prot_Ecto-sp13_S_contig69.17877.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69.17877.1
Unique Nameprot_Ecto-sp13_S_contig69.17877.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
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BLAST of mRNA_Ecto-sp13_S_contig69.17877.1 vs. uniprot
Match: A0A6H5KQU0_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU0_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.010e-35
Identity = 72/82 (87.80%), Postives = 76/82 (92.68%), Query Frame = 0 
Query:    1 QHQGSSRIETDPSAQASAASRCSRSRIGVVIALEKWGERDGAGVRVRWATEQVDTAAAA-AGATKDQGREGFEALYCVQNPA 81
            Q QGS+RI TDPSAQASA+SRCSRSRIGVV+ALEKWGER GAGVRVRW TEQVDTA AA AGAT+DQGREGFEALYCVQNPA
Sbjct: 2088 QQQGSTRIGTDPSAQASASSRCSRSRIGVVVALEKWGERGGAGVRVRWVTEQVDTAVAATAGATEDQGREGFEALYCVQNPA 2169
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BLAST of mRNA_Ecto-sp13_S_contig69.17877.1 vs. uniprot
Match: D7FKJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ2_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 3.510e-35
Identity = 72/82 (87.80%), Postives = 75/82 (91.46%), Query Frame = 0 
Query:    1 QHQGSSRIETDPSAQASAASRCSRSRIGVVIALEKWGERDGAGVRVRWATEQVDTAAAAA-GATKDQGREGFEALYCVQNPA 81
            Q QGSSRI TDPSAQASA+SRCSR RIGVV+ALEKWGERD AGVRVRWATE VDTAAAAA GA +DQGREGFEALYCVQNPA
Sbjct: 1542 QQQGSSRIGTDPSAQASASSRCSRPRIGVVVALEKWGERDAAGVRVRWATEYVDTAAAAAAGAKRDQGREGFEALYCVQNPA 1623
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69.17877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQU0_9PHAE1.010e-3587.80HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FKJ2_ECTSI3.510e-3587.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69contigEcto-sp13_S_contig69:14669..14911 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69.17877.1mRNA_Ecto-sp13_S_contig69.17877.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69 14669..14913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69.17877.1 ID=prot_Ecto-sp13_S_contig69.17877.1|Name=mRNA_Ecto-sp13_S_contig69.17877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
QHQGSSRIETDPSAQASAASRCSRSRIGVVIALEKWGERDGAGVRVRWAT
EQVDTAAAAAGATKDQGREGFEALYCVQNPA
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