTGTGTTTTGGTATCAGGCTCT GTACCTCGTTTGTAAGGTCAGTTTTCGTTTTTCGTGCTTTTTCTCGGGGC CCACCTGTCCTTTGGAAGGGTCTGAGACACGCAGGAATCGATGTCGCCCG AGCATGTCTACCTACGTGTACATCAAGCGGCGTTCGTGCTGTACAAAGGT GGCTCTTCTCATGATTTTGTGGGTGGCATTAGCTCTGTACGCACGGCAAG TGCTTTTGTGAACGGGTGTTGCACACAAGAATATCCCGGCAGGGTTTCCC CTTCTTGTGTTTTATGTTTTCAATCCGAGTTTTGGTCGATTCGAGGAGGG TGGCGCCGATGGATGCATGTTACCATTGACGCTCACAAGTGTCTCGTGTC CCTCTATTGTTCGTTGTTCCTCGTTGGTTGGCGCTCAAAAGTAGTGTGGA TGCACGATTCTTGAACTCGTGTGCTGAGTTTTCGAACGCTAACGTAAGCG GGGGGGGTCCGCTGGCGTCACGGGCAGGCACATGAGGTGATTGTGTTTTT TTCTCACCCTCCGAAAGCCACGCTACTACGCGCGCTTCTAGAACCTGTTT GTTACATAAGCAAATAACAGGCTAAATAACGGGAAACAGGACTTCCATTT TGTCCACCACTTGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig69:24873..29687+

>mRNA_Ecto-sp13_S_contig69.17879.1 ID=mRNA_Ecto-sp13_S_contig69.17879.1|Name=mRNA_Ecto-sp13_S_contig69.17879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig69:24873..29687+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGGGTTTCCTCGGCCGTTTGATGGGCGTCGCAATTCGCTCTCAGGA
GCCGCTCGACCTGGACCTGCCTTCGATAGTCTGGAAGCAGCTCGTGCGCT
CGCCGATTACCAGGGACGACCTAGAGGCGGTCGATTTCGCGCTGACTCAA
AGCCTCAAGGCCGTCCGCAACATCCACCTGCGAGGAGTTGCAACAGACGA
GGCTTTCAGAGACCTGGGGCTCGGCGGGTTCGAGGTCGCCACCGCGGACG
GCGGGAGGGCGGGGCTGCCGACTCCCGGTGGGGCCGCGCGGGAGGTGACC
CTGGACAACCGCCAGGAGTTCGCCGATATGGCGGAGGAATTCAAGATGCG
AGAGTATCGGGTGCCGGTGGAGGCCATCCGTCGCGGCCTGGCTTCCGTCG
TCCCCATAGAGCACCTCAGGCTTTTCTCGTGGGACGAGCTGGAGGTGTTC
GTGTGCGGCCGCAAGGAGGTGGACGTGGACCTCCTGGAGGCCTGCACGGA
GTACACCCTGTGCTGCCGACAGGATTCGCACGTGTCGGCCTTCTGGGACG
TGCTCAGGTCCTTCTCGCCGAGGGAGAAGTCGCTCTTCCTCAGGTTCGCG
TGGGGGCGATCGCGCCTACCGCTGAGCGCGGACCAGTTCCACCAGGCCTT
CAAGATCCAGGCCTTCGCCCGCACTCCCGCGGACGCCTACCTGCCCGTGG
CGCACACGTGCTTCTTCAGCTTGGAACTGCCTCGTTACAGCAGCCGAGAG
GTCTTAAAGACAAAGCTTAGGTACGCAATCTCCAACTGCCGCGCGATGGA
CGCGGACGATACGAGCGTCGGGCGAACGGCTGCTGGCCTAGGTTGGGGCG
GGGATCCGTGA
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