mRNA_Ecto-sp13_S_contig69.17879.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: D7FKJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ2_ECTSI) HSP 1 Score: 748 bits (1930), Expect = 9.520e-236 Identity = 369/374 (98.66%), Postives = 371/374 (99.20%), Query Frame = 2
Query: 2 LRNTEESWFRLRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGWGGDP 1123
LRNTEES FRLRPG+VLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPS ALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNR EFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVL+TKLRYAISNCRAMDADDTSVGRTAAGLGWGGDP
Sbjct: 3851 LRNTEESLFRLRPGEVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSAALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRLEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLETKLRYAISNCRAMDADDTSVGRTAAGLGWGGDP 4224
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A6H5KQU0_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU0_9PHAE) HSP 1 Score: 735 bits (1897), Expect = 2.490e-231 Identity = 361/374 (96.52%), Postives = 369/374 (98.66%), Query Frame = 2
Query: 2 LRNTEESWFRLRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGWGGDP 1123
LRNT+ S+FRLRPG+VLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPS ALH EMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHL G+ATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNR EFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFW+VLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSS+EVL+TKLRYA+SNCRAMDADDTSVGRTAAGLGWGGDP
Sbjct: 4023 LRNTKASFFRLRPGEVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSAALHDEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLGGIATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRLEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWNVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSQEVLETKLRYAMSNCRAMDADDTSVGRTAAGLGWGGDP 4396
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A7S3H169_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H169_9STRA) HSP 1 Score: 362 bits (928), Expect = 1.310e-110 Identity = 181/361 (50.14%), Postives = 239/361 (66.20%), Query Frame = 2
Query: 29 RLRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
RLR D LYST F+GEHA D GGPYRESF Y ELQS AL LL++ PN + VG NREKW+ NP G ++++ EM FLG+LMG+A+RS++ L L+LPSIVWK LVR ++DLE +DF+L +SL +RNI++ F + F +AD L P G+ ++VT + R ++ D+ +++ E+ AIR GL+++VP+ L L +W +LE VCG+ EVDV LLE+ T+Y+ C D+H+ FW +R FS E+S LRF WGRSRLPLSA F Q FK+Q+F ++P DAY PVAHTCFFSLELP YSS E++K KLRYAI NC A+D DDT G A +GW
Sbjct: 273 RLRRSDKLYSTKFMGEHAVDGGGPYRESFMMYTQELQSTALSLLLRTPNGRHGVGFNREKWILNP-----GATSSVEMEMFAFLGKLMGIAMRSKDYLALNLPSIVWKLLVRDTPVKEDLEGIDFSLVRSLDLLRNINMDPALYAATFFET----FTTNSADDRLVEL-VPQGSTKDVTYETRHQYCDLVLNYRLHEFDRQAAAIRSGLSTIVPVALLSLCTWSQLETLVCGKPEVDVSLLESVTDYSSCAASDTHIQYFWQAMRDFSHEERSALLRFTWGRSRLPLSAADFPQRFKLQSFRKSPPDAYYPVAHTCFFSLELPCYSSLEIMKEKLRYAIFNCEAIDGDDTGSGEAIAAMGW 623
