prot_Ecto-sp13_S_contig69.17873.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69.17873.1
Unique Nameprot_Ecto-sp13_S_contig69.17873.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length296
Homology
BLAST of mRNA_Ecto-sp13_S_contig69.17873.1 vs. uniprot
Match: A0A6H5L1V5_9PHAE (BTP domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V5_9PHAE)

HSP 1 Score: 414 bits (1064), Expect = 2.720e-143
Identity = 214/226 (94.69%), Postives = 218/226 (96.46%), Query Frame = 0
Query:    1 MPPRRAYRGRCQVACSTMTNSKDEGEVDSAEFARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWTELRDFAFSEDGYSNRYENAASSGSGSAAPAAXXXXXXRAAGGGRQELPKRWDQPFHHAVPPFPMPRKRAAPWDDAEDGEEGATEGPRSRPPHIPAFMPPLPPSTSRGASAGSDRSLAEV 226
            M P RAY GRCQVACSTMTNSKDEGEVDSA+FARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWTELRDFAFSEDGYSNRY+NAASSGSGSAAPAA XXXXXRAAGGGRQELPKRWDQPFHHAVPPFPMPRKRAAPWD  E+GEE ATEGPRSRPPHIPAFMPPLPPST RGASAGSDRSLAE+
Sbjct:    1 MSPPRAYLGRCQVACSTMTNSKDEGEVDSAQFARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWTELRDFAFSEDGYSNRYDNAASSGSGSAAPAANXXXXXRAAGGGRQELPKRWDQPFHHAVPPFPMPRKRAAPWDHGEEGEEAATEGPRSRPPHIPAFMPPLPPSTKRGASAGSDRSLAEI 226          
BLAST of mRNA_Ecto-sp13_S_contig69.17873.1 vs. uniprot
Match: A0A5B7BZ13_DAVIN (Putative transcription initiation factor TFIID subunit 8 (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BZ13_DAVIN)

HSP 1 Score: 57.0 bits (136), Expect = 7.130e-6
Identity = 27/82 (32.93%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   19 TNSKDEGEVDSAEFARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQM 100
            T +  E ++D  EF   + + AVA +C ++GF A  + AL+ LTD+  RY++T+AK    +   +GRT+ N+ D++   +++
Sbjct:    1 TLTSQEPKLDPPEFLFAIRRIAVAQICQSVGFKACQSSALETLTDITARYLQTLAKYAAASAAASGRTQSNLIDIVFALEEL 82          
BLAST of mRNA_Ecto-sp13_S_contig69.17873.1 vs. uniprot
Match: A0A6A4L2F3_9ERIC (BTP domain-containing protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4L2F3_9ERIC)

HSP 1 Score: 56.6 bits (135), Expect = 2.110e-5
Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 0
Query:   20 NSKDEGEVDSAEFARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQM 100
            N + + +  S +FAR ++K AVA VC ++GF      AL+ L+DV  RY+  + K     +  AGR E N+ D++QG + +
Sbjct:   49 NERSKTKNQSDDFARAISKIAVAQVCESVGFQIFQQSALNTLSDVAVRYIRDIGKTANNYSNLAGRAESNVFDIIQGLEDL 129          
BLAST of mRNA_Ecto-sp13_S_contig69.17873.1 vs. uniprot
Match: UPI001CB97E06 (transcription initiation factor TFIID subunit 8-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB97E06)

HSP 1 Score: 55.5 bits (132), Expect = 2.240e-5
Identity = 27/91 (29.67%), Postives = 52/91 (57.14%), Query Frame = 0
Query:   17 TMTNSKDEGEVDSAEFARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWT 107
            T+++        S++F   + K AV  +C + G+ A    AL+ LT++  RY++++AK  + +    GRTE N+ DV++GF+ +   + +T
Sbjct:   10 TLSSQSQLNLFQSSDFHTAVAKIAVTQICKSAGYAAAQTTALETLTNITVRYLQSIAKSAVISAVSTGRTECNLYDVIRGFEDLHYDVGFT 100          
BLAST of mRNA_Ecto-sp13_S_contig69.17873.1 vs. uniprot
Match: A0A3P8WEG8_CYNSE (TATA-box binding protein associated factor 3 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WEG8_CYNSE)

HSP 1 Score: 55.8 bits (133), Expect = 4.910e-5
Identity = 31/81 (38.27%), Postives = 49/81 (60.49%), Query Frame = 0
Query:   32 FARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWTELRDF 112
            +AR L + +VA +C A+G+ A    A D L+DV+QRY++ MA+     +   GRT+P + D+ Q F+ +   LS  EL D+
Sbjct:    5 YARSLLRVSVAQICQALGWDAVQLTACDLLSDVLQRYIQQMARACHRYSELYGRTDPVMDDISQAFRLLGVSLS--ELEDY 83          
BLAST of mRNA_Ecto-sp13_S_contig69.17873.1 vs. uniprot
Match: A0A8B7XL27_ACAPL (transcription initiation factor TFIID subunit 3-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XL27_ACAPL)

HSP 1 Score: 55.8 bits (133), Expect = 5.000e-5
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0
Query:   31 EFARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWTE 108
            E+ R L K AVA +C  +G+ A      D LTDV+QRY+E +A+ +     + GRT+PN+ DV   F  M+  L+  E
Sbjct:    4 EYCRSLLKVAVAQLCQGLGWHAIHTTPCDLLTDVLQRYLEHLARHSHRYAEQYGRTDPNLDDVGLAFSHMQVRLNELE 81          
BLAST of mRNA_Ecto-sp13_S_contig69.17873.1 vs. uniprot
Match: A0A8C4R002_EPTBU (BTP domain-containing protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4R002_EPTBU)

