prot_Ecto-sp13_S_contig69.17876.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69.17876.1
Unique Nameprot_Ecto-sp13_S_contig69.17876.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length207
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig69.17876.1 vs. uniprot
Match: D7FKJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ2_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 1.160e-109
Identity = 182/207 (87.92%), Postives = 190/207 (91.79%), Query Frame = 0 
Query:    1 ADWPKSPGPEKDRLSTPPRADHAAERDAKEAERHCGLSLGAETANASTAATRESPRALERXXXXXXRKLLGGGGSGAQAVEDVASIWSALRDIARGTAPGRLLVKDFLPMLTEACSVVVQSAHPFDRLAQRRVVLVPGAVGVQVRFDHRTEMQQDDRIVIRDPARRQPMAGRLAVATTLSQHADSGCWSGIGMDAPMLEGCNLLRDG 207
            ADWPKSPGPEKDRL TPPRADHAAERDAKEAERHC LS GAETANAS AATRESP+ LER       KLLGGGG+GA+AVEDVASIWSALRD +RGTAPGRLLVKDFLPMLTEACSV+VQSAHPFDRLAQRRVVLVPGAVGVQVRFDHRTEM+QDDRIVIRDPARRQP+AGR  VATTLSQHADSGCWSGIG DAPM+E CNLLRDG
Sbjct: 1301 ADWPKSPGPEKDRLGTPPRADHAAERDAKEAERHCDLSPGAETANASPAATRESPKTLER-------KLLGGGGAGAEAVEDVASIWSALRDFSRGTAPGRLLVKDFLPMLTEACSVIVQSAHPFDRLAQRRVVLVPGAVGVQVRFDHRTEMRQDDRIVIRDPARRQPVAGRSVVATTLSQHADSGCWSGIGKDAPMVESCNLLRDG 1500
[Close]
BLAST of mRNA_Ecto-sp13_S_contig69.17876.1 vs. uniprot
Match: A0A6H5KQU0_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU0_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 1.990e-97
Identity = 172/209 (82.30%), Postives = 181/209 (86.60%), Query Frame = 0 
Query:    1 ADWPKSPGPEKDRLSTPPRADHAAERDAKEAERHC-GLSLGAETANASTAATRESPRALERXXXXXXRKLLG-GGGSGAQAVEDVASIWSALRDIARGTAPGRLLVKDFLPMLTEACSVVVQSAHPFDRLAQRRVVLVPGAVGVQVRFDHRTEMQQDDRIVIRDPARRQPMAGRLAVATTLSQHADSGCWSGIGMDAPMLEGCNLLRDG 207
            ADWPKSP PEKDRL TPPRADHAAERDA EAER C  LS GAE A AS AATRESP+A ER        LLG GGG+GA+AVEDVASIWSALR+ +RGTAPGRLLVKDFLPMLTEACSVVVQSAHPFDRLAQRRVVLVPGAVGVQVRFDHRTEM+Q DRIVIRDPARRQP+AG  AVATTL QHAD+GCWSGIG  APM+E CNLLRDG
Sbjct: 1845 ADWPKSPAPEKDRLGTPPRADHAAERDANEAERPCCDLSPGAEAAKASPAATRESPKASER-------NLLGAGGGAGAEAVEDVASIWSALRNFSRGTAPGRLLVKDFLPMLTEACSVVVQSAHPFDRLAQRRVVLVPGAVGVQVRFDHRTEMRQHDRIVIRDPARRQPLAGGSAVATTLGQHADAGCWSGIGKAAPMVESCNLLRDG 2046
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69.17876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKJ2_ECTSI1.160e-10987.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQU0_9PHAE1.990e-9782.30HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69contigEcto-sp13_S_contig69:13925..14545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69.17876.1mRNA_Ecto-sp13_S_contig69.17876.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69 13925..14545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69.17876.1 ID=prot_Ecto-sp13_S_contig69.17876.1|Name=mRNA_Ecto-sp13_S_contig69.17876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp
ADWPKSPGPEKDRLSTPPRADHAAERDAKEAERHCGLSLGAETANASTAA
TRESPRALERTPRALERKLLGGGGSGAQAVEDVASIWSALRDIARGTAPG
RLLVKDFLPMLTEACSVVVQSAHPFDRLAQRRVVLVPGAVGVQVRFDHRT
EMQQDDRIVIRDPARRQPMAGRLAVATTLSQHADSGCWSGIGMDAPMLEG
CNLLRDG
back to top