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A7S2D6A2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6A2_9STRA) HSP 1 Score: 344 bits (882), Expect = 4.850e-107 Identity = 169/359 (47.08%), Postives = 237/359 (66.02%), Query Frame = 2
Query: 35 RPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
R D +Y+ +F+GE +HDAGGPYRES++EY EL+S +LPL+++ PN + G NRE+W+ NP+ P T ++ FLG++MG+A+R+++ + L++ ++W LV + +T + L VD L QS+ +R+I GV+ +E F + + F D L PGGA R+VT +R E+AD E ++M E+ V IR GL+ +P L LF+ ELE VCG ++D+DLLE+CTEY+ C D HV FW V+R FS E+S+FLRF WGRSRLPL+A F Q FK+ +F+R+PAD Y PVAHTCFF LELP+YSS +++ KLRYAI NC A+D DDT VG AA +GW
Sbjct: 30 RETDRVYNVIFMGERSHDAGGPYRESWSEYAHELESASLPLMLRTPNGRHSTGQNRERWVLNPS-----PLTQTKRDLFSFLGKMMGIAVRTRQFMALNVAPMIWDLLVGAEVTGEMLAGVDEMLIQSMTKIRHIENEGVS-EEMFEYVVMETFTTLATDDRSVEL-LPGGAQRDVTFSSRCEYADSVERYRMHEFDEQVACIREGLSRSLPTGLLSLFTGAELERMVCGTPDIDIDLLESCTEYSSCSANDQHVKFFWQVMREFSNEERSMFLRFTWGRSRLPLNAASFSQRFKLLSFSRSPADQYYPVAHTCFFQLELPQYSSPAIMRDKLRYAIYNCTAIDGDDTGVGMAAAAMGW 381
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A835Z4N2_9STRA (HECT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N2_9STRA) HSP 1 Score: 349 bits (896), Expect = 5.980e-106 Identity = 184/357 (51.54%), Postives = 239/357 (66.95%), Query Frame = 2
Query: 50 LYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGIN-REKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVA--TDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
LY+T+F+GE A DAGGPYRE+FA Y ELQS ALPLL++ PN+ + G++ R+ WL NP G ++ + EML FLG+LMG A+R++E L L+L +VWK LV TR+DLE VD L +S+ AVR G T++ F D L F DG L PGG VT NR ++A + E+ ++ E + EA+R GLA VVP+ L LF+W+E E VCGR VDV LLE+ TEY+ C R+D+HV FW LR+F E+++FLRF WGR+RLPL+ADQF Q FK+Q+F R+PAD YLPVAHTCFFSLELP YSS EV+ KL YAI NC+A+D D+T AA +G+
Sbjct: 271 LYTTLFMGERAQDAGGPYRETFAMYAQELQSAALPLLLRTPNAKHAAGLSGRDHWLLNP-----GATSPVQLEMLVFLGKLMGHAMRTREYLALNLSPLVWKALVGQEATREDLECVDMQLAKSMDAVRGKAADGTPSLTEDVFADAVLETFTAIALDGREVEL-RPGGRDEPVTWANRLDYATLVEQQRLNESKQQAEAVRAGLAMVVPLAVLSLFTWEEAEEMVCGRPGVDVALLESVTEYSGCRREDAHVRLFWTALRAFGDEERAMFLRFCWGRTRLPLTADQFAQRFKLQSFGRSPADDYLPVAHTCFFSLELPAYSSLEVMTKKLLYAIYNCQAIDGDETDTAMRAAAMGY 621
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A7S2D583_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D583_9STRA) HSP 1 Score: 344 bits (882), Expect = 4.320e-105 Identity = 169/359 (47.08%), Postives = 237/359 (66.02%), Query Frame = 2
Query: 35 RPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
R D +Y+ +F+GE +HDAGGPYRES++EY EL+S +LPL+++ PN + G NRE+W+ NP+ P T ++ FLG++MG+A+R+++ + L++ ++W LV + +T + L VD L QS+ +R+I GV+ +E F + + F D L PGGA R+VT +R E+AD E ++M E+ V IR GL+ +P L LF+ ELE VCG ++D+DLLE+CTEY+ C D HV FW V+R FS E+S+FLRF WGRSRLPL+A F Q FK+ +F+R+PAD Y PVAHTCFF LELP+YSS +++ KLRYAI NC A+D DDT VG AA +GW