HSP 1 Score: 55.5 bits (132), Expect = 6.480e-5
Identity = 31/81 (38.27%), Postives = 46/81 (56.79%), Query Frame = 0
Query:   32 FARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWTELRDF 112
            ++R + + A A +C ++G+ A    A+D LTDV+QRY+E +A+         GRT P++ D  Q FQ M   L   EL DF
Sbjct:    5 YSRAVLRVAAAQICQSLGWDAVQVSAVDILTDVLQRYIEQLARCCHRYGELYGRTNPDVEDAGQAFQLMGVNL--VELEDF 83          
BLAST of mRNA_Ecto-sp13_S_contig69.17873.1 vs. uniprot
Match: A0A3Q3JAR3_MONAL (TATA-box binding protein associated factor 3 n=2 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3JAR3_MONAL)

HSP 1 Score: 55.5 bits (132), Expect = 6.540e-5
Identity = 32/81 (39.51%), Postives = 49/81 (60.49%), Query Frame = 0
Query:   32 FARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWTELRDF 112
            +AR L + +VA +C A+G+ A    A D L+DV+QRYV+ +A+     +   GRT+P + DV Q F+ +   LS  EL D+
Sbjct:    5 YARSLLRVSVAQICQALGWDAVQVTACDLLSDVLQRYVQQLARVCHRYSELYGRTDPVLDDVSQAFRLLGVSLS--ELEDY 83          
BLAST of mRNA_Ecto-sp13_S_contig69.17873.1 vs. uniprot
Match: A0A553QX38_9TELE (BTP domain-containing protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QX38_9TELE)

HSP 1 Score: 53.5 bits (127), Expect = 8.060e-5
Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 0
Query:   32 FARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWTELRDF 112
            FAR + + AVA +C A+G+ A    A D L+DV++RYV+ +A+     +   GRT+P + DV Q F  +   +S  EL D+
Sbjct:    5 FARSVLRVAVAQMCQAVGWDAVQLSACDLLSDVLERYVQQLARSCHRYSELYGRTDPVLSDVDQAFGLLGVSIS--ELEDY 83          
BLAST of mRNA_Ecto-sp13_S_contig69.17873.1 vs. uniprot
Match: UPI0014553324 (transcription initiation factor TFIID subunit 3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553324)

HSP 1 Score: 55.1 bits (131), Expect = 8.870e-5
Identity = 31/78 (39.74%), Postives = 44/78 (56.41%), Query Frame = 0
Query:   31 EFARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWTE 108
            E+ R L K AVA +C  +G+ A      D LTDV+QRY+E +A+ +     + GRT+PN+ DV   F  M   L+  E
Sbjct:    4 EYCRSLLKVAVAQLCQGLGWHAVHTTPCDLLTDVLQRYLEHLARHSHRYAEQYGRTDPNLDDVGLTFSHMHVRLNELE 81          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69.17873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L1V5_9PHAE2.720e-14394.69BTP domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A5B7BZ13_DAVIN7.130e-632.93Putative transcription initiation factor TFIID sub... [more]
A0A6A4L2F3_9ERIC2.110e-535.80BTP domain-containing protein (Fragment) n=1 Tax=R... [more]
UPI001CB97E062.240e-529.67transcription initiation factor TFIID subunit 8-li... [more]
A0A3P8WEG8_CYNSE4.910e-538.27TATA-box binding protein associated factor 3 n=1 T... [more]
A0A8B7XL27_ACAPL5.000e-539.74transcription initiation factor TFIID subunit 3-li... [more]
A0A8C4R002_EPTBU6.480e-538.27BTP domain-containing protein n=1 Tax=Eptatretus b... [more]
A0A3Q3JAR3_MONAL6.540e-539.51TATA-box binding protein associated factor 3 n=2 T... [more]
A0A553QX38_9TELE8.060e-538.27BTP domain-containing protein n=1 Tax=Danionella t... [more]
UPI00145533248.870e-539.74transcription initiation factor TFIID subunit 3-li... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006565Bromodomain associated domainSMARTSM0057617neu3coord: 30..106
e-value: 2.7E-15
score: 66.8
IPR006565Bromodomain associated domainPFAMPF07524Bromo_TPcoord: 31..100
e-value: 3.0E-16
score: 59.2
IPR009072Histone-foldGENE3D1.10.20.10coord: 26..117
e-value: 2.8E-19
score: 70.6
NoneNo IPR availablePANTHERPTHR46338:SF1coord: 22..105
NoneNo IPR availablePANTHERPTHR46338:SF1coord: 159..228
IPR037818Transcription initiation factor TFIID subunit 8PANTHERPTHR46338FAMILY NOT NAMEDcoord: 22..105
IPR037818Transcription initiation factor TFIID subunit 8PANTHERPTHR46338FAMILY NOT NAMEDcoord: 159..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69contigEcto-sp13_S_contig69:4651..9351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69.17873.1mRNA_Ecto-sp13_S_contig69.17873.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69 4651..9351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69.17873.1 ID=prot_Ecto-sp13_S_contig69.17873.1|Name=mRNA_Ecto-sp13_S_contig69.17873.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=296bp
MPPRRAYRGRCQVACSTMTNSKDEGEVDSAEFARILTKQAVAHVCVAIGF
TATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQM
RTPLSWTELRDFAFSEDGYSNRYENAASSGSGSAAPAANGSGGARAAGGG
RQELPKRWDQPFHHAVPPFPMPRKRAAPWDDAEDGEEGATEGPRSRPPHI
PAFMPPLPPSTSRGASAGSDRSLAEVDPTGEIKAAASRRDGSKKSRGSRG
CCWSSGRGKYLRRLRRRRRAVSIRLFRARGRSFQREIWGHQQNYYQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006565BTP
IPR009072Histone-fold
IPR037818TAF8