prot_Ecto-sp13_S_contig6895.17868.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6895.17868.1
Unique Nameprot_Ecto-sp13_S_contig6895.17868.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6895.17868.1 vs. uniprot
Match: D7FXT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT9_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.660e-37
Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 0 
Query:    1 PRNEHQLQQPSPKDHRRTFSLVSSRSTHSASVGVAEPSVGVTAVDHVSGTAMQENPASSHGMD--ADDSWKELTDNEGQGATRSRDVKG 87
            PR  HQLQQP+PKDHRR FSLVSSRSTHSASVGVAEPSVGV A DHVSG+AMQ NPASSHG+D  ADDSWKELTD+EGQGATRSRDVKG
Sbjct:  571 PRKAHQLQQPNPKDHRRAFSLVSSRSTHSASVGVAEPSVGVAAADHVSGSAMQGNPASSHGVDGSADDSWKELTDSEGQGATRSRDVKG 659
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BLAST of mRNA_Ecto-sp13_S_contig6895.17868.1 vs. uniprot
Match: A0A6H5L4P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4P3_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.430e-31
Identity = 69/87 (79.31%), Postives = 76/87 (87.36%), Query Frame = 0 
Query:    1 PRNEHQLQQPSPKDHRRTFSLVSSRSTHSASVGVAEPSVGVTAVDHVSGTAMQENPASSHGMD--ADDSWKELTDNEGQGATRSRDV 85
            P N HQLQQPSPKDHRRTFSL+SSRSTH+A VGVAEPSVGV   D VSGTAMQ NPASSHG+D  AD+SWK+LTD+E +GATRSRDV
Sbjct:  552 PCNAHQLQQPSPKDHRRTFSLMSSRSTHTALVGVAEPSVGVAVGDQVSGTAMQGNPASSHGVDGSADNSWKDLTDDESEGATRSRDV 638
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6895.17868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXT9_ECTSI1.660e-3786.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4P3_9PHAE1.430e-3179.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6895contigEcto-sp13_S_contig6895:7098..7358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6895.17868.1mRNA_Ecto-sp13_S_contig6895.17868.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6895 7098..7358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6895.17868.1 ID=prot_Ecto-sp13_S_contig6895.17868.1|Name=mRNA_Ecto-sp13_S_contig6895.17868.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
PRNEHQLQQPSPKDHRRTFSLVSSRSTHSASVGVAEPSVGVTAVDHVSGT
AMQENPASSHGMDADDSWKELTDNEGQGATRSRDVKG
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