Sbjct: 174 RETDRVYNVIFMGERSHDAGGPYRESWSEYAHELESASLPLMLRTPNGRHSTGQNRERWVLNPS-----PLTQTKRDLFSFLGKMMGIAVRTRQFMALNVAPMIWDLLVGAEVTGEMLAGVDEMLIQSMTKIRHIENEGVS-EEMFEYVVMETFTTLATDDRSVEL-LPGGAQRDVTFSSRCEYADSVERYRMHEFDEQVACIREGLSRSLPTGLLSLFTGAELERMVCGTPDIDIDLLESCTEYSSCSANDQHVKFFWQVMREFSNEERSMFLRFTWGRSRLPLNAASFSQRFKLLSFSRSPADQYYPVAHTCFFQLELPQYSSPAIMRDKLRYAIYNCTAIDGDDTGVGMAAAAMGW 525
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A1V9Y8E5_9STRA (HECT E3 ubiquitin ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8E5_9STRA) HSP 1 Score: 333 bits (855), Expect = 7.310e-102 Identity = 170/362 (46.96%), Postives = 232/362 (64.09%), Query Frame = 2
Query: 26 FRLRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
+ R D +Y F+GE+A DAGGPYRE+F +Y ELQS LPLL++ PN+ ++VG REKW+ NP G G + L + FLG++MG +RS++ + LDL ++WK LV P+ DLE++D L QS+ +R I GV T+E F D+ L F + D + P G + VT R EFAD+ E F++ E+ + + GL V+P+++L LF+ +E E VCG EV + LL+ CTEY+ C D H+ FW L +FS +E+S FLRF WGRSRLP S +F Q FK+Q+F++TPAD+YLPVAHTCFF+LELP YSS+E+L KL YAI NC+ +DAD SV A LGW
Sbjct: 114 YHFRRSDNVYYVKFLGENAEDAGGPYRETFCQYSCELQSSQLPLLLRTPNAAHNVGAFREKWVLNP--GAFGSQSRLRRRLFEFLGKIMGAIVRSRDYIALDLALVMWKWLVHEPLQVSDLESMDRMLVQSMAKIRTIDSLGV-TEEMFEDIVLETFTTLSTDNRMVEIK-PNGKSIPVTFATRCEFADLVEHFRLHEFDQVLRYVELGLGKVLPLQYLHLFTANEFEKMVCGSPEVSISLLQQCTEYSSCAATDQHIVWFWATLNAFSHQERSAFLRFVWGRSRLPNSVAEFPQWFKLQSFSKTPADSYLPVAHTCFFALELPPYSSQELLSKKLLYAIYNCQEIDADGDSV--AANQLGW 469
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A6A3Z2F3_9STRA (HECT domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z2F3_9STRA) HSP 1 Score: 337 bits (863), Expect = 1.710e-100 Identity = 186/364 (51.10%), Postives = 232/364 (63.74%), Query Frame = 2
Query: 32 LRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPA----DAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
R D LY F+GE+A DAGGPYRE+FA+YC ELQS L L++ PNS ++VG+ REKWL +P G +A +ML FLG+LMG +IRS++ L L+L IVWK+L + DDL AVD L S+ +R I GV T+E F D+ + F AD L PGGA VT +R E+AD+ E+ ++ E +AI RGLA VVP + L FS ELE+ VCG EVDVDLLE CTEY+ C D H+ FW LR FS E+S FLRF WGRSRLP SAD+F Q FK+Q+F + A DAY+PVAHTCFFS+E+P YSS VL+ KL YAI NC+ +D D SV A LGW
Sbjct: 323 FRREDALYHVTFLGENAQDAGGPYRETFAQYCEELQSAQLSLILPTPNSQHNVGVGREKWLLSP-----GAQSATALQMLEFLGKLMGASIRSKQYLALNLAPIVWKKLAGERLGLDDLAAVDSMLVNSMSKMRTIDRYGV-TEEMFEDIVMETFTTLGADNRVIELK-PGGAHLPVTFSSRCEYADLVEQARLHESNDQAQAIFRGLAKVVPAKLLACFSSAELELMVCGSPEVDVDLLEKCTEYSSCSPTDDHIIWFWRALRDFSHEERSAFLRFVWGRSRLPASADEFPQRFKLQSFNQQRAGRSVDAYMPVAHTCFFSIEVPAYSSEAVLREKLLYAIYNCQEIDGDGDSV--AANQLGW 677
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A6H5K114_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K114_9PHAE) HSP 1 Score: 353 bits (906), Expect = 6.860e-100 Identity = 182/363 (50.14%), Postives = 242/363 (66.67%), Query Frame = 2
Query: 32 LRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAFARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGWGGD 1120
LR LY+ VF+GE + DAGGPYRES++ Y ELQS ALPLLI+ PN V+ G+ R++++PNP G ++ EM FLG++MG AIRS+E + L+L +VWK LV + DLE VD LT+S++ +R I +GV T F D+ + F + D L PGG VT DNR E+AD+ E+ ++ E V+ IR+GLA VVP+ L +F+WDE+E VCG+ EVDVDLLEA EY+ C ++ H+ FW LR F+P+E+S+ ++F WGR+RLPL+A+ F Q FK+Q FAR+PAD YLPVAHTCFFSLELP YSS EV+K +L +A NC A+D DD G AA LGW D
