prot_Ecto-sp13_S_contig69.17872.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69.17872.1
Unique Nameprot_Ecto-sp13_S_contig69.17872.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length264
Homology
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BLAST of mRNA_Ecto-sp13_S_contig69.17872.1 vs. uniprot
Match: D7FJ84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ84_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 1.260e-125
Identity = 224/263 (85.17%), Postives = 226/263 (85.93%), Query Frame = 0 
Query:    1 MDRFASMHDEDIDKLGIPNQGGARGGGGEGGWKGRKRARELSQLKDRLDRASEKEQQSWDLLKQAVGKGGGAAAGEGRFKATGTNRAAEEMRERTVGLVTAEEFRKAREAADSLEEAEAKRRQEEEAVAEEARETARRTAERKKXXXXXXXXXLQKSKMSFALEEXXXXXXAESSGNRVGPQRTDPTSLGAGKPAGSPGCTAVEKEGGDDRPSILPSGQGITTNRDGCGGGMSESRSFKGAAPDEENSSAAAKLRERLGRDQP 263
            MDRFASMHDEDIDKLGIPNQGGARGGGGEGGWKGRKRARELSQLKDRLDRASEKEQQSWDLLKQAVGKGGGAAA EGRFKATGTNRAAEEMRERTVGLVTAEEFRKAREAADSLEEAEAKRR                      XXXXXXXXX   SKMSFALEE  XX  AESSGNRVGPQRTDP SL AGKPAGS GCTAVEK+GGDD+PSI PSG GIT NRDGCGGGMSESRS KGAAPDEENSSAAAKLRERLGRDQP
Sbjct:    1 MDRFASMHDEDIDKLGIPNQGGARGGGGEGGWKGRKRARELSQLKDRLDRASEKEQQSWDLLKQAVGKGGGAAADEGRFKATGTNRAAEEMRERTVGLVTAEEFRKAREAADSLEEAEAKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKMSFALEEDEXXE-AESSGNRVGPQRTDPASLAAGKPAGSLGCTAVEKDGGDDKPSIPPSGHGITKNRDGCGGGMSESRSLKGAAPDEENSSAAAKLRERLGRDQP 262
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69.17872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJ84_ECTSI1.260e-12585.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..157
IPR007005XAP5 proteinPANTHERPTHR12722XAP-5 PROTEIN-RELATEDcoord: 47..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69contigEcto-sp13_S_contig69:500..4324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69.17872.1mRNA_Ecto-sp13_S_contig69.17872.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69 315..4554 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69.17872.1 ID=prot_Ecto-sp13_S_contig69.17872.1|Name=mRNA_Ecto-sp13_S_contig69.17872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp
MDRFASMHDEDIDKLGIPNQGGARGGGGEGGWKGRKRARELSQLKDRLDR
ASEKEQQSWDLLKQAVGKGGGAAAGEGRFKATGTNRAAEEMRERTVGLVT
AEEFRKAREAADSLEEAEAKRRQEEEAVAEEARETARRTAERKKRKSEAK
KKRLQKSKMSFALEEDEDEEEAESSGNRVGPQRTDPTSLGAGKPAGSPGC
TAVEKEGGDDRPSILPSGQGITTNRDGCGGGMSESRSFKGAAPDEENSSA
AAKLRERLGRDQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007005XAP5