prot_Ecto-sp13_S_contig6899.17871.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6899.17871.1
Unique Nameprot_Ecto-sp13_S_contig6899.17871.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length549
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6899.17871.1 vs. uniprot
Match: A0A6H5K099_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K099_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 3.990e-27
Identity = 146/186 (78.49%), Postives = 148/186 (79.57%), Query Frame = 0 
Query:    1 MKQSPATATGGAAXXXXXXXXXXXXXXXXXXXXXXXXXDGSGNAPQMASLCLERMVVAFSTPMGGADGERHTATSSRTTAGRRNGLPVQHYHHSRPPAGTRPSTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPGSPSGRSXXXXXXXXDEPVSVAEDEEGKDRSKERSTESSSRFPSGRSRG 186
            MKQSPATA GGA XX  XXXXXXXXXXXXXXXX     DGSGNAPQMASLCLERMVVAFSTPMGGADGER TA +SRTTAGRRNGLPVQH+H             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXX  PVSVAEDEEGKD SKERSTESS R PSGRSRG
Sbjct:    1 MKQSPATAGGGAGXXRAXXXXXXXXXXXXXXXXGK---DGSGNAPQMASLCLERMVVAFSTPMGGADGERPTAAASRTTAGRRNGLPVQHFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PVSVAEDEEGKDHSKERSTESSFRSPSGRSRG 181
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BLAST of mRNA_Ecto-sp13_S_contig6899.17871.1 vs. uniprot
Match: D7G7E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E6_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 3.900e-24
Identity = 81/94 (86.17%), Postives = 82/94 (87.23%), Query Frame = 0 
Query:    1 MKQSPATATGGAAXXXXXXXXXXXXXXXXXXXXXXXXXDGSGNAPQMASLCLERMVVAFSTPMGGADGERHTATSSRTTAGRRNGLPVQHYHHS 94
            MKQSPATA G   XXXXXXXXXXXXXXXXXXX      DGSGNAPQMASLCLERMVVAFSTPMGGADGER TA +SRTTAGRRNGLPVQHYHHS
Sbjct:    1 MKQSPATAAGXXXXXXXXXXXXXXXXXXXXXXSGRGGKDGSGNAPQMASLCLERMVVAFSTPMGGADGERPTAAASRTTAGRRNGLPVQHYHHS 94
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6899.17871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K099_9PHAE3.990e-2778.49Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G7E6_ECTSI3.900e-2486.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 433..453

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6899contigEcto-sp13_S_contig6899:4687..7438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6899.17871.1mRNA_Ecto-sp13_S_contig6899.17871.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6899 4687..7438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6899.17871.1 ID=prot_Ecto-sp13_S_contig6899.17871.1|Name=mRNA_Ecto-sp13_S_contig6899.17871.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=549bp
MKQSPATATGGAAGGGGGRASAASGGSSGSSGSGRGGKDGSGNAPQMASL
CLERMVVAFSTPMGGADGERHTATSSRTTAGRRNGLPVQHYHHSRPPAGT
RPSTTSHTPRAAAAAAAAAWLQEAEAAGAAAATSNLPGSPSGRSHGGGGG
EQDEPVSVAEDEEGKDRSKERSTESSSRFPSGRSRGGGGSSGGETAPAAA
AAAAAGGEGNAEEKDDGHSAKRRKRTSDAAAAAAEGGGDGKGEDGDAADD
DDAVDAAAAAAGEATAAAAAAAAEGGRGDCVGASPPAASSKKKGKGKARG
TQLSSSSPGGGATGAAAAGTAGTRTGEVTPSASAPASSPPPAAACRESER
GAGGGGGNTGVEIKTEVGGGGDGDGGDRVEERGEDEDALARLKTGSPPSV
PAAAAAAAGPATAVEPDPMDEDEEGEQEDEEDEDEDEEDEEDEEDEDDEE
EEEESSGGSGGRGVGGSGRAASTSGGGGGWGDLFTALGRTEVSSSGGGGG
GGGEDGARSVVLAGGLEAWQVAFVLEVADGAVLSAWSKTLGDSVAALES
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