Sbjct: 5442 LRTHSKLYNCVFMGERSQDAGGPYRESWSMYAQELQSSALPLLIRTPNGVHAAGMGRDRYVPNP-----GATSPDQVEMFVFLGKIMGHAIRSKEYIGLNLSVVVWKALVGQEVQLSDLENVDVLLTRSMQDIRTIDQKGV-TRTLFSDIVMENFTAVSLDNREVELK-PGGKNISVTWDNRFEYADLMEKQRLSECCSMVKHIRKGLAMVVPLTVLGMFNWDEVETMVCGKPEVDVDLLEAIAEYSGCRKEQPHIKFFWQALREFTPQERSMLIKFTWGRTRLPLTAEGFSQRFKLQNFARSPADDYLPVAHTCFFSLELPAYSSLEVMKERLLFAAFNCSAIDGDDNFAGMNAAALGWDWD 5797
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Match: A0A8J5J0G7_9STRA (HECT domain-containing protein (Fragment) n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J0G7_9STRA) HSP 1 Score: 334 bits (857), Expect = 5.460e-99 Identity = 183/364 (50.27%), Postives = 232/364 (63.74%), Query Frame = 2
Query: 32 LRPGDVLYSTVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKVGPSTALHAEMLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQSLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRQEFADMAEEFKMREYRVPVEAIRRGLASVVPIEHLRLFSWDELEVFVCGRKEVDVDLLEACTEYTLCCRQDSHVSAFWDVLRSFSPREKSLFLRFAWGRSRLPLSADQFHQAFKIQAF----ARTPADAYLPVAHTCFFSLELPRYSSREVLKTKLRYAISNCRAMDADDTSVGRTAAGLGW 1111
R D LY F+GE+A DAGGPYRE+FA+YC ELQS LPL++ PNS ++VG+ REKWL +P G ++ +ML FLG+LMG +IRS++ L L+L +VWK+L + DDL A+D L S+ +R I GV T+E F D+ + F AD L PGGA VT +R E+AD+ E+ ++ E +AI RGLA VVP + L FS ELE+ VCG EVDV+LLE CTEY+ C D H+ FW LR FS E+S FLRF WGRSRLP SAD+F Q FK+Q+F A DAY+PVAHTCFFS+E+P YSS VL+ KL YAI NC+ +D D SV A LGW
Sbjct: 382 FRREDALYHVTFLGENAQDAGGPYRETFAQYCEELQSTQLPLMLPTPNSQHNVGVGREKWLLSP-----GAQSSTTLQMLEFLGKLMGASIRSKQYLALNLAPLVWKKLAGERLVLDDLAAMDSMLVNSMSRMRTIDHYGV-TEEMFEDIVMETFTTLGADNQVIELK-PGGAHLPVTFSSRCEYADLVEQARLHESDDQAQAIFRGLAKVVPAKLLACFSGAELELMVCGLPEVDVNLLEKCTEYSSCSPTDDHIIWFWRALRDFSHEERSAFLRFVWGRSRLPASADEFPQRFKLQSFNMQRAGRSVDAYMPVAHTCFFSIEIPAYSSESVLREKLLYAIYNCQEIDGDGDSV--AANQLGW 736 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69.17879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig69.17879.1 >prot_Ecto-sp13_S_contig69.17879.1 ID=prot_Ecto-sp13_S_contig69.17879.1|Name=mRNA_Ecto-sp13_S_contig69.17879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp MLGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQback to top mRNA from alignment at Ecto-sp13_S_contig69:24873..29687+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig69.17879.1 ID=mRNA_Ecto-sp13_S_contig69.17879.1|Name=mRNA_Ecto-sp13_S_contig69.17879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4815bp|location=Sequence derived from alignment at Ecto-sp13_S_contig69:24873..29687+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig69:24873..29687+ >mRNA_Ecto-sp13_S_contig69.17879.1 ID=mRNA_Ecto-sp13_S_contig69.17879.1|Name=mRNA_Ecto-sp13_S_contig69.17879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig69:24873..29687+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |