prot_Ecto-sp13_S_contig6898.17869.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6898.17869.1
Unique Nameprot_Ecto-sp13_S_contig6898.17869.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length219
Homology
BLAST of mRNA_Ecto-sp13_S_contig6898.17869.1 vs. uniprot
Match: D8LDU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU9_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 6.900e-121
Identity = 213/219 (97.26%), Postives = 213/219 (97.26%), Query Frame = 0
Query:    1 MYLIKWKNLSYLHNSWEMAAHLQDPRHPSNRQKLLRFNNKMEQEHGPQWRKVMEDEDAEEGAAEKEYYPSDMAEVQRIVTCEVTSTAHEAVLRKERHDMLSGDSAXXXXXXXXXXXXXXXXXXXXXXXXSDPDSLVLYLVKWRGLPYDQCSWEHFKDIRFASDQILDFWDFCRPRPEEMAEVNAQLSAGGKGKGGGVRGGGETLKGHNLRVRDFTKLMT 219
            MYLIKWKNLSYLHNSWEMAAHLQDPRHPSNRQKLLRFNNKMEQEHGPQWRKVMEDEDAEEGAAEKEYYPSDMAEVQRIVTCE TSTAHEAVLRKERHDMLSGDSAXXXXXXXXXXXXXXXXXXXX    SDPDSLVLYLVKWRGLPYDQCSWEHFKDIRFASDQILDFWDFCRPRPEEMAEVNAQLSAGGKGKGGGVRGGGE LKGHNLRVRDFTKLMT
Sbjct:  458 MYLIKWKNLSYLHNSWEMAAHLQDPRHPSNRQKLLRFNNKMEQEHGPQWRKVMEDEDAEEGAAEKEYYPSDMAEVQRIVTCEATSTAHEAVLRKERHDMLSGDSAXXXXXXXXXXXXXXXXXXXXD---SDPDSLVLYLVKWRGLPYDQCSWEHFKDIRFASDQILDFWDFCRPRPEEMAEVNAQLSAGGKGKGGGVRGGGEALKGHNLRVRDFTKLMT 673          
BLAST of mRNA_Ecto-sp13_S_contig6898.17869.1 vs. uniprot
Match: A0A6H5KVU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU7_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 1.170e-92
Identity = 171/177 (96.61%), Postives = 171/177 (96.61%), Query Frame = 0
Query:    1 MYLIKWKNLSYLHNSWEMAAHLQDPRHPSNRQKLLRFNNKMEQEHGPQWRKVMEDEDAEEGAAEKEYYPSDMAEVQRIVTCEVTSTAHEAVLRKERHDMLSGDSAXXXXXXXXXXXXXXXXXXXXXXXXSDPDSLVLYLVKWRGLPYDQCSWEHFKDIRFASDQILDFWDFCRPRPE 177
            MYLIKWKNLSYLHNSWEMAAHLQDPRHPSNRQKLLRFNNKMEQEHGPQWRKVMEDEDAEEGAAEKEYYPSDMAEVQRIVTCE TSTAHEAVLRKERHDMLSGDSA XXXXXXXXXXXXXXXXXXX    SDPDSLVLYLVKWRGLPYDQCSWEHFKDIRFASDQILDFWDFCRPRPE
Sbjct:  465 MYLIKWKNLSYLHNSWEMAAHLQDPRHPSNRQKLLRFNNKMEQEHGPQWRKVMEDEDAEEGAAEKEYYPSDMAEVQRIVTCESTSTAHEAVLRKERHDMLSGDSAAXXXXXXXXXXXXXXXXXXX----SDPDSLVLYLVKWRGLPYDQCSWEHFKDIRFASDQILDFWDFCRPRPE 637          
BLAST of mRNA_Ecto-sp13_S_contig6898.17869.1 vs. uniprot
Match: A0A448Z3J7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3J7_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.620e-17
Identity = 63/215 (29.30%), Postives = 99/215 (46.05%), Query Frame = 0
Query:    1 MYLIKWKNLSYLHNSWEMAAHL--QDPRHPSNRQKLLRFNNKMEQEHGPQWRKVMEDE------------------------DAEEGAAEKEYYPSDMAEVQRIVTCEVTSTAHEAVLRKERHDMLSGDSAXXXXXXXXXXXXXXXXXXXXXXXXS---DPDSLVLYLVKWRGLPYDQCSWEHFKDIRF-ASDQILDFWDFCRPRPEEMAEVNAQ 185
            +YLIKW+  SYLHNSWE  + +   DP + + R K+ ++N   E   G  W+KV+E+E                        D  +   ++E+YP    EV+RI+ C+  S    ++  K+R   +  D                              DP+  V Y+VKW+GLP+ + +WE++KDI+  A+D+  DFW   +P  EE    N+Q
Sbjct:  490 VYLIKWRGKSYLHNSWERGSDIIRTDPTNNTARSKIRKYNQAQEIALGIHWKKVIEEERKASNATALHDPVPATNVDTEGKMDTPQEEPDEEFYPPANTEVERILACD-ESEMDLSLYAKQRALNILDDQEQMKQKESGTTKLWNSKEGLKEILTEIPWDPEDNVRYVVKWKGLPFAEITWEYWKDIKTDATDEAEDFWIRQQPPDEETLARNSQ 703          
BLAST of mRNA_Ecto-sp13_S_contig6898.17869.1 vs. uniprot
Match: A0A4D9D793_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D793_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.870e-15
Identity = 60/183 (32.79%), Postives = 90/183 (49.18%), Query Frame = 0
Query:    2 YLIKWKNLSYLHNSWEMAAHL--QDPRHPSNRQKLLRFNNKMEQEHGPQWRKVMEDEDAEEGAAEKEYYPSDMAEVQRIVTCEVTSTAHEAVLR---KERHDML----SGDSAXXXXXXXXXXXXXXXXXXXXXXXXSDPDSLVLYLVKWRGLPYDQCSWEHFKDIR-FASDQILDFWDFCRP 174
            +L+KWK+ SYLH  WE  A L  QD    S  QKL RF  +M +  GP WR+V+ ++  E      ++   ++ EV R++ CE      + ++R   ++RH +L    +G++                            D  V YLVKWRGLPY + SWE + DI+ FA +++  FW   RP
Sbjct:  604 WLVKWKDKSYLHVRWETRAGLLRQDS---SADQKLKRFEKQMVKLRGPAWREVLLEDRRENPKESPDWIEPEVTEVHRVIACETGYVNLQVLVRQVRRKRHALLVDEQAGEAGRDGAMGQALPVPLPPLTPAEEMENHQHDR-VRYLVKWRGLPYAEASWEKWADIKDFAYEEVGLFWVLQRP 782          
BLAST of mRNA_Ecto-sp13_S_contig6898.17869.1 vs. uniprot
Match: A0A7S4QWE4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QWE4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 5.910e-13
Identity = 63/217 (29.03%), Postives = 97/217 (44.70%), Query Frame = 0
Query:    1 MYLIKWKNLSYLHNSWEMAAHLQ--DPRHPSN--RQKLLRFNNKMEQEHGPQWRKVMEDE-------------DA------EEGAAEKEYYPSDMAEVQRIVTCEVTSTAHEAVLRKERHDMLSGDSAXXXXXXXXXXXXXXXXXXXXXXXXS-------DPDSLVLYLVKWRGLPYDQCSWEHFKDIRFAS-DQILDFWDFCRPRPEEMAEVNAQL 186
            +YL+KW+  S+LH SWE    L+  DP   +N  R KL R+    E ++G  W+ V+E+E             DA      E+   E+E++     EV+R++ C+  S    +VL K+R   L  +S                                 DP+  V Y++KW+GL + + +WE++KDI+    DQ+ DFW   R R     EV   L
Sbjct:  399 VYLVKWRGKSHLHCSWERKRDLEKMDPSSNTNTARGKLKRYVQSQEVQYGKNWKLVLEEERRVSSVPTKKEENDAPTGDSKEDEIVEEEFFLPTFTEVERVLACD-ESEMDTSVLAKQRALNLKAESEQLRLKEHEKEDSGNDRTTTSLIPKKEEKEEAWDPEDNVRYVIKWKGLQFQEMTWEYWKDIKHDFVDQVEDFW--LRQRAPNTNEVTMIL 612          
BLAST of mRNA_Ecto-sp13_S_contig6898.17869.1 vs. uniprot
Match: A0A7S2K2U9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2U9_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.270e-12
Identity = 57/199 (28.64%), Postives = 89/199 (44.72%), Query Frame = 0
Query:    3 LIKWKNLSYLHNSWEMAAHL--QDPRHPSNRQKLLRFNNKMEQEHGPQWRKVMEDEDAEEGAAEKEYYPSDMAEVQRIVTCEVTSTA---------------HEAVLRKERHDMLSGDSAXXXXXXXXXXXXXXXXXXXXXXXXS-DPDSLVLYLVKWRGLPYDQCSWEHFKDIRFAS-DQILDFWDFCRPRPEEMAEV 182
            LIKW+  SY+H SWE+   L   DP + + + KL R+   +E   GP W+KV+ D        E++Y+P    EV+RI+  + T                   EA+  KE  +    ++                         + DP+  V Y+VKW+GLP  + +WE++KDI+    D++ D+W   R R    AE 
Sbjct:   23 LIKWRGRSYMHCSWELPEDLIRLDPTNTA-KGKLKRYFQSLEISMGPFWKKVLSDTQT---GVEEDYFPPTYVEVERILASDETEMDLNIFAKQRGENRRLDKEALREKELAETADSEARGNCAPAPQCVVNDNAEKPTENGKQTWDPEDYVRYVVKWKGLPAAEMTWEYWKDIKADFVDEVEDYW--LRQRRPTAAET 215          
BLAST of mRNA_Ecto-sp13_S_contig6898.17869.1 vs. uniprot
Match: A0A1Z5JDN6_FISSO (Chromodomain-helicase-DNA-binding protein 6 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDN6_FISSO)

HSP 1 Score: 75.1 bits (183), Expect = 5.200e-12
Identity = 55/198 (27.78%), Postives = 90/198 (45.45%), Query Frame = 0
Query:    3 LIKWKNLSYLHNSWEMA---AHLQDPRHPSNRQKLLRFNNKMEQEHGPQWRKVM--EDEDAEEGAAE-----KEYYPSDMAEVQRIVTCE-------VTSTAHEAVLRKERHDMLSGDSAXXXXXXXXXXXXXXXXXXXXXXXXSDPDSLVLYLVKWRGLPYDQCSWEHFKDI-RFASDQILDFWDFCRPRPEEMAEV 182
            LIKW+  S+LH SWE A     L    + + R K+ R+  + E   G  W+ +M  + E   +   +     +EY+  D  E++RI  C+       V +    A L +E+  +   DS                          DP+  V Y+VKW+G+P+ + +WE+++DI R A D+  DFW   +P P +  E+
Sbjct:  341 LIKWRGRSHLHCSWERADDVIRLDSSNNSTARNKIRRYYQEQEASIGLNWKSIMLADRESTTQMHGQFLEPAEEYFGGDCLEIERITACDENEMDMSVLAKQRAANLIEEQETLQKKDSEAIKVSEETLYQHLVKDVDLENDIPWDPEDNVRYVVKWKGMPFTEMTWEYWRDIKRDAVDEAEDFWYRQKP-PNDYREL 537          
BLAST of mRNA_Ecto-sp13_S_contig6898.17869.1 vs. uniprot
Match: A0A482SLZ8_9ARCH (Chromo domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLZ8_9ARCH)

HSP 1 Score: 70.1 bits (170), Expect = 3.900e-11
Identity = 45/132 (34.09%), Postives = 66/132 (50.00%), Query Frame = 0
Query:   53 MEDEDAEE-GAAEKE---YYPSDMAEVQRIVTCEVTSTAHEAVLRKERHDMLSGDSAXXXXXXXXXXXXXXXXXXXXXXXXSDPDSLVLYLVKWRGLPYDQCSWEHFKDIRFASDQILDFWDFCRPRPEEMA 180
            ++DEDA   G A+ E   YY  +M EVQRI++C    T+H    R +  D+LS                            +DP+S V YLVKWRGL YD+C+WE +++++    ++  FW   RP P  +A
Sbjct:   21 LQDEDASNSGNADDEEFDYYNPEMVEVQRIISCNTIETSHAQAKRPQ--DLLS--------------TKRKRKADIEDAEEADPESEVRYLVKWRGLSYDECTWERWEELKDWYSEVWLFWRTQRP-PRNLA 135          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6898.17869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LDU9_ECTSI6.900e-12197.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVU7_9PHAE1.170e-9296.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A448Z3J7_9STRA2.620e-1729.30Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A4D9D793_9STRA1.870e-1532.79Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4QWE4_9STRA5.910e-1329.03Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2K2U9_9STRA3.270e-1228.64Hypothetical protein (Fragment) n=2 Tax=Leptocylin... [more]
A0A1Z5JDN6_FISSO5.200e-1227.78Chromodomain-helicase-DNA-binding protein 6 n=2 Ta... [more]
A0A482SLZ8_9ARCH3.900e-1134.09Chromo domain-containing protein n=1 Tax=archaeon ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 71..173
e-value: 1.3E-5
score: 34.7
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 1..49
score: 10.349
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 73..170
score: 8.576
IPR023780Chromo domainPFAMPF00385Chromocoord: 131..170
e-value: 1.7E-9
score: 37.4
coord: 1..24
e-value: 3.9E-7
score: 29.9
NoneNo IPR availableGENE3D2.40.50.40coord: 123..169
e-value: 4.8E-11
score: 44.0
NoneNo IPR availableGENE3D2.40.50.40coord: 1..49
e-value: 4.2E-9
score: 38.5
NoneNo IPR availablePANTHERPTHR45623:SF11KISMET, ISOFORM Ccoord: 1..172
NoneNo IPR availablePANTHERPTHR45623FAMILY NOT NAMEDcoord: 1..172
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 1..30
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 65..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6898contigEcto-sp13_S_contig6898:901..4246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6898.17869.1mRNA_Ecto-sp13_S_contig6898.17869.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6898 883..4246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6898.17869.1 ID=prot_Ecto-sp13_S_contig6898.17869.1|Name=mRNA_Ecto-sp13_S_contig6898.17869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
MYLIKWKNLSYLHNSWEMAAHLQDPRHPSNRQKLLRFNNKMEQEHGPQWR
KVMEDEDAEEGAAEKEYYPSDMAEVQRIVTCEVTSTAHEAVLRKERHDML
SGDSAAAAGSAAGAAGAAPAAGGNDDDDDSDPDSLVLYLVKWRGLPYDQC
SWEHFKDIRFASDQILDFWDFCRPRPEEMAEVNAQLSAGGKGKGGGVRGG
GETLKGHNLRVRDFTKLMT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR023780Chromo_domain
IPR016197Chromo-like_dom